Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005239-TA|BGIBMGA005239-PA|IPR013772|Alpha-amylase,
IPR006047|Glycosyl hydrolase, family 13, catalytic region,
IPR006589|Glycosyl hydrolase, family 13, subfamily, catalytic region
(379 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0818 + 20014685-20014687,20014792-20014831,20014988-200150... 48 2e-05
08_02_0986 + 23328056-23328145,23328289-23329227,23329313-233295... 44 2e-04
02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629... 43 4e-04
02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684... 38 0.010
08_02_0987 + 23334208-23334297,23334422-23335360,23335449-23335730 38 0.018
06_03_1380 + 29747187-29747267,29747349-29747481,29747758-297477... 36 0.041
09_04_0388 + 17234485-17234583,17234710-17234893,17235252-172360... 35 0.12
09_04_0390 + 17241546-17241638,17241715-17242653,17242753-17243037 34 0.22
04_03_0484 + 16455597-16455809,16456417-16456537,16456728-164568... 33 0.29
01_06_1105 - 34559694-34559852,34560298-34560312,34560451-345605... 33 0.50
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287... 32 0.66
09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223 32 0.87
01_06_0490 + 29759801-29759880,29759881-29759980,29760468-297605... 31 2.0
08_01_0041 - 290333-290698,290854-291861 30 3.5
05_07_0182 + 28243881-28245406,28245460-28245505,28246309-282464... 29 4.7
04_01_0332 + 4378111-4378329,4378862-4378997,4379113-4379165,437... 29 4.7
03_01_0596 + 4398920-4398982,4399395-4399797,4400234-4400340,440... 29 8.1
>04_03_0818 +
20014685-20014687,20014792-20014831,20014988-20015025,
20015359-20015485,20015571-20015797,20015919-20016064,
20016166-20016284,20016711-20016799,20016881-20017003,
20017123-20017158,20017464-20017562,20017642-20017833
Length = 412
Score = 47.6 bits (108), Expect = 2e-05
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 35 HLFEWKWKDIADECERFLAPKGFGGVQVSPPSENVIIRLSDGTRPWYERYQVMSYKLITR 94
H W W ++ ++ LA GF + PP++++ +G P Q + Y L +
Sbjct: 34 HKHNW-WSNLEEKVVD-LAQSGFTSAWLPPPTQSLS---PEGYLP-----QNL-YCLDSC 82
Query: 95 SGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYTRD 154
G+ + + R+ + +R ADVVINH T GS Y Y +P + D
Sbjct: 83 YGSLHDLQALLRKMKEHNVRAMADVVINHRVGT------TQGSNGMYNRYD--GIPVSWD 134
Query: 155 HFHHPSCSINNYNDAAQVRACDLVGLKDLNHNLPYVRDKIVEYLNKL-IALGVAGFRVDA 213
SCS N++ + G+ +++H P+VR I+++L L ++G FR D
Sbjct: 135 EHAVTSCSGGKGNEST---GDNFDGVPNIDHTQPFVRKDIIDWLIWLRESIGFQDFRFDF 191
Query: 214 AK 215
K
Sbjct: 192 TK 193
>08_02_0986 +
23328056-23328145,23328289-23329227,23329313-23329570,
23330384-23330692
Length = 531
Score = 44.0 bits (99), Expect = 2e-04
Identities = 82/334 (24%), Positives = 133/334 (39%), Gaps = 46/334 (13%)
Query: 41 WKDIADECERFLAPKGFGGVQVSPPSENVIIRLSDGTRPWYERYQVMSYKLITRSGNQDE 100
W + E +A G V + PPS +V G P Y + + K G + E
Sbjct: 43 WYNFLHEKVEEIASTGATHVWLPPPSHSVS---PQGYMPG-RLYDLDASKY----GTEAE 94
Query: 101 FLNMTRRCNDVGIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYTRDHFHHPS 160
++ +D + AD+VINH +D ++S G Y + D
Sbjct: 95 LKSLIEAFHDKNVECLADIVINHRCADYKDSRGV------YCVFEGGTPDGRLDWGPDMI 148
Query: 161 CSINN-YNDAAQVR--ACDLVGLKDLNHNLPYVRDKIVEYLNKLIA-LGVAGFRVDAAKH 216
CS + Y++ R D++H P V+ ++ ++LN L LG G+R+D AK
Sbjct: 149 CSDDTQYSNGRGHRDTGAGFGAAPDIDHLNPRVQRELTDWLNWLRTDLGFDGWRLDFAKG 208
Query: 217 MWPHDLKEMYNRLNNLNVDFGFLPNTKPYIYQEVIYRGNEPIQHTEYTPFGDVTEFRVGY 276
+ L +Y ++N N F I+ +IY G+ + ++ + G
Sbjct: 209 -YSAPLARIY--VDNTNPTF-----VVGEIWSSLIYNGDGKPSTNQDADRQELVNWVEGV 260
Query: 277 ELKPV----FEGKNPLKWLKSWGENWNL------SPS------DRVVVFIDNHDTQRSNE 320
KP F K L+ GE W L +P D+ V F+DNHDT +
Sbjct: 261 G-KPATAFDFTTKGILQAAVQ-GELWRLHDGNGKAPGLMGWMPDQAVTFVDNHDTGSTQS 318
Query: 321 VLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFD 354
+ + + K + A+ L HP G P + + FD
Sbjct: 319 LWPFPSDKVMQ-GYAYILTHP-GIPCIFYDHVFD 350
>02_05_0853 +
32261705-32261794,32261895-32262027,32262117-32262928,
32263020-32263271
Length = 428
Score = 43.2 bits (97), Expect = 4e-04
Identities = 73/324 (22%), Positives = 131/324 (40%), Gaps = 46/324 (14%)
Query: 52 LAPKGFGGVQVSPPSENVIIRLSDGTRPWYERYQVMSYKLITRSGNQDEFLNMTRRCNDV 111
+A G V + PPS++V G P Y + + K GN+ + ++ +
Sbjct: 54 IAAAGITHVWLPPPSQSVA---EQGYMPG-RLYDLDASKY----GNEAQLKSLIEAFHGK 105
Query: 112 GIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYTRDHFHHPSCSINNYNDAA- 170
G+++ AD+VINH T+++++ G Y + D H C + Y D
Sbjct: 106 GVQVIADIVINHRTAEHKDGRGI------YCLFEGGTPDSRLDWGPHMICRGDPYGDGTG 159
Query: 171 -QVRACDLVGLKDLNHNLPYVRDKIVEYLNKL-IALGVAGFRVDAAKHMWPHDLKEMYNR 228
D D++H V+ +++ +L+ L + +G +R+D AK + D+ ++Y
Sbjct: 160 NPDTGADFGAAPDIDHLNKRVQRELIGWLDWLKMDIGFDAWRLDFAKG-YSADVAKIY-- 216
Query: 229 LNNLNVDFGFLPNTKPYIYQEVIYRGNEPIQHTEYTPFGDVTEF--RVGYELKPV----F 282
++ F I+ + Y G+ + + ++ + RVG F
Sbjct: 217 IDATEPSFAVAE-----IWTSLAYGGDGKPDYDQNAHRQELVNWVDRVGGANSNATTFDF 271
Query: 283 EGKNPLKWLKSWGENWNLSPSD------------RVVVFIDNHDTQRSNEVLTYKNAKSY 330
K L + GE W L D + FIDNHDT + + + + K
Sbjct: 272 TTKGILN-VAVEGELWRLRGEDGKAPGMIGWWPAKATTFIDNHDTGSTQHMWPFPSDKVM 330
Query: 331 KAAIAFTLAHPYGEPRVMSGYFFD 354
+ A+ L HP G P + +FFD
Sbjct: 331 Q-GYAYILTHP-GNPCIFYDHFFD 352
>02_05_0854 -
32267047-32267298,32267383-32268194,32268289-32268421,
32268530-32268619
Length = 428
Score = 38.3 bits (85), Expect = 0.010
Identities = 30/137 (21%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 93 TRSGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYT 152
++ GN+ + ++ + G+++ AD+VINH T+++++ G Y +
Sbjct: 87 SKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTAEHKDGRGI------YCLFEGGTPDSR 140
Query: 153 RDHFHHPSCSINNYNDAA--QVRACDLVGLKDLNHNLPYVRDKIVEYLNKL-IALGVAGF 209
D H C + Y D D D++H V+ +++ +L+ L + +G +
Sbjct: 141 LDWGPHMICRDDPYGDGTGNPDTGADFAAAPDIDHLNKRVQRELIGWLDWLKMDIGFDAW 200
Query: 210 RVDAAKHMWPHDLKEMY 226
R+D AK + D+ ++Y
Sbjct: 201 RLDFAKG-YSADMAKIY 216
Score = 33.9 bits (74), Expect = 0.22
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 305 RVVVFIDNHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFD 354
+ F+DNHDT + + + + K + A+ L HP G P + +FFD
Sbjct: 305 KATTFVDNHDTGSTQHLWPFPSDKVMQ-GYAYILTHP-GNPCIFYDHFFD 352
>08_02_0987 + 23334208-23334297,23334422-23335360,23335449-23335730
Length = 436
Score = 37.5 bits (83), Expect = 0.018
Identities = 62/283 (21%), Positives = 122/283 (43%), Gaps = 40/283 (14%)
Query: 93 TRSGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGT-----GGSTANYKEYSYP 147
++ G E ++ + G++ ADVVINH ++ +++ G GG+ + ++ P
Sbjct: 87 SKYGTAAELKSLIAAFHGKGVQCVADVVINHRCAEKKDARGVYCVFEGGTPDDRLDWG-P 145
Query: 148 AVPYTRDHFHHPSCSINNYNDAAQVRACDLVGLKDLNHNLPYVRDKIVEYLNKLIA-LGV 206
+ + D + + D + D++H P V+ ++ ++LN L + +G
Sbjct: 146 GMICSDDTQYSDG---TGHRDTGE----GFGAAPDIDHLNPRVQRELTDWLNWLKSDVGF 198
Query: 207 AGFRVDAAKHMWPHDLKEMYNRL-----------NNLNVDFGFLPNT-KPYIYQEVIYRG 254
G+R+D AK + D+ +MY N+L+ + P + QE++
Sbjct: 199 DGWRLDFAKG-YSTDIAKMYVESCKPGFVVAEIWNSLSYNGDGKPAANQDQGRQELVNWV 257
Query: 255 NE---PIQHTEYTPFGDVTEFRVGYELKPVFEGKNPLKWLKSWGENWNLSPSDRVVVFID 311
N P ++T G + + V EL + +G + W ++ V F+D
Sbjct: 258 NAVGGPAMTFDFTTKG-LLQAGVQGELWRLRDGNGKAAGMIGW-------LPEKAVTFVD 309
Query: 312 NHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFD 354
NHDT + ++ + + K + A+ L HP G P + + FD
Sbjct: 310 NHDTGSTQKLWPFPSDKVMQ-GYAYILTHP-GVPCIFYDHMFD 350
>06_03_1380 +
29747187-29747267,29747349-29747481,29747758-29747770,
29748027-29748118,29749011-29749831,29750375-29750677
Length = 480
Score = 36.3 bits (80), Expect = 0.041
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 305 RVVVFIDNHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFD 354
+ V F+DNHDT + ++ + + K + A+ L HP G P + +FFD
Sbjct: 340 KAVTFVDNHDTGSTQQMWPFPSDKVMQ-GYAYILTHP-GNPCIFYDHFFD 387
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 93 TRSGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVG 133
+R G E ++ + GI+ ADVVINH +D ++S G
Sbjct: 119 SRYGTSMELKSLISALHGKGIQAIADVVINHRCADYKDSRG 159
>09_04_0388 +
17234485-17234583,17234710-17234893,17235252-17236057,
17236148-17236432
Length = 457
Score = 34.7 bits (76), Expect = 0.12
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 93 TRSGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGT-----GGSTANYKEYSYP 147
++ G + E ++ + GI+ AD+V+NH +D+++ G GG ++
Sbjct: 107 SKYGTKAELKSLIAAFHAKGIKCVADIVVNHRCADDKDGRGVYCIFKGGGPRGCLDWGPS 166
Query: 148 AVPYTRDHFHHPSCSINNYNDAAQVR--ACDLVGLKDLNHNLPYVRDKIVEYLNKLIA-L 204
+ C Y+D R D D++H P V+ ++ ++L L +
Sbjct: 167 MI----------CCDDTQYSDGTGHRDTGADFAAAPDIDHLNPLVQRELSDWLRWLRRDV 216
Query: 205 GVAGFRVDAAK 215
G G+R+D AK
Sbjct: 217 GFDGWRLDFAK 227
Score = 31.9 bits (69), Expect = 0.87
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 304 DRVVVFIDNHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFD 354
++ V F+DNHDT + + + + K A+ L HP G P + + FD
Sbjct: 322 EKAVTFVDNHDTGSTQRMWPFPSDKVI-LGYAYILTHP-GVPCIFYDHVFD 370
>09_04_0390 + 17241546-17241638,17241715-17242653,17242753-17243037
Length = 438
Score = 33.9 bits (74), Expect = 0.22
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 34/280 (12%)
Query: 93 TRSGNQDEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYT 152
++ G E ++ + GI+ AD+VINH +D ++S G Y +
Sbjct: 88 SKYGTGAELRSLIAAFHSKGIKCVADIVINHRCADYKDSRGI------YCIFEGGTPDSR 141
Query: 153 RDHFHHPSCSINN-YNDAAQVR--ACDLVGLKDLNHNLPYVRDKIVEYLNKLIA-LGVAG 208
D CS + Y++ R D D++H V+ ++ ++LN L + +G G
Sbjct: 142 LDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNTRVQTELSDWLNWLKSDVGFDG 201
Query: 209 FRVDAAKHMWPHDLKEMYNRLN----------NLNVDFGFLPN-TKPYIYQEVIYRGNE- 256
+R+D AK K + + N+ D P+ + QE++
Sbjct: 202 WRLDFAKGYSAAVAKTYVDNTDPSFVVAEIWSNMRYDGNGEPSWNQDGDRQELVNWAQAV 261
Query: 257 --PIQHTEYTPFGDVTEFRVGYELKPVFEGKNPLKWLKSWGENWNLSPSDRVVVFIDNHD 314
P ++T G++ + V EL + +G + W ++ V FIDNHD
Sbjct: 262 GGPASAFDFTTKGEL-QAAVQGELWRMKDGNGKAPGMIGW-------LPEKAVTFIDNHD 313
Query: 315 TQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFD 354
T + + + K + A+ L HP G P + + FD
Sbjct: 314 TGSTQNSWPFPSDKVMQ-GYAYILTHP-GVPCIFYDHVFD 351
>04_03_0484 +
16455597-16455809,16456417-16456537,16456728-16456822,
16458633-16458747,16458868-16458992,16459354-16459460,
16459548-16459626
Length = 284
Score = 33.5 bits (73), Expect = 0.29
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 119 VVINHMTSDNRESVGTGGSTANYKEYS---YPAVPYTRDHFHHPSCSI-----NNYNDAA 170
+V+ +S VG G + + Y +P+++ P+ + N+ +
Sbjct: 19 LVLEPRSSAEANLVGVNGGETDERRLESLVYDELPFSQLGLGFPTTVVAGGSENDVEEVV 78
Query: 171 QVRACDLVGLKDLNHNLPYVR--DKIVEYLNKLIALGVAGFRVDAAKHMWPHDLKEMYNR 228
Q D + + LP+ R D ++ L KL+ LG+ R+DA H +LK M +
Sbjct: 79 QAWYMDDDDNAEEDQRLPHRRQPDDLLP-LAKLLDLGLVAMRLDADNHEHDENLKIMREQ 137
Query: 229 LNNLNVDFGFLPNTKPYIYQEVIYRGNEPIQHTE 262
L++D L K Y+ +I R E HT+
Sbjct: 138 RGYLHMDIVELTPEKMPNYEVMIKRFFEEHLHTD 171
>01_06_1105 -
34559694-34559852,34560298-34560312,34560451-34560522,
34560695-34561549
Length = 366
Score = 32.7 bits (71), Expect = 0.50
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 328 KSYKAAIAFTLAHPYGEPRVMSGYFFDRTDQGPPSDGNEEILSPIINDVST 378
+ YK IA T AH +G+ V YF +R P + G IL P +D T
Sbjct: 184 EQYKQQIASTDAHHHGQQGVQGAYFPNRLVPQPLNVGPGAILEPSYSDGQT 234
>09_03_0041 +
11826788-11828002,11828101-11828563,11828668-11828798,
11829227-11829577,11829723-11829879,11829968-11830260,
11830367-11830426,11830530-11830619,11830774-11830857
Length = 947
Score = 32.3 bits (70), Expect = 0.66
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 170 AQVRACDLVGLKDLNHNLPYVRDKIVEYLNKLIALGVAGFRVDA 213
A R+ +L + LNH++ +RDKI + ++L+ + VAG + DA
Sbjct: 859 ALARSIELQRREGLNHHISNLRDKIWKLKSQLVRMQVAGEKPDA 902
>09_04_0391 + 17248698-17248790,17248913-17249851,17249942-17250223
Length = 437
Score = 31.9 bits (69), Expect = 0.87
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 304 DRVVVFIDNHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFFD 354
++ V FIDNHDT + + + K + A+ L HP G P + + FD
Sbjct: 303 EKAVTFIDNHDTGSTQNSWPFPSDKVMQ-GYAYILTHP-GVPCIFYDHVFD 351
>01_06_0490 +
29759801-29759880,29759881-29759980,29760468-29760574,
29761305-29761554,29761989-29762111,29762471-29762638,
29762741-29762878,29763206-29763235
Length = 331
Score = 30.7 bits (66), Expect = 2.0
Identities = 53/269 (19%), Positives = 97/269 (36%), Gaps = 32/269 (11%)
Query: 99 DEFLNMTRRCNDVGIRIYADVVINHMTSDNRESVGTGGSTANYKEYSYPAVPYTRDHFHH 158
+E +R ++ G+++ D V+NH + + G + AV HF
Sbjct: 2 EELKEAVKRFHEAGMKVLGDAVLNHRCAQFQNQNGVWNIFGGRLNWDDRAVVADDPHFQ- 60
Query: 159 PSCSINNYNDAAQVRACDLVGLKDLNHNLPYVRDKIVEYLNKL-IALGVAGFRVDAAKHM 217
N + A +++H+ +VR + E+L + +G G+R+D +
Sbjct: 61 ---GRGNKSSGDNFHAA-----PNIDHSQEFVRSDLKEWLCWMRKEVGYDGWRLDFVRGF 112
Query: 218 WPHDLKEMYNRLNNLNVDFGFLPNTKPYIYQEVIYRGNEPIQHTEYTPFGDVTEFRVG-Y 276
W + + Y + G ++ Y Y E+ Y N+ + + T G +
Sbjct: 113 WGGYVHD-YLEASEPYFAVGEYWDSLSYTYGEMDY--NQDAHRQRIVDWINATNGTAGAF 169
Query: 277 ELKPVFEGKNPLKWLKSWGENWNLSPS------------DRVVVFIDNHDTQRSNEVLTY 324
++ K L E W LS R V FI+NHDT + +
Sbjct: 170 DVTT----KGILHSALERSEYWRLSDEKGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRF 225
Query: 325 KNAKSYKAAIAFTLAHPYGEPRVMSGYFF 353
+ + + L HP G P + + F
Sbjct: 226 PFGMELQGYV-YILTHP-GTPAIFYDHIF 252
>08_01_0041 - 290333-290698,290854-291861
Length = 457
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 310 IDNHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPR 346
ID+H T+RS+ VL N +S + ++ H YG R
Sbjct: 258 IDDHATKRSSSVLDLDNEESDFIDVLLSIQHEYGLTR 294
>05_07_0182 +
28243881-28245406,28245460-28245505,28246309-28246400,
28246513-28246635,28246753-28246984
Length = 672
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/74 (24%), Positives = 26/74 (35%)
Query: 294 WGENWNLSPSDRVVVFIDNHDTQRSNEVLTYKNAKSYKAAIAFTLAHPYGEPRVMSGYFF 353
WG+ W D F D+ + +T K + A P G PR +
Sbjct: 454 WGDGWVGENDDSPPDFEDDDGSSLKEVKVTMKKTANSANGKAHVPVFPDGRPRERCYFII 513
Query: 354 DRTDQGPPSDGNEE 367
R Q P S ++E
Sbjct: 514 SRKSQNPQSFESQE 527
>04_01_0332 +
4378111-4378329,4378862-4378997,4379113-4379165,
4379286-4379394,4379467-4379603,4379698-4379894,
4379979-4380128,4380233-4380293,4380380-4380500,
4380901-4380991,4381116-4381209,4381446-4381541,
4382176-4382316,4382592-4382642,4383093-4383161,
4384072-4384142,4384244-4384336,4384820-4384910,
4386164-4386235,4387226-4387351,4387537-4387593,
4387926-4388000,4388570-4388658,4388814-4388891,
4389308-4389446,4389868-4389977,4390151-4390250,
4390548-4390655
Length = 977
Score = 29.5 bits (63), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 100 EFLNMTRRCNDVGIRIYADVVINHMTS 126
E+ M + N +G+R+ DVV NH+ S
Sbjct: 450 EYRQMVQALNRIGLRVVMDVVYNHLDS 476
>03_01_0596 +
4398920-4398982,4399395-4399797,4400234-4400340,
4400458-4400523
Length = 212
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 142 KEYSYPAVPYTRDHFHHPSCSINNYNDAAQVRACD 176
++Y PA P+ + HF CS N NDAA+ D
Sbjct: 89 RKYCLPASPWIQ-HFRPRECSSNARNDAAEALVGD 122
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,719,746
Number of Sequences: 37544
Number of extensions: 510578
Number of successful extensions: 949
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 921
Number of HSP's gapped (non-prelim): 34
length of query: 379
length of database: 14,793,348
effective HSP length: 83
effective length of query: 296
effective length of database: 11,677,196
effective search space: 3456450016
effective search space used: 3456450016
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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