Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005251-TA|BGIBMGA005251-PA|IPR009072|Histone-fold
(148 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029430-1|AAH29430.1| 138|Homo sapiens apoptosis-inducing, TAF... 71 2e-12
AL354956-5|CAI19199.1| 138|Homo sapiens apoptosis-inducing, TAF... 71 2e-12
AL139424-5|CAI95755.1| 138|Homo sapiens apoptosis-inducing, TAF... 71 2e-12
AL354956-7|CAI19201.1| 164|Homo sapiens apoptosis-inducing, TAF... 65 1e-10
AL139424-7|CAI95757.1| 164|Homo sapiens apoptosis-inducing, TAF... 65 1e-10
AF521016-1|AAM70482.1| 164|Homo sapiens unknown protein. 65 1e-10
BC015202-1|AAH15202.2| 561|Homo sapiens CENPT protein protein. 38 0.010
BC007864-1|AAH07864.2| 160|Homo sapiens CENPT protein protein. 38 0.010
BC007642-1|AAH07642.1| 558|Homo sapiens CENPT protein protein. 38 0.010
AL354956-6|CAI19200.1| 77|Homo sapiens apoptosis-inducing, TAF... 36 0.073
AL139424-6|CAI95756.1| 77|Homo sapiens apoptosis-inducing, TAF... 36 0.073
AF516753-1|AAM61954.1| 77|Homo sapiens unknown protein. 36 0.073
AY333928-1|AAR13293.1| 408|Homo sapiens USP16 protein. 31 1.2
AL163249-3|CAB90432.1| 823|Homo sapiens human ubiquitin process... 31 1.2
AK222884-1|BAD96604.1| 823|Homo sapiens ubiquitin specific prot... 31 1.2
AK222681-1|BAD96401.1| 823|Homo sapiens ubiquitin specific prot... 31 1.2
AF126736-1|AAD20949.1| 823|Homo sapiens ubiquitin processing pr... 31 1.2
BC095479-1|AAH95479.1| 563|Homo sapiens coiled-coil domain cont... 31 1.6
BC030712-1|AAH30712.1| 495|Homo sapiens CCDC38 protein protein. 31 1.6
AK097408-1|BAC05038.1| 563|Homo sapiens protein ( Homo sapiens ... 31 1.6
BC030777-1|AAH30777.1| 822|Homo sapiens ubiquitin specific pept... 30 3.6
U30504-1|AAA84389.1| 264|Homo sapiens TAFII31 protein. 29 4.8
U25112-1|AAA91318.1| 264|Homo sapiens TBP-associated factor TAF... 29 4.8
U21858-1|AAC50153.1| 264|Homo sapiens TAFII32 precursor protein. 29 4.8
BT019652-1|AAV38458.1| 264|Homo sapiens TAF9 RNA polymerase II,... 29 4.8
BC033320-1|AAH33320.1| 264|Homo sapiens TAF9 protein protein. 29 4.8
BC003400-1|AAH03400.1| 264|Homo sapiens TAF9 RNA polymerase II,... 29 4.8
AY189986-1|AAN84793.1| 264|Homo sapiens TAF9 RNA polymerase II,... 29 4.8
BC045626-1|AAH45626.3| 471|Homo sapiens PBX/knotted 1 homeobox ... 29 6.3
AL160060-2|CAH71301.1| 1788|Homo sapiens supervillin protein. 29 6.3
AL160060-1|CAH71300.1| 2214|Homo sapiens supervillin protein. 29 6.3
AL158167-3|CAI15237.1| 2214|Homo sapiens supervillin protein. 29 6.3
AL158167-2|CAI15236.1| 1788|Homo sapiens supervillin protein. 29 6.3
AF109135-1|AAD14682.1| 2214|Homo sapiens archvillin protein. 29 6.3
AF051851-1|AAC64696.1| 1788|Homo sapiens supervillin protein. 29 6.3
AF051850-1|AAC64695.1| 1788|Homo sapiens supervillin protein. 29 6.3
Z70281-1|CAI42018.1| 954|Homo sapiens dystrophin related protei... 29 8.4
Z68331-3|CAI42016.1| 954|Homo sapiens dystrophin related protei... 29 8.4
U43519-1|AAC50538.1| 954|Homo sapiens dystrophin-related protei... 29 8.4
BC111695-1|AAI11696.2| 954|Homo sapiens dystrophin related prot... 29 8.4
BC071649-1|AAH71649.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 8.4
BC010350-1|AAH10350.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 8.4
BC009566-1|AAH09566.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 8.4
AL049589-2|CAI42952.1| 251|Homo sapiens TAF9B RNA polymerase II... 29 8.4
AF220509-1|AAG09711.1| 251|Homo sapiens transcription associate... 29 8.4
>BC029430-1|AAH29430.1| 138|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 138
Score = 70.9 bits (166), Expect = 2e-12
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FARHA+
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAK 73
Query: 66 RCKIQGEDVKLLVRRNKSLRSQLESRSPTAA---LKRKSSLAEDIFEDASSNFDEPA 119
R I EDVKLL RR+ SL + +S A L+RK+ + ED S N +PA
Sbjct: 74 RTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKK-SEDGSKNSRQPA 129
>AL354956-5|CAI19199.1| 138|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 138
Score = 70.9 bits (166), Expect = 2e-12
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FARHA+
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAK 73
Query: 66 RCKIQGEDVKLLVRRNKSLRSQLESRSPTAA---LKRKSSLAEDIFEDASSNFDEPA 119
R I EDVKLL RR+ SL + +S A L+RK+ + ED S N +PA
Sbjct: 74 RTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKK-SEDGSKNSRQPA 129
>AL139424-5|CAI95755.1| 138|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 138
Score = 70.9 bits (166), Expect = 2e-12
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FARHA+
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAK 73
Query: 66 RCKIQGEDVKLLVRRNKSLRSQLESRSPTAA---LKRKSSLAEDIFEDASSNFDEPA 119
R I EDVKLL RR+ SL + +S A L+RK+ + ED S N +PA
Sbjct: 74 RTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKK-SEDGSKNSRQPA 129
>AL354956-7|CAI19201.1| 164|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 164
Score = 64.9 bits (151), Expect = 1e-10
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FARHA+
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAK 73
Query: 66 RCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSL 103
R I EDVKLL RR+ SL Q AA RKSSL
Sbjct: 74 RTTINTEDVKLLARRSNSLHMQ------EAAGIRKSSL 105
>AL139424-7|CAI95757.1| 164|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 164
Score = 64.9 bits (151), Expect = 1e-10
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FARHA+
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAK 73
Query: 66 RCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSL 103
R I EDVKLL RR+ SL Q AA RKSSL
Sbjct: 74 RTTINTEDVKLLARRSNSLHMQ------EAAGIRKSSL 105
>AF521016-1|AAM70482.1| 164|Homo sapiens unknown protein.
Length = 164
Score = 64.9 bits (151), Expect = 1e-10
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FARHA+
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAK 73
Query: 66 RCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKRKSSL 103
R I EDVKLL RR+ SL Q AA RKSSL
Sbjct: 74 RTTINTEDVKLLARRSNSLHMQ------EAAGIRKSSL 105
>BC015202-1|AAH15202.2| 561|Homo sapiens CENPT protein protein.
Length = 561
Score = 38.3 bits (85), Expect = 0.010
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 32 LEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQL 88
+ + + A++++ + + K DLEVFA HA R ++ ED++LL+RR + Q+
Sbjct: 473 MPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQV 529
>BC007864-1|AAH07864.2| 160|Homo sapiens CENPT protein protein.
Length = 160
Score = 38.3 bits (85), Expect = 0.010
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 32 LEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQL 88
+ + + A++++ + + K DLEVFA HA R ++ ED++LL+RR + Q+
Sbjct: 72 MPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQV 128
>BC007642-1|AAH07642.1| 558|Homo sapiens CENPT protein protein.
Length = 558
Score = 38.3 bits (85), Expect = 0.010
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 32 LEITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQL 88
+ + + A++++ + + K DLEVFA HA R ++ ED++LL+RR + Q+
Sbjct: 470 MPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQV 526
>AL354956-6|CAI19200.1| 77|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 77
Score = 35.5 bits (78), Expect = 0.073
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FA R
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFASICR 73
Query: 66 R 66
+
Sbjct: 74 K 74
>AL139424-6|CAI95756.1| 77|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 77
Score = 35.5 bits (78), Expect = 0.073
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FA R
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFASICR 73
Query: 66 R 66
+
Sbjct: 74 K 74
>AF516753-1|AAM61954.1| 77|Homo sapiens unknown protein.
Length = 77
Score = 35.5 bits (78), Expect = 0.073
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 8 SASQRLRAALKRDVTAICLESTVGLEI--TKPAMDLILELIYKKLSVYASDLEVFARHAR 65
S QRL+AA+ V +C E + E+ +K + I EL +++ +A DLE+FA R
Sbjct: 14 SYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFASICR 73
Query: 66 R 66
+
Sbjct: 74 K 74
>AY333928-1|AAR13293.1| 408|Homo sapiens USP16 protein.
Length = 408
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 84 LRSQLESRSPTAALKRKSS--LAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVEN 141
+R Q +P A K + L E S N E K+ M KE PPM +TV+
Sbjct: 138 VRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNSPCQITVKG 197
Query: 142 VVDL 145
+ +L
Sbjct: 198 LSNL 201
>AL163249-3|CAB90432.1| 823|Homo sapiens human ubiquitin processing
protease, EC 3.1.2.15 protein.
Length = 823
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 84 LRSQLESRSPTAALKRKSS--LAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVEN 141
+R Q +P A K + L E S N E K+ M KE PPM +TV+
Sbjct: 138 VRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNSPCQITVKG 197
Query: 142 VVDL 145
+ +L
Sbjct: 198 LSNL 201
>AK222884-1|BAD96604.1| 823|Homo sapiens ubiquitin specific
protease 16 isoform a variant protein.
Length = 823
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 84 LRSQLESRSPTAALKRKSS--LAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVEN 141
+R Q +P A K + L E S N E K+ M KE PPM +TV+
Sbjct: 138 VRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNSPCQITVKG 197
Query: 142 VVDL 145
+ +L
Sbjct: 198 LSNL 201
>AK222681-1|BAD96401.1| 823|Homo sapiens ubiquitin specific
protease 16 isoform a variant protein.
Length = 823
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 84 LRSQLESRSPTAALKRKSS--LAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVEN 141
+R Q +P A K + L E S N E K+ M KE PPM +TV+
Sbjct: 138 VRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNSPCQITVKG 197
Query: 142 VVDL 145
+ +L
Sbjct: 198 LSNL 201
>AF126736-1|AAD20949.1| 823|Homo sapiens ubiquitin processing
protease protein.
Length = 823
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 84 LRSQLESRSPTAALKRKSS--LAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAIDMTVEN 141
+R Q +P A K + L E S N E K+ M KE PPM +TV+
Sbjct: 138 VRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNSPCQITVKG 197
Query: 142 VVDL 145
+ +L
Sbjct: 198 LSNL 201
>BC095479-1|AAH95479.1| 563|Homo sapiens coiled-coil domain
containing 38 protein.
Length = 563
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 33 EITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRS 92
+ +K ++IL I KLS+++S+ E + R + ED R ++ S+ +R+
Sbjct: 242 QASKSKANIILPKILAKLSLHSSNKEGILEESGRTAVLSEDAS-QGRDSQGKPSRSLTRT 300
Query: 93 PTAALKRKSSLAEDIFEDASSNF 115
P K+KS+LAE + S F
Sbjct: 301 PE---KKKSNLAESFGSEDSLEF 320
>BC030712-1|AAH30712.1| 495|Homo sapiens CCDC38 protein protein.
Length = 495
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 33 EITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRS 92
+ +K ++IL I KLS+++S+ E + R + ED R ++ S+ +R+
Sbjct: 242 QASKSKANIILPKILAKLSLHSSNKEGILEESGRTAVLSEDAS-QGRDSQGKPSRSLTRT 300
Query: 93 PTAALKRKSSLAEDIFEDASSNF 115
P K+KS+LAE + S F
Sbjct: 301 PE---KKKSNLAESFGSEDSLEF 320
>AK097408-1|BAC05038.1| 563|Homo sapiens protein ( Homo sapiens
cDNA FLJ40089 fis, clone TESTI2003181. ).
Length = 563
Score = 31.1 bits (67), Expect = 1.6
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 33 EITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRS 92
+ +K ++IL I KLS+++S+ E + R + ED R ++ S+ +R+
Sbjct: 242 QASKSKANIILPKILAKLSLHSSNKEGILEESGRTAVLSEDAS-QGRDSQGKPSRSLTRT 300
Query: 93 PTAALKRKSSLAEDIFEDASSNF 115
P K+KS+LAE + S F
Sbjct: 301 PE---KKKSNLAESFGSEDSLEF 320
>BC030777-1|AAH30777.1| 822|Homo sapiens ubiquitin specific
peptidase 16 protein.
Length = 822
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 109 EDASSNFDEPAMKDKMRKEEPPMEDAIDMTVENVVDL 145
E S N E K+ M KE PPM +TV+ + +L
Sbjct: 164 EKESKNEQEREKKENMAKENPPMNSPCQITVKGLSNL 200
>U30504-1|AAA84389.1| 264|Homo sapiens TAFII31 protein.
Length = 264
Score = 29.5 bits (63), Expect = 4.8
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76
>U25112-1|AAA91318.1| 264|Homo sapiens TBP-associated factor
TAFII31 protein.
Length = 264
Score = 29.5 bits (63), Expect = 4.8
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76
>U21858-1|AAC50153.1| 264|Homo sapiens TAFII32 precursor protein.
Length = 264
Score = 29.5 bits (63), Expect = 4.8
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76
>BT019652-1|AAV38458.1| 264|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 264
Score = 29.5 bits (63), Expect = 4.8
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76
>BC033320-1|AAH33320.1| 264|Homo sapiens TAF9 protein protein.
Length = 264
Score = 29.5 bits (63), Expect = 4.8
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76
>BC003400-1|AAH03400.1| 264|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 264
Score = 29.5 bits (63), Expect = 4.8
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76
>AY189986-1|AAN84793.1| 264|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 264
Score = 29.5 bits (63), Expect = 4.8
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76
>BC045626-1|AAH45626.3| 471|Homo sapiens PBX/knotted 1 homeobox 2
protein.
Length = 471
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 88 LESRSPTAALKRKSSLAEDIFEDASSNFDEPAMKDKMRKEEPPMEDAID-MTVENVVDL 145
L S S T A+++ A D D + DE D+M +EE +E+ +D + NV DL
Sbjct: 408 LSSDSATMAMQQAMMAAHDDSLDGTEEEDE----DEMEEEEEELEEEVDELQTTNVSDL 462
>AL160060-2|CAH71301.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 40 DLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKR 99
D+I + KL+ ++ + R RR + +K+L R L+ E R A ++
Sbjct: 905 DVIFDPYAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMES 964
Query: 100 KSSLAEDIFEDASSNFDEPAMKDKMRKE 127
K E + ++SNF E + KE
Sbjct: 965 KRMKVEKM--SSNSNFSEVTLAGLASKE 990
>AL160060-1|CAH71300.1| 2214|Homo sapiens supervillin protein.
Length = 2214
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 40 DLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKR 99
D+I + KL+ ++ + R RR + +K+L R L+ E R A ++
Sbjct: 1331 DVIFDPYAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMES 1390
Query: 100 KSSLAEDIFEDASSNFDEPAMKDKMRKE 127
K E + ++SNF E + KE
Sbjct: 1391 KRMKVEKM--SSNSNFSEVTLAGLASKE 1416
>AL158167-3|CAI15237.1| 2214|Homo sapiens supervillin protein.
Length = 2214
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 40 DLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKR 99
D+I + KL+ ++ + R RR + +K+L R L+ E R A ++
Sbjct: 1331 DVIFDPYAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMES 1390
Query: 100 KSSLAEDIFEDASSNFDEPAMKDKMRKE 127
K E + ++SNF E + KE
Sbjct: 1391 KRMKVEKM--SSNSNFSEVTLAGLASKE 1416
>AL158167-2|CAI15236.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 40 DLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKR 99
D+I + KL+ ++ + R RR + +K+L R L+ E R A ++
Sbjct: 905 DVIFDPYAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMES 964
Query: 100 KSSLAEDIFEDASSNFDEPAMKDKMRKE 127
K E + ++SNF E + KE
Sbjct: 965 KRMKVEKM--SSNSNFSEVTLAGLASKE 990
>AF109135-1|AAD14682.1| 2214|Homo sapiens archvillin protein.
Length = 2214
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 40 DLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKR 99
D+I + KL+ ++ + R RR + +K+L R L+ E R A ++
Sbjct: 1331 DVIFDPYAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMES 1390
Query: 100 KSSLAEDIFEDASSNFDEPAMKDKMRKE 127
K E + ++SNF E + KE
Sbjct: 1391 KRMKVEKM--SSNSNFSEVTLAGLASKE 1416
>AF051851-1|AAC64696.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 40 DLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKR 99
D+I + KL+ ++ + R RR + +K+L R L+ E R A ++
Sbjct: 905 DVIFDPYAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMES 964
Query: 100 KSSLAEDIFEDASSNFDEPAMKDKMRKE 127
K E + ++SNF E + KE
Sbjct: 965 KRMKVEKM--SSNSNFSEVTLAGLASKE 990
>AF051850-1|AAC64695.1| 1788|Homo sapiens supervillin protein.
Length = 1788
Score = 29.1 bits (62), Expect = 6.3
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 40 DLILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVRRNKSLRSQLESRSPTAALKR 99
D+I + KL+ ++ + R RR + +K+L R L+ E R A ++
Sbjct: 905 DVIFDPYAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMES 964
Query: 100 KSSLAEDIFEDASSNFDEPAMKDKMRKE 127
K E + ++SNF E + KE
Sbjct: 965 KRMKVEKM--SSNSNFSEVTLAGLASKE 990
>Z70281-1|CAI42018.1| 954|Homo sapiens dystrophin related protein 2
protein.
Length = 954
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 26 LESTVGLE--ITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQ-GEDVKLLVRRNK 82
L +VG + PAM+L I KK + LE F+ H+ + ++ E + L ++++
Sbjct: 61 LNGSVGASGPLEPPAMNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDE 120
Query: 83 SLRSQLESRSPTAALKRKSSLAEDIFEDASS 113
L +QL + A ++++ E+ S
Sbjct: 121 ELSAQLPLQGDVALVQQEKETHAAFMEEVKS 151
>Z68331-3|CAI42016.1| 954|Homo sapiens dystrophin related protein 2
protein.
Length = 954
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 26 LESTVGLE--ITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQ-GEDVKLLVRRNK 82
L +VG + PAM+L I KK + LE F+ H+ + ++ E + L ++++
Sbjct: 61 LNGSVGASGPLEPPAMNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDE 120
Query: 83 SLRSQLESRSPTAALKRKSSLAEDIFEDASS 113
L +QL + A ++++ E+ S
Sbjct: 121 ELSAQLPLQGDVALVQQEKETHAAFMEEVKS 151
>U43519-1|AAC50538.1| 954|Homo sapiens dystrophin-related protein 2
protein.
Length = 954
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 26 LESTVGLE--ITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQ-GEDVKLLVRRNK 82
L +VG + PAM+L I KK + LE F+ H+ + ++ E + L ++++
Sbjct: 61 LNGSVGASGPLEPPAMNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDE 120
Query: 83 SLRSQLESRSPTAALKRKSSLAEDIFEDASS 113
L +QL + A ++++ E+ S
Sbjct: 121 ELSAQLPLQGDVALVQQEKETHAAFMEEVKS 151
>BC111695-1|AAI11696.2| 954|Homo sapiens dystrophin related protein
2 protein.
Length = 954
Score = 28.7 bits (61), Expect = 8.4
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 26 LESTVGLE--ITKPAMDLILELIYKKLSVYASDLEVFARHARRCKIQ-GEDVKLLVRRNK 82
L +VG + PAM+L I KK + LE F+ H+ + ++ E + L ++++
Sbjct: 61 LNGSVGASGPLEPPAMNLCWNEIKKKSHNLRARLEAFSDHSGKLQLPLQEIIDWLSQKDE 120
Query: 83 SLRSQLESRSPTAALKRKSSLAEDIFEDASS 113
L +QL + A ++++ E+ S
Sbjct: 121 ELSAQLPLQGDVALVQQEKETHAAFMEEVKS 151
>BC071649-1|AAH71649.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 28.7 bits (61), Expect = 8.4
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQ 76
>BC010350-1|AAH10350.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 28.7 bits (61), Expect = 8.4
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQ 76
>BC009566-1|AAH09566.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 28.7 bits (61), Expect = 8.4
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQ 76
>AL049589-2|CAI42952.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding proteinctase M2 polypeptide (RRM2)
protein.
Length = 251
Score = 28.7 bits (61), Expect = 8.4
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQ 76
>AF220509-1|AAG09711.1| 251|Homo sapiens transcription associated
factor TAFII31L protein.
Length = 251
Score = 28.7 bits (61), Expect = 8.4
Identities = 8/38 (21%), Positives = 24/38 (63%)
Query: 42 ILELIYKKLSVYASDLEVFARHARRCKIQGEDVKLLVR 79
+LE ++ ++ D ++++ HA++ + +DV+L ++
Sbjct: 39 MLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQ 76
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.129 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,264,829
Number of Sequences: 224733
Number of extensions: 598377
Number of successful extensions: 2272
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2245
Number of HSP's gapped (non-prelim): 45
length of query: 148
length of database: 73,234,838
effective HSP length: 83
effective length of query: 65
effective length of database: 54,581,999
effective search space: 3547829935
effective search space used: 3547829935
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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