Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005244-TA|BGIBMGA005244-PA|undefined
(281 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr 2||... 31 0.14
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.24
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 0.99
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 28 1.7
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 27 3.0
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 27 3.0
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 27 4.0
SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subuni... 27 4.0
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 27 4.0
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 5.3
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 7.0
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 26 7.0
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 26 7.0
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 9.2
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 25 9.2
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 9.2
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 9.2
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 25 9.2
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 9.2
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 25 9.2
>SPBC8D2.14c |sed5||SNARE Sed5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.14
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 129 KLNKDGERRQSLAEFANKKTLRRESSKFSLQL-FQIAESLVGNGEEKKTRRQNRPYTRGE 187
++N+ GE+ Q L++ A +KTL + +L FQI +SL + + +Q R +
Sbjct: 53 QINQTGEKLQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVKGNRNK 112
Query: 188 STNSYLSEKKTHTDVSASASIGETSLVEPRLVK-RKSVAKLIGGRPVPMVRRSSFPALPL 246
+ +++ + VS S+ TS+ +++ R K R V SS A PL
Sbjct: 113 P--AQMNQHSENVVVSLQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMNANPL 170
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.24
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 18/207 (8%)
Query: 32 SIEKPDEIINAASIDLRKNVTQLKREKKKGVPLQFKNACSILQIFTEKPEIEYKNKKDKT 91
S+E DEI LR + K+ +K + A S L EK + E +N+ ++
Sbjct: 1563 SLENADEIAR-----LRSQLESTKQYYEKEKETEILAARSELVAEKEKTKEELENQLNEK 1617
Query: 92 YDENSXXXXXXXXXXXXXXXXXXVDVIKVKEEER-KKQKLNKDGERRQSLAE--FANKKT 148
D+IK + EE+ K+ N D + ++ +AE F +K
Sbjct: 1618 SQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKLKENSANFDVKLKKVVAETEFRSKAK 1677
Query: 149 L---RRESSKFSLQLFQIAESLVGNGEEKKTRRQNRPYTRGESTNSYLSEKKTHTDVSAS 205
+ +++ ++ Q+ E++ E ++ + P EST+S K + +AS
Sbjct: 1678 ISVYEKKTRDLQNKITQLEETI-----ENLNKQLSNPEKTDESTSSVTETKPVTSKPTAS 1732
Query: 206 -ASIGETSLVEPRLVKRKSVAKLIGGR 231
A +G+ + E KR+ K + R
Sbjct: 1733 KADVGQNA-TEASSAKREPSGKSLSAR 1758
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 28.7 bits (61), Expect = 0.99
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 124 ERKKQKLNKDGERRQSLAEFANKKTLRRESSKFSLQLFQIAESLVGNGEEKKTRRQNRPY 183
E++K DG R+ FA TL R S+ FQ+A+S + T NR +
Sbjct: 389 EQEKGAHRLDGRGRKRGKSFAVTPTLHRNERSMSVLPFQLAKSFTSALPRRLT--FNRTH 446
Query: 184 TRGESTN-SYLSEKKT 198
T+ + + YLS T
Sbjct: 447 TKASTMSLPYLSYNAT 462
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 31 QSIEKPDEIINAASIDLRKNVTQLKREKKKGVPL---QFKNACSILQIFTEKPEIEYKNK 87
Q+ EK +++ ++ R+ + K E++K + + Q N+CS L++ T + Y
Sbjct: 1077 QAQEKLEKL--KVEVERRRRLLSEKEERRKELAIKIEQVTNSCSDLELRTNAEQDFYAKN 1134
Query: 88 KDKTYDE 94
+D +DE
Sbjct: 1135 QDFEFDE 1141
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 150 RRESSKFSLQLFQIAESLVGNGEEKKTRRQNRPYTRGESTN 190
R ES + + QLF E G+G++ + ++ N Y + ++ N
Sbjct: 167 RSESVELAEQLFDDTEFRYGSGQKMRVQKANIDYKKEKTVN 207
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 188 STNSYLSEKKTHTDVSASASIGETSL 213
S+N+Y S + T+TD S+SI +TSL
Sbjct: 476 SSNAYESYRNTYTDDMDSSSIYQTSL 501
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 133 DGERRQSLAEFANKKTLRRESSKFSLQLFQIAESLVGNGEEKKTRRQNRPYTRGESTNSY 192
D ER S + A+ K +RRES F L + G+ + + T +S++ +
Sbjct: 507 DAERFHSRSVDASPKAVRRESRSFFPSLTRKRSKFFGSSQSNSPKDSPLRDTH-KSSDEH 565
Query: 193 LSEKKTHT 200
K +HT
Sbjct: 566 SESKHSHT 573
>SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subunit
Pmh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 318
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 115 VDVIKVKEEERKKQKLNKDGERRQSLAEFANKKTLRRESSKFSLQLFQIAESLVGNGEEK 174
+DV + +E+ ++ +K N+D S A + L + Q + E+ + +++
Sbjct: 123 IDVEETEEKVKQYEKQNRDSIAANSARAAAEARILAQNEILLKRQKQEAREAAIREHQKE 182
Query: 175 KTRRQ 179
K RR+
Sbjct: 183 KERRE 187
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 118 IKVKEEERKKQKLNKDGER-RQSLAEFANK 146
++ + E+R+K + KDGE+ R +LA F +K
Sbjct: 228 LRAQLEDREKSRDKKDGEKQRDNLASFEDK 257
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 26 MKNDVQSIEKPDEIINAASIDLRKNVTQLKREKKKGVPLQFKNACSILQIFTEKPEIEYK 85
++N Q ++ + I++ S + + L +K+GV L+ + +LQ E E K
Sbjct: 871 VENGSQLLDSKSKAIHSNSRSMYDHCLALAESQKQGVNLEVQTLDRLLQKVKEHSEDNTK 930
Query: 86 NKKDKTYD 93
K + D
Sbjct: 931 EKHQQLLD 938
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 49 KNVTQLKREKKKGVPLQFKNACSILQIFTEKPE----IEYKNKKDKTYDE 94
+ +++ + K +P+ FK+ S + FT+K E + K K+++ ++E
Sbjct: 77 ERLSEFSQRVNKAIPVSFKSGPSKIDEFTDKKEKKKIAKRKEKRERDWNE 126
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 118 IKVKEEERKKQKLNKDGERRQSLAEFANKKTLRRESSKFSLQLFQIAESLVGNGEEKKTR 177
+K +++ +KK++ + + E S +E + + ESS + S + EE +
Sbjct: 71 VKKQKKSKKKEESSSESESESSSSE-SESSSSESESSSSESESSSSESSSSESEEEVIVK 129
Query: 178 RQNRPYTRGESTNSYLSEKK 197
+ + + ES++S SE++
Sbjct: 130 TEEKKESSSESSSSSESEEE 149
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 7.0
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 118 IKVKEEERKKQKLNKDGERRQSLAEFANKKTLRRE-SSKFSLQLFQIAESLVGNGEEKKT 176
+K KEEE ++QK E++Q + + +K +E + ++ L + + N E K+
Sbjct: 178 LKEKEEEARRQK-----EQQQGVVQVRQQKEYLKELERQKTVPLARYEDDPEYNKELKER 232
Query: 177 RRQNRPYTRGESTNSYLSEKKTH 199
R N P TN +S K T+
Sbjct: 233 SRWNDP-AASFLTNKPVSSKATY 254
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 123 EERKKQKLNKDGERRQSLAEFANKKTLRRESSKFSLQLFQIAESLVGNGEEKK 175
++RKK K NK+GE ++ N ++ + S + S NG +KK
Sbjct: 133 KDRKKSK-NKNGEEPETSTSVENAESAKGSSDENEANTATAPSSNEANGVDKK 184
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 214 VEPRLVKRKSVAKLIG-GRPVPMVRRSSF-PALPLNPEIQALM 254
++P+ +K K ++ R +P RSS P+ PL+PE++ L+
Sbjct: 507 IDPKTIKVKVKDFVMSMKRMIPSSERSSISPSKPLSPELKPLL 549
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.4 bits (53), Expect = 9.2
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 118 IKVKEEERKKQKLNKDGERRQSLAEFANKKTLRRESSKFSLQLFQI-AESLVGNGEEKKT 176
+K +EE RKK+ + K+ + ++ + +K +E+ + L+ QI A+ EK+
Sbjct: 130 LKDEEERRKKELMEKEKKEKERIRLIEEQK--HKENEQRRLKQEQIDAKRKEEEAREKRM 187
Query: 177 RRQNRPYTRGESTNSYLSEKKTHTDVSASAS 207
+ + +S ++ K T+V A S
Sbjct: 188 KETFKDDPEEDSNMAWSIIHKIKTEVVAPIS 218
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 122 EEERKKQKLNKDGERRQSLAEFANKKTLRRESS 154
EE RK+ NK G + A K TLR++ S
Sbjct: 274 EENRKQYLQNKSGSPVEETAILNRKPTLRKKKS 306
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 115 VDVIKVKEEERKKQKLNKDGERRQSLAEFANKKTLR 150
V +I EE+ + LN+ GE R A AN+++ R
Sbjct: 658 VSIIDFNEEDTVYKMLNRAGENRFIAATKANERSSR 693
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 115 VDVIKVKEEERKKQK-LNKDGERRQSLAEFANKKTL 149
V++ K EEE KK++ KDG++ ++ + K+TL
Sbjct: 672 VEISKPSEEEDKKEEVEKKDGDKERNEEKKEEKETL 707
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 25.4 bits (53), Expect = 9.2
Identities = 20/92 (21%), Positives = 37/92 (40%)
Query: 116 DVIKVKEEERKKQKLNKDGERRQSLAEFANKKTLRRESSKFSLQLFQIAESLVGNGEEKK 175
+ K ++++ +K+K + + + + S NKK E K +L+ E L E
Sbjct: 12 EAAKSRKQDEEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAERERLEKEEMESL 71
Query: 176 TRRQNRPYTRGESTNSYLSEKKTHTDVSASAS 207
+ + + NS L T +AS S
Sbjct: 72 PSKGGKGSKKAAKKNSSLDAFLNETPQTASYS 103
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 152 ESSKFSLQLFQIAESLVGNGEEKKTRRQNRPYTRGESTNSYLSEKKTHT 200
+SSKF Q F+ + ++ +G E+ ++ P + +NS ++ + HT
Sbjct: 52 DSSKFWKQFFEASANVSLSGVEEPVPVESNPSDQDVMSNSTEADLQLHT 100
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.130 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,156,625
Number of Sequences: 5004
Number of extensions: 45277
Number of successful extensions: 163
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 150
Number of HSP's gapped (non-prelim): 25
length of query: 281
length of database: 2,362,478
effective HSP length: 72
effective length of query: 209
effective length of database: 2,002,190
effective search space: 418457710
effective search space used: 418457710
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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