GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005247-TA|BGIBMGA005247-PA|undefined
         (71 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125169-1|AAI25170.1|  594|Homo sapiens C17orf38 protein protein.     28   4.1  
AY753192-1|AAV30085.1|  754|Homo sapiens p87 phosphoinositide 3-...    28   4.1  

>BC125169-1|AAI25170.1|  594|Homo sapiens C17orf38 protein protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 25  GKMMPGACRLHAFNIRLATGDDIATLSRRAAVAAHHIAK 63
           G+M+PG  RLH   + L  GDD   +  R A A H + K
Sbjct: 285 GEMLPGVSRLHTARV-LVLGDD--RMLGRLAQAYHRLRK 320


>AY753192-1|AAV30085.1|  754|Homo sapiens p87 phosphoinositide
           3-kinase gamma adapter protein protein.
          Length = 754

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 25  GKMMPGACRLHAFNIRLATGDDIATLSRRAAVAAHHIAK 63
           G+M+PG  RLH   + L  GDD   +  R A A H + K
Sbjct: 404 GEMLPGVSRLHTARV-LVLGDD--RMLGRLAQAYHRLRK 439


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.328    0.138    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,675,333
Number of Sequences: 224733
Number of extensions: 309904
Number of successful extensions: 425
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 425
Number of HSP's gapped (non-prelim): 2
length of query: 71
length of database: 73,234,838
effective HSP length: 50
effective length of query: 21
effective length of database: 61,998,188
effective search space: 1301961948
effective search space used: 1301961948
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 57 (27.1 bits)