GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005266-TA|BGIBMGA005266-PA|IPR001128|Cytochrome P450
         (272 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.9  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   6.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 170 IVLAHG-LTSKEEKQWGRAKAFVPERWCDDGWQPLKASRAHHLASMPFGEK-CPGTGISI 227
           +VL H  +    E+ +  AK ++PERW      P        +A    G + CPG     
Sbjct: 418 VVLLHTWIAGLNEENFKDAKKYLPERWT----TPTTPHSPLLVAPFGAGRRICPGKRFVD 473

Query: 228 KMLTSLAARITERYRI 243
             L  + A+I   + I
Sbjct: 474 LALQLILAKIIREFEI 489


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 166 DEVDIVLAHGLTSKEEKQWGRAKAFVPERW 195
           D++   L     +K +K + R    +PERW
Sbjct: 300 DDIKSYLIQFFANKNQKFYERGIMMLPERW 329


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 3   EDKGVSSVLKSYNNMVQTLTIYFQIIL 29
           +D G   + KS + +V+T  IY+ + +
Sbjct: 191 KDDGTEGIAKSGDVLVETEPIYYNLTM 217


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.131    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,201
Number of Sequences: 429
Number of extensions: 2308
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 272
length of database: 140,377
effective HSP length: 57
effective length of query: 215
effective length of database: 115,924
effective search space: 24923660
effective search space used: 24923660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)