Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005261-TA|BGIBMGA005261-PA|IPR005956|4-
hydroxyphenylpyruvate dioxygenase
(139 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11G7.05c |||[acyl-carrier protein] S-malonyltransferase Mct1... 27 1.4
SPAC27E2.05 |cdc1|mis1|DNA polymerase delta small subunit Cdc1|S... 25 4.3
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 25 4.3
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 25 5.7
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 24 7.5
SPBC6B1.08c |ofd1||2-oxoglutarate and Fe|Schizosaccharomyces pom... 24 7.5
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 24 7.5
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 24 9.9
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 24 9.9
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 24 9.9
>SPAC11G7.05c |||[acyl-carrier protein] S-malonyltransferase Mct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 318
Score = 26.6 bits (56), Expect = 1.4
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 46 RGAEIITWPSTYYEIIREKLTKSTVKVAESLTALQENNILIDFDERGYMLQAFTKHVQ 103
+G + TW Y E + ++T+K AE++T ++ +++ + + + Q T Q
Sbjct: 9 QGVDWKTWMQPYLE---NNIVQNTLKEAENVTEIEIRKYIVEAEAKSNLRQPITTIAQ 63
>SPAC27E2.05 |cdc1|mis1|DNA polymerase delta small subunit
Cdc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 25.0 bits (52), Expect = 4.3
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 70 VKVAESLTALQENNILIDFDERGYMLQA----FTKHVQARPTGFGAMNYKWVFEAIERLE 125
V+V S+ + + + ++ Y Q F + RP A + KW + +RLE
Sbjct: 2 VEVRHSIPCEETKRLELSLSQQTYSQQYASIYFARLTALRPRITEAASKKWPDK--QRLE 59
Query: 126 TAKDIKSDE 134
D+KSDE
Sbjct: 60 RVLDVKSDE 68
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 25.0 bits (52), Expect = 4.3
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 13 KASEFVKALGTSGVEHIALYTDDIVNTMQNLKKRGAEIITWP 54
K+ F + LG+ I T DI + K G +WP
Sbjct: 384 KSGNFEEILGSESHSSITEKTRDIAKNVATWLKNGENFSSWP 425
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 24.6 bits (51), Expect = 5.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 54 PSTYYEIIREKLTKSTVKVAESLTALQEN 82
P YE+I + + + V ES++AL++N
Sbjct: 574 PKQLYEVILQAVIDNRVVARESISALRKN 602
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 746
Score = 24.2 bits (50), Expect = 7.5
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 75 SLTALQENNILIDFDERGYMLQAFTKHVQARPTGFGAMNYK 115
S+TA + + + + R Y+LQ+ T AR NY+
Sbjct: 166 SITANEIARLCQEANNRNYLLQSLTSATDARRAFLNNPNYR 206
>SPBC6B1.08c |ofd1||2-oxoglutarate and Fe|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 515
Score = 24.2 bits (50), Expect = 7.5
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 30 ALYTDDIVNTMQNLKKRGAEIITWPSTYYEIIR-EKLTKSTVKV 72
A Y D+ V+T+Q+L + ++ +YY +++ E L+K +
Sbjct: 240 ANYCDNTVSTLQSLTMKQMDLELPRFSYYPVVKPEPLSKQDTDI 283
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 24.2 bits (50), Expect = 7.5
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 11 SSKASEFVKALGTSGVEHIALYTDDIVNTMQNLKKRGAEII 51
S K S L +G++H+ +Y + + ++++ K R EI+
Sbjct: 182 SIKLSMPADDLSKNGIKHLIIYKEKLRFSLESRKSRVDEIV 222
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 23.8 bits (49), Expect = 9.9
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 46 RGAEIITWPSTYYEII--REKLTKSTVKVAESLTALQENNILIDFDERGYMLQAFTKHVQ 103
R ++T Y + + K+ ++ K+ S L+E + FDE GY+ + KH+
Sbjct: 73 RNELVVTVSGNYKNVYTAKIKILQAIPKILISKLVLEEPLENLLFDEDGYVYEDTMKHLD 132
Query: 104 ARPTGFGAMNY 114
GA Y
Sbjct: 133 KITEITGAKIY 143
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 23.8 bits (49), Expect = 9.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 37 VNTMQNLKKRGAEIITWPSTYYEIIREKLTKSTVKVAESLTALQE 81
+ T+Q LKK+ + ST +EKL K V+V L E
Sbjct: 1054 ITTVQTLKKQKEFANQYDSTLLAQAQEKLEKLKVEVERRRRLLSE 1098
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 23.8 bits (49), Expect = 9.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 59 EIIREKLTKSTVKVAESLTALQENNILIDFDERG 92
E I EK TVK+ L + E N +DF + G
Sbjct: 16 EAILEKEIGETVKIEGDLVEVYEINRTVDFIKSG 49
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,138
Number of Sequences: 5004
Number of extensions: 21046
Number of successful extensions: 50
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 10
length of query: 139
length of database: 2,362,478
effective HSP length: 66
effective length of query: 73
effective length of database: 2,032,214
effective search space: 148351622
effective search space used: 148351622
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)
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