GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005269-TA|BGIBMGA005269-PA|undefined
         (1087 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              27   1.1  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              26   1.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    25   4.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   4.4  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    25   4.4  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    25   4.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              24   5.8  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 715 KVKSRLDCFKKYRTLYQIYN 734
           K+   L+CF KY+T+ QI N
Sbjct: 115 KISKILECFFKYKTINQILN 134


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 689 IKYVQDITDDAEERKQMVDKFKAQID-----KVKSRLDCFKKYRTLYQIYNE 735
           ++ + +I  D  E  +++ +  A  D     K    + CF KY+TL +I NE
Sbjct: 84  VREIAEIYLDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 261 LKPNIINGAYPNVEHYLDVQFKLLREDYFGPL 292
           L+PN ++G Y  ++  +    K +RE   G L
Sbjct: 76  LRPNFLDGWYQTLQSAISAHMKKVREQMAGIL 107


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 10/86 (11%)

Query: 159 MVELCEGILNFGGNSEEYLQNIFELLEATEISALGVMEEHSERFSNELFDRIEKIKIRFA 218
           +V++CE  +        +L +    LEA + +   V+++HS     +L D +E + +   
Sbjct: 326 LVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHS-----QLIDTLENV-LAIV 379

Query: 219 EELSSKGQTITNETRINEDPNSFRNL 244
           + L  +    TN+  + E  ++F++L
Sbjct: 380 DRLMDE----TNQLTLQETADAFKDL 401


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 261 LKPNIINGAYPNVEHYLDVQFKLLREDYFGPL 292
           L+PN ++G Y  ++  +    K +RE   G L
Sbjct: 76  LRPNFLDGWYQTLQSAISAHMKKVREQMAGIL 107


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 261 LKPNIINGAYPNVEHYLDVQFKLLREDYFGPL 292
           L+PN ++G Y  ++  +    K +RE   G L
Sbjct: 76  LRPNFLDGWYQTLQSAISAHMKKVREQMAGIL 107


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 687 NSIKYVQDITDDAEERKQMVDKFK---AQID-KVKSRLDCFKKYRTLYQIYN 734
           N+   VQ + DD E  + +V+      A +  K+     CF KY+T+  I N
Sbjct: 83  NTRDIVQAVLDDNETDQLIVECSPISDANVHIKISKIFQCFMKYKTITDILN 134


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,369
Number of Sequences: 429
Number of extensions: 13473
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 7
length of query: 1087
length of database: 140,377
effective HSP length: 65
effective length of query: 1022
effective length of database: 112,492
effective search space: 114966824
effective search space used: 114966824
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)