Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005245-TA|BGIBMGA005245-PA|IPR000595|Cyclic
nucleotide-binding
(149 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 75 4e-16
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 75 4e-16
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 48 4e-08
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 1.7
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 7.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 7.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 7.1
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 21 7.1
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 7.1
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 20 9.3
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 74.5 bits (175), Expect = 4e-16
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 5 RQLVREVEFLKQLPRPLLVQIGFKLHVVIFIAGDIIFKINSVGDCVYFIDKGTVAIYSES 64
R LV V F + + KL +F GDII K ++G +YFI +G V I +
Sbjct: 448 RSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMAN 507
Query: 65 GKEVCHLEDGDFFGAISLILRRFRLTTAVAVTNCELFRLSKEDFYSTMACYPTV---YES 121
G+ L DG +FG I L+ R+ + A T C LF LS + F + + YP + ES
Sbjct: 508 GEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMES 567
Query: 122 IKKRAINRYEETCVLDEHHKSEM 144
+ +N+ + L H + ++
Sbjct: 568 VAAERLNKIGKNPNLVAHREEDL 590
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 74.5 bits (175), Expect = 4e-16
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 5 RQLVREVEFLKQLPRPLLVQIGFKLHVVIFIAGDIIFKINSVGDCVYFIDKGTVAIYSES 64
R LV V F + + KL +F GDII K ++G +YFI +G V I +
Sbjct: 416 RSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMAN 475
Query: 65 GKEVCHLEDGDFFGAISLILRRFRLTTAVAVTNCELFRLSKEDFYSTMACYPTV---YES 121
G+ L DG +FG I L+ R+ + A T C LF LS + F + + YP + ES
Sbjct: 476 GEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMES 535
Query: 122 IKKRAINRYEETCVLDEHHKSEM 144
+ +N+ + L H + ++
Sbjct: 536 VAAERLNKIGKNPNLVAHREEDL 558
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 48.0 bits (109), Expect = 4e-08
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 29 LHVVI-FIAGDIIFKINSVGDCVYFIDKGTVAIYSESGKEVCHLEDGDFFGAISLILRRF 87
LHV F AG I + VG VY +++G V + S GK + L G G ++++
Sbjct: 117 LHVSCSFSAGSTIIREGDVGSIVYVMEEGKVEV-SRDGKYLSTLAPGKVLGELAILYNCK 175
Query: 88 RLTTAVAVTNCELFRLSKEDFYSTM 112
R T A T+C+L+ + ++ F + M
Sbjct: 176 RTATITAATDCQLWAIDRQCFQTIM 200
Score = 36.7 bits (81), Expect = 1e-04
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 8 VREVEFLKQLPRPLLVQIGFKLHVVIFIAGDIIFKINSVGDCVYFIDKGTVAIY-----S 62
++ V K LP L++I L + GD I + + GD + I +G V + +
Sbjct: 215 LKSVPIFKNLPEETLIKISDVLEETFYNNGDYIIRQGARGDTFFIISRGQVRVTIKQPDT 274
Query: 63 ESGKEVCHLEDGDFFGAISL 82
K + L GDFFG +L
Sbjct: 275 PEEKYIRTLSKGDFFGEKAL 294
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 22.6 bits (46), Expect = 1.7
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 92 AVAVTNCELFRLSKEDFYSTMACYPTVYESIKKRAINRYEETCVL 136
++ ++N FRLSK T+ T+ +K+ + + C+L
Sbjct: 3 SMRLSNVATFRLSKVMLDHTINSKKTIMRILKEVCVLQANRACIL 47
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 RQLVREVEFLKQLPRPLLVQIG 26
+QL + +++Q+P P+ V G
Sbjct: 100 KQLCYNINYIEQIPVPVPVYYG 121
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 RQLVREVEFLKQLPRPLLVQIG 26
+QL + +++Q+P P+ V G
Sbjct: 100 KQLCYNINYIEQIPVPVPVYYG 121
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 RQLVREVEFLKQLPRPLLVQIG 26
+QL + +++Q+P P+ V G
Sbjct: 100 KQLCYNINYIEQIPVPVPVYYG 121
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 RQLVREVEFLKQLPRPLLVQIG 26
+QL + +++Q+P P+ V G
Sbjct: 100 KQLCYNINYIEQIPVPVPVYYG 121
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 RQLVREVEFLKQLPRPLLVQIG 26
+QL + +++Q+P P+ V G
Sbjct: 100 KQLCYNINYIEQIPVPVPVYYG 121
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.6 bits (41), Expect = 7.1
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 87 FRLTTAVAVTNCELFRLSKEDFYSTMACYPTVYESIKKRAINRY 130
FRL A TN E++ L + + YP ++ + ++ Y
Sbjct: 1079 FRLNVETAKTNEEMWELIDTEKLTDRLPYPWTMDNERYVKVDMY 1122
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 20.6 bits (41), Expect = 7.1
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 98 CELFRLSKEDFYSTMACYPTVYESIKKRAINRYEETCVLDE 138
CE ++ S D T P + ++ N E C L++
Sbjct: 67 CETYKNSIYDVSMTFGPVPKFEGEMAEKISNELNEMCPLEK 107
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 20.6 bits (41), Expect = 7.1
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 91 TAVAVTNCELFRLSKEDFYSTMACYPTVYESIKKRAI 127
T + N LF + + M +P+VY ++RA+
Sbjct: 172 TVFDLINIHLFHDASN--FIAMETFPSVYSKTRRRAL 206
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 20.2 bits (40), Expect = 9.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 117 TVYESIKKRAINRYEETCVLDEHHKSEMRMNEN 149
+V ES+ K I + +LD + + MNE+
Sbjct: 343 SVTESVLKSKIGQVFLITILDSKVSARIEMNED 375
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.326 0.141 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,230
Number of Sequences: 429
Number of extensions: 1568
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 149
length of database: 140,377
effective HSP length: 53
effective length of query: 96
effective length of database: 117,640
effective search space: 11293440
effective search space used: 11293440
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 40 (20.2 bits)
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