GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005263-TA|BGIBMGA005263-PA|IPR000073|Alpha/beta
hydrolase fold-1, IPR008262|Lipase, active site
         (270 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.95 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.95 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.2  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.8  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   5.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 54  IVLIRRIVKHFKW-EKVQLMGHSLGGALSFMYAASFPDDVDKIICIDIASPAVR 106
           I+L    V+  K  ++V L+   + GAL      ++PDD  +   + +  PA+R
Sbjct: 339 IILFNPEVRGLKSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIR 392


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 54  IVLIRRIVKHFKW-EKVQLMGHSLGGALSFMYAASFPDDVDKIICIDIASPAVR 106
           I+L    V+  K  ++V L+   + GAL      ++PDD  +   + +  PA+R
Sbjct: 339 IILFNPEVRGLKSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIR 392


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 8   QDNAGTWDNLIPLLPVNTSVL 28
           Q+  G W++L+P  P N +V+
Sbjct: 335 QNAVGCWNSLLPYSPENQAVV 355


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 76  LGGALSFMYAASFPDDVDKI 95
           LG   + M++A+FPD+V  +
Sbjct: 380 LGERQTLMFSATFPDEVQHL 399


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 168 PTPAHMNKKGYFFKRDPRLKVAGLAMMSIETALEFAGKVKC 208
           P P  + KK Y    D +LK+  +    ++  L++  ++ C
Sbjct: 31  PRPKPLLKKEYPLVMDTKLKIIEILQFILDVRLDY--RISC 69


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.139    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,175
Number of Sequences: 429
Number of extensions: 3139
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 270
length of database: 140,377
effective HSP length: 57
effective length of query: 213
effective length of database: 115,924
effective search space: 24691812
effective search space used: 24691812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)