Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005237-TA|BGIBMGA005237-PA|IPR003599|Immunoglobulin
subtype, IPR008957|Fibronectin, type III-like fold,
IPR013106|Immunoglobulin V-set
(309 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 39 0.005
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 37 0.016
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 32 0.45
AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. 31 1.0
AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical ... 31 1.0
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 31 1.4
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 31 1.4
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 31 1.4
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 31 1.4
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 31 1.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.4
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 31 1.4
Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 2.4
AL110484-2|CAB54393.1| 267|Caenorhabditis elegans Hypothetical ... 30 2.4
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 30 2.4
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical... 29 3.2
Z81065-4|CAI79162.1| 176|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81038-17|CAI79154.1| 176|Caenorhabditis elegans Hypothetical p... 29 4.2
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 4.2
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 4.2
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 4.2
Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 7.3
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 7.3
U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis ... 28 9.7
U39667-7|AAP31442.1| 324|Caenorhabditis elegans Disorganized mu... 28 9.7
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 28 9.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 9.7
BX677430-1|CAI79176.1| 340|Caenorhabditis elegans Hypothetical ... 28 9.7
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 28 9.7
AF500489-1|AAM21705.1| 324|Caenorhabditis elegans DIM-1 short p... 28 9.7
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 9.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 9.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 9.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 9.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 9.7
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
1 protein.
Length = 1073
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 86 ATEN-SITIENLEP-SASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDV 143
AT N S+ I +E S G Y C V S + V+ P I T V
Sbjct: 97 ATGNYSLRITEVEKNSVEGTYHCNVIGTDDSDVQYSALATVVVLVPPGDPIISTTPSESV 156
Query: 144 VVGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYR 184
+ G + A C S +P P TW + N+ + +I +R
Sbjct: 157 IEGDFMTAKCVSVGGSPQPTFTWTLPNDTIASSAIFTTQFR 197
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 121 PHRLTVVYAQKHPP--IITFGKPDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSI 178
P R + +PP + FG+ ++ G C S P+ PA ++TW I+ VP +
Sbjct: 318 PKRKAMKLEVNYPPASVELFGESNIRYGSSANIQCKSLPSNPASQITWIINGRSVPTPTQ 377
Query: 179 KFF 181
+ F
Sbjct: 378 REF 380
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 95 NLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVVVGGLLRANCT 154
N SG Y C+ + I A L V A + P+ + K ++GG+ +A C
Sbjct: 839 NATEQQSGEYTCKA--DNGIGVPAEGQTFLLVNSAPRVLPVARYAKTAGILGGVAKARC- 895
Query: 155 SAPAAPAPKLTWYIDNEKVPEDSIKF 180
A P + W D + + ++S K+
Sbjct: 896 KVYAVPTVEFVWEKDEQLIKKNSSKY 921
Score = 31.9 bits (69), Expect = 0.60
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 14/151 (9%)
Query: 32 GGSATLRCLHQVPPQLLYKVEFLTSEAKLLQYVRERVPPFTNYSFPGGRINMSLATENSI 91
G S T RC + P+ + ++ ++ LL Y +E + P F + N A E +
Sbjct: 33 GESITFRCSAEKSPEPIVYSQWKSNTGSLLGYHQEGILPGHQGRFSYIKQN---AEELHL 89
Query: 92 TIENLEPSASGLYWCEV--SLETPI----FTAASPPHRLTVVYAQKHPPIITFGKPDVVV 145
I ++ G Y C++ E PI F P +L V ++ P I K +
Sbjct: 90 KITHVNLDDDGEYECQMLHPEEGPIRAKSFLNIIVPPQL-VYFSNYQPNSIIAVKENTP- 147
Query: 146 GGLLRANCTSAPAAPAPKLTWYIDNEKVPED 176
L C P P++ WY+D + + D
Sbjct: 148 ---LNITCVVPNVKPEPEVLWYMDGKVMSRD 175
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 32.3 bits (70), Expect = 0.45
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Query: 101 SGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVVVGGLLRANCTSAPAAP 160
SGL V E P+ + P L A+K+P +T+ + +AP+A
Sbjct: 8 SGLMAVLVHCEYPVLDSYPTPPPLYPT-AKKYPVALTYKSSPAESEVKPTYSAVAAPSAE 66
Query: 161 APKLTWYIDNEKVPEDSIKFFSYRVSSSTRTKGGGGYRHRKHQ 203
K ++ D + EDS+ R + RT Y HR+ Q
Sbjct: 67 VSK--FFSDEDNAAEDSVSTSESRKRAKARTAHNRQYLHRELQ 107
>AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein.
Length = 167
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 233 TKHHKCTLKEAQTEEMAKMQEKPRPPPVVPISLWVSIAELRAPAHGRLQLT-CTATIPDE 291
TK +LK Q+ K + P PP P S E P+ T T T+PD+
Sbjct: 65 TKSRSKSLKSKQSAVTPKKRASPIPPQPAPPSSPKPTEESATPSSSFAPSTEPTPTVPDK 124
Query: 292 VGPGEKYADIKKQ 304
V G + + K+Q
Sbjct: 125 VDDGSEDTEHKEQ 137
>AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical
protein T06A4.2 protein.
Length = 167
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 233 TKHHKCTLKEAQTEEMAKMQEKPRPPPVVPISLWVSIAELRAPAHGRLQLT-CTATIPDE 291
TK +LK Q+ K + P PP P S E P+ T T T+PD+
Sbjct: 65 TKSRSKSLKSKQSAVTPKKRASPIPPQPAPPSSPKPTEESATPSSSFAPSTEPTPTVPDK 124
Query: 292 VGPGEKYADIKKQ 304
V G + + K+Q
Sbjct: 125 VDDGSEDTEHKEQ 137
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 88 ENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVV--- 144
E S+ L+ S +GLY CE E TA P R+ + +H +P+VV
Sbjct: 101 EGSLVFSRLDESDAGLYQCEA--ENSNGTAVDRPVRVQETWI-RH---FKTAEPEVVVVE 154
Query: 145 VGGLLRANCTSAPAAPAPKLTWYI 168
VG + NC+ + P ++ W +
Sbjct: 155 VGDPYQRNCSPPASNPYARVYWIL 178
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 88 ENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVV--- 144
E S+ L+ S +GLY CE E TA P R+ + +H +P+VV
Sbjct: 101 EGSLVFSRLDESDAGLYQCEA--ENSNGTAVDRPVRVQETWI-RH---FKTAEPEVVVVE 154
Query: 145 VGGLLRANCTSAPAAPAPKLTWYI 168
VG + NC+ + P ++ W +
Sbjct: 155 VGDPYQRNCSPPASNPYARVYWIL 178
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 151 ANCTSAPAAPAPKLTWYIDNEKVPED----SIKFFSYRVSS-STRTKGGGGYRHRKHQHR 205
A S P+ W+ + + +D ++ F R+++ ++ G Y H QHR
Sbjct: 75 AESVSTEKKDPPRKVWHHNGSQTGKDWMLRNVSFDQIRITNRKSKEDGNASYVHLLTQHR 134
Query: 206 YIAPEFNYTAKYWALISETTASPPLNLTKHHKCTLKEAQT 245
YI Y + S +++T +HK L +T
Sbjct: 135 YIPVLTIYEGDQLVHTARIPHSQFISVTAYHKGELNTLKT 174
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 145 VGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSY 183
VG L+ P+PK+ WY D++++ S+K+ S+
Sbjct: 440 VGDLIATLSCDVDGVPSPKVQWYKDDKELTVPSMKYDSF 478
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 145 VGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSY 183
VG L+ P+PK+ WY D++++ S+K+ S+
Sbjct: 455 VGDLIATLSCDVDGVPSPKVQWYKDDKELTVPSMKYDSF 493
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 145 VGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSY 183
VG L+ P+PK+ WY D++++ S+K+ S+
Sbjct: 16266 VGDLIATLSCDVDGVPSPKVQWYKDDKELTVPSMKYDSF 16304
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 119 SPPHRLTVVYAQKHPPIITFGKP-DVVVGGLLRANCTSAPAAPAPKLTWYID-NEKVPED 176
S P VV A P ++ KP + G LR C +A PAP+ WY D E +P D
Sbjct: 14437 SEPTIPVVVLADDAPRVLKAIKPVKIPKKGELRLECHAA-GHPAPEYIWYKDGKEIIPTD 14495
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 145 VGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSY 183
VG L+ P+PK+ WY D++++ S+K+ S+
Sbjct: 16281 VGDLIATLSCDVDGVPSPKVQWYKDDKELTVPSMKYDSF 16319
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 119 SPPHRLTVVYAQKHPPIITFGKP-DVVVGGLLRANCTSAPAAPAPKLTWYID-NEKVPED 176
S P VV A P ++ KP + G LR C +A PAP+ WY D E +P D
Sbjct: 14437 SEPTIPVVVLADDAPRVLKAIKPVKIPKKGELRLECHAA-GHPAPEYIWYKDGKEIIPTD 14495
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 88 ENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVV--- 144
E S+ L+ S +GLY CE E TA P R+ + +H +P+VV
Sbjct: 101 EGSLVFSRLDESDAGLYQCEA--ENSNGTAVDRPVRVQETWI-RH---FKTAEPEVVVVE 154
Query: 145 VGGLLRANCTSAPAAPAPKLTWYI 168
VG + NC+ + P ++ W +
Sbjct: 155 VGDPYQRNCSPPASNPYARVYWIL 178
>Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical
protein F14B6.4 protein.
Length = 357
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 195 GGYRHRKHQHRYIAPEFN--------YTAKYWALISETTASPPLNLTKH 235
GGY +R +HR+ P+ YT + L+++ A LN TKH
Sbjct: 226 GGYVYRDKEHRWFVPDSTYGCDMFPPYTGGLFYLVTQDAAKKILNATKH 274
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 77 PGGRINMSLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPII 136
P R + ++ +N++ + + S SG+Y C+ + +A + T + + P+I
Sbjct: 1043 PNSR-DFTVTADNTLIVRKADKSYSGVYTCQAT------NSAGDNEQKTTIRIM-NTPMI 1094
Query: 137 TFGKP--DVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPE 175
+ G+ ++VV L C P P +TW +D++ E
Sbjct: 1095 SPGQSSFNMVVDDLFTIPC-DVYGDPKPVITWLLDDKPFTE 1134
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 9/111 (8%)
Query: 90 SITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVVVGGLL 149
S+ I+N++P+ G Y C A + T V + P ++ + VV G
Sbjct: 3090 SLRIDNIKPNQEGRYTCVAE------NKAGRAEQDTYVEISEPPRVVMASEVMRVVEGRQ 3143
Query: 150 RANCTSAPAAPAPKLTWYIDNEKVPEDSIKF---FSYRVSSSTRTKGGGGY 197
P P + W D E D ++F SY T GG Y
Sbjct: 3144 TTIRCEVFGNPEPVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTY 3194
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDS----IKFFSYRVSSSTRTKGGGG 196
P V GG + C P P +TW ++ VP DS + + +++S T T+ G
Sbjct: 3400 PKAVAGGEIILKCPVL-GNPTPTVTWKRGDDAVPNDSRHTIVNNYDLKINSVT-TEDAGQ 3457
Query: 197 Y 197
Y
Sbjct: 3458 Y 3458
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 77 PGGRINMSLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPII 136
P R + ++ +N++ + + S SG+Y C+ + +A + T + + P+I
Sbjct: 1043 PNSR-DFTVTADNTLIVRKADKSYSGVYTCQAT------NSAGDNEQKTTIRIM-NTPMI 1094
Query: 137 TFGKP--DVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPE 175
+ G+ ++VV L C P P +TW +D++ E
Sbjct: 1095 SPGQSSFNMVVDDLFTIPC-DVYGDPKPVITWLLDDKPFTE 1134
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 9/111 (8%)
Query: 90 SITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVVVGGLL 149
S+ I+N++P+ G Y C A + T V + P ++ + VV G
Sbjct: 3090 SLRIDNIKPNQEGRYTCVAE------NKAGRAEQDTYVEISEPPRVVMASEVMRVVEGRQ 3143
Query: 150 RANCTSAPAAPAPKLTWYIDNEKVPEDSIKF---FSYRVSSSTRTKGGGGY 197
P P + W D E D ++F SY T GG Y
Sbjct: 3144 TTIRCEVFGNPEPVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTY 3194
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDS----IKFFSYRVSSSTRTKGGGG 196
P V GG + C P P +TW ++ VP DS + + +++S T T+ G
Sbjct: 3400 PKAVAGGEIILKCPVL-GNPTPTVTWKRGDDAVPNDSRHTIVNNYDLKINSVT-TEDAGQ 3457
Query: 197 Y 197
Y
Sbjct: 3458 Y 3458
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 77 PGGRINMSLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPII 136
P R + ++ +N++ + + S SG+Y C+ + +A + T + + P+I
Sbjct: 1043 PNSR-DFTVTADNTLIVRKADKSYSGVYTCQAT------NSAGDNEQKTTIRIM-NTPMI 1094
Query: 137 TFGKP--DVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPE 175
+ G+ ++VV L C P P +TW +D++ E
Sbjct: 1095 SPGQSSFNMVVDDLFTIPC-DVYGDPKPVITWLLDDKPFTE 1134
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 9/111 (8%)
Query: 90 SITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVVVGGLL 149
S+ I+N++P+ G Y C A + T V + P ++ + VV G
Sbjct: 3090 SLRIDNIKPNQEGRYTCVAE------NKAGRAEQDTYVEISEPPRVVMASEVMRVVEGRQ 3143
Query: 150 RANCTSAPAAPAPKLTWYIDNEKVPEDSIKF---FSYRVSSSTRTKGGGGY 197
P P + W D E D ++F SY T GG Y
Sbjct: 3144 TTIRCEVFGNPEPVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTY 3194
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDS----IKFFSYRVSSSTRTKGGGG 196
P V GG + C P P +TW ++ VP DS + + +++S T T+ G
Sbjct: 3400 PKAVAGGEIILKCPVL-GNPTPTVTWKRGDDAVPNDSRHTIVNNYDLKINSVT-TEDAGQ 3457
Query: 197 Y 197
Y
Sbjct: 3458 Y 3458
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 77 PGGRINMSLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPII 136
P R + ++ +N++ + + S SG+Y C+ + +A + T + + P+I
Sbjct: 1043 PNSR-DFTVTADNTLIVRKADKSYSGVYTCQAT------NSAGDNEQKTTIRIM-NTPMI 1094
Query: 137 TFGKP--DVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPE 175
+ G+ ++VV L C P P +TW +D++ E
Sbjct: 1095 SPGQSSFNMVVDDLFTIPC-DVYGDPKPVITWLLDDKPFTE 1134
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 9/111 (8%)
Query: 90 SITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVVVGGLL 149
S+ I+N++P+ G Y C A + T V + P ++ + VV G
Sbjct: 3090 SLRIDNIKPNQEGRYTCVAE------NKAGRAEQDTYVEISEPPRVVMASEVMRVVEGRQ 3143
Query: 150 RANCTSAPAAPAPKLTWYIDNEKVPEDSIKF---FSYRVSSSTRTKGGGGY 197
P P + W D E D ++F SY T GG Y
Sbjct: 3144 TTIRCEVFGNPEPVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTY 3194
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDS----IKFFSYRVSSSTRTKGGGG 196
P V GG + C P P +TW ++ VP DS + + +++S T T+ G
Sbjct: 3400 PKAVAGGEIILKCPVL-GNPTPTVTWKRGDDAVPNDSRHTIVNNYDLKINSVT-TEDAGQ 3457
Query: 197 Y 197
Y
Sbjct: 3458 Y 3458
>AL110484-2|CAB54393.1| 267|Caenorhabditis elegans Hypothetical
protein Y38E10A.2 protein.
Length = 267
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 163 KLTWYIDNEKVPEDSIKFFSYRVSSSTRTKGGGGYRHRKHQHRYIAPEFNYTAKYWALIS 222
+++WY + ++K + + ST G +R + Y P+ Y A YW + +
Sbjct: 15 QISWYNAMKLYNNYALKPILFAGNDSTADYSGETWRDACYHRFYAQPDALYVA-YWLVEN 73
Query: 223 E-TTASPPLNLTKHHKCTLKEAQTEE 247
+ TT +PP + + +CT T++
Sbjct: 74 DATTTTPP--MAWNFECTYPMMSTQQ 97
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 77 PGGRINMSLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPII 136
P R + ++ +N++ + + S SG+Y C+ + +A + T + + P+I
Sbjct: 1043 PNSR-DFTVTADNTLIVRKADKSYSGVYTCQAT------NSAGDNEQKTTIRIM-NTPMI 1094
Query: 137 TFGKP--DVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPE 175
+ G+ ++VV L C P P +TW +D++ E
Sbjct: 1095 SPGQSSFNMVVDDLFTIPC-DVYGDPKPVITWLLDDKPFTE 1134
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 9/111 (8%)
Query: 90 SITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFGKPDVVVGGLL 149
S+ I+N++P+ G Y C A + T V + P ++ + VV G
Sbjct: 3090 SLRIDNIKPNQEGRYTCVAE------NKAGRAEQDTYVEISEPPRVVMASEVMRVVEGRQ 3143
Query: 150 RANCTSAPAAPAPKLTWYIDNEKVPEDSIKF---FSYRVSSSTRTKGGGGY 197
P P + W D E D ++F SY T GG Y
Sbjct: 3144 TTIRCEVFGNPEPVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTY 3194
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDS----IKFFSYRVSSSTRTKGGGG 196
P V GG + C P P +TW ++ VP DS + + +++S T T+ G
Sbjct: 3400 PKAVAGGEIILKCPVL-GNPTPTVTWKRGDDAVPNDSRHTIVNNYDLKINSVT-TEDAGQ 3457
Query: 197 Y 197
Y
Sbjct: 3458 Y 3458
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 80 RINMSLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFG 139
++ S +TE IT +EP + + E+ + P +V+ +H + T
Sbjct: 306 KMQASSSTEPPITTTTMEPMTTSTMDSMDTTESVVTMTTMPEIDTKIVF--EHKQLDTTS 363
Query: 140 KPDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPE 175
+ G L C A P P +TW + +K+ E
Sbjct: 364 RD----GETLELKC-EASGEPTPTITWLFEKQKLTE 394
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 80 RINMSLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPIITFG 139
++ S +TE IT +EP + + E+ + P +V+ +H + T
Sbjct: 306 KMQASSSTEPPITTTTMEPMTTSTMDSMDTTESVVTMTTMPEIDTKIVF--EHKQLDTTS 363
Query: 140 KPDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVPE 175
+ G L C A P P +TW + +K+ E
Sbjct: 364 RD----GETLELKC-EASGEPTPTITWLFEKQKLTE 394
>AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical
protein Y48G1C.7 protein.
Length = 623
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 47 LLYKVEFLTSEAKLLQYVRER--VPPFTNYSFPGGRINMSLATENSITIENLEPSASGLY 104
LL+K+ F SE +LLQ V V G +++ +A + +I E +E G
Sbjct: 484 LLFKMLFEKSEHRLLQIVNHTFGVEIMAGEEMDNGEMHLHMAPDGAIVEEIVEEEVIGTV 543
Query: 105 WCEVSLETPI 114
+V+LE +
Sbjct: 544 GDDVNLEEEV 553
>Z81065-4|CAI79162.1| 176|Caenorhabditis elegans Hypothetical
protein F16C3.4 protein.
Length = 176
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 16 ATDVDVRLTAPSWVARGGSATLRCLHQVPPQLLYKVEFLTSEAKLLQYVRERVPPFTN 73
A+D +V+ PS RG S +L+ +V L + SE K ++ VRER PP T+
Sbjct: 80 ASDENVQKD-PSLKKRGSSRSLKQPPKVLAPPLCLTKQCNSETKKMRVVRERSPPKTS 136
>Z81038-17|CAI79154.1| 176|Caenorhabditis elegans Hypothetical
protein F16C3.4 protein.
Length = 176
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 16 ATDVDVRLTAPSWVARGGSATLRCLHQVPPQLLYKVEFLTSEAKLLQYVRERVPPFTN 73
A+D +V+ PS RG S +L+ +V L + SE K ++ VRER PP T+
Sbjct: 80 ASDENVQKD-PSLKKRGSSRSLKQPPKVLAPPLCLTKQCNSETKKMRVVRERSPPKTS 136
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 84 SLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQK---HPPIITFGK 140
+L ++ ++ I+ ++ S SG Y C + + S P RL+V K P +T
Sbjct: 183 TLHSDGNLIIDPVDRSDSGTYQCVAN--NMVGERVSNPARLSVFEKPKFEQEPKDMT--- 237
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVP 174
V VG + +C P P++TW NE +P
Sbjct: 238 --VDVGAAVLFDCR-VTGDPQPQITWKRKNEPMP 268
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 134 PIITFGKPDVVV--GGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYRVSSST 189
P+I DVVV G NC + P+ K+TWY D + V + + S+R+ T
Sbjct: 31 PVIIEHPIDVVVSRGSPATLNCGAKPSTA--KITWYKDGQPVITNKEQVNSHRIVLDT 86
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 84 SLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQK---HPPIITFGK 140
+L ++ ++ I+ ++ S SG Y C + + S P RL+V K P +T
Sbjct: 183 TLHSDGNLIIDPVDRSDSGTYQCVAN--NMVGERVSNPARLSVFEKPKFEQEPKDMT--- 237
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVP 174
V VG + +C P P++TW NE +P
Sbjct: 238 --VDVGAAVLFDCR-VTGDPQPQITWKRKNEPMP 268
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 134 PIITFGKPDVVV--GGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYRVSSST 189
P+I DVVV G NC + P+ K+TWY D + V + + S+R+ T
Sbjct: 31 PVIIEHPIDVVVSRGSPATLNCGAKPSTA--KITWYKDGQPVITNKEQVNSHRIVLDT 86
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 84 SLATENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQK---HPPIITFGK 140
+L ++ ++ I+ ++ S SG Y C + + S P RL+V K P +T
Sbjct: 183 TLHSDGNLIIDPVDRSDSGTYQCVAN--NMVGERVSNPARLSVFEKPKFEQEPKDMT--- 237
Query: 141 PDVVVGGLLRANCTSAPAAPAPKLTWYIDNEKVP 174
V VG + +C P P++TW NE +P
Sbjct: 238 --VDVGAAVLFDCR-VTGDPQPQITWKRKNEPMP 268
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 134 PIITFGKPDVVV--GGLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYRVSSST 189
P+I DVVV G NC + P+ K+TWY D + V + + S+R+ T
Sbjct: 31 PVIIEHPIDVVVSRGSPATLNCGAKPSTA--KITWYKDGQPVITNKEQVNSHRIVLDT 86
>Z81045-4|CAB54202.2| 402|Caenorhabditis elegans Hypothetical
protein C36F7.4b protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 120 PPHRLTVVYAQKHPPIITFGKPDVV--VGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDS 177
P TV PP++ V VG + R CT+ A P P++ W D E V E +
Sbjct: 220 PDESWTVKLLVTFPPLVQAQSETVQASVGSMARMVCTTE-AWPRPEMGWEKDGEPVYESN 278
Query: 178 IKFFSYRVS 186
++ VS
Sbjct: 279 NVAMTHTVS 287
>Z81045-3|CAB02817.3| 280|Caenorhabditis elegans Hypothetical
protein C36F7.4a protein.
Length = 280
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 120 PPHRLTVVYAQKHPPIITFGKPDVV--VGGLLRANCTSAPAAPAPKLTWYIDNEKVPEDS 177
P TV PP++ V VG + R CT+ A P P++ W D E V E +
Sbjct: 130 PDESWTVKLLVTFPPLVQAQSETVQASVGSMARMVCTTE-AWPRPEMGWEKDGEPVYESN 188
Query: 178 IKFFSYRVS 186
++ VS
Sbjct: 189 NVAMTHTVS 197
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 243 AQTEEMAKMQEKPRPPPVVPISLWVSIAELRAPAH 277
A ++A+ Q +P PPPV +S I L PAH
Sbjct: 365 AALNQLARNQMQPTPPPVPQVSQDNIINTLNFPAH 399
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 243 AQTEEMAKMQEKPRPPPVVPISLWVSIAELRAPAH 277
A ++A+ Q +P PPPV +S I L PAH
Sbjct: 365 AALNQLARNQMQPTPPPVPQVSQDNIINTLNFPAH 399
>U40942-9|AAC47074.6| 703|Caenorhabditis elegans Synaptogenesis
abnormal protein 1 protein.
Length = 703
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Query: 88 ENSITIENLEPSASGLYWCEVSLETPIFTAASPPHRLTVVYAQKHPPII-TFGKPDVVVG 146
E ++ I N+ + C++S S +LTV+ P I+ + + G
Sbjct: 86 EYNLEISNVTLFDDDDFACQISESDHAKAVVSSKAKLTVLVRPTPPKIVKSHHSLKAIAG 145
Query: 147 GLLRANCTSAPAAPAPKLTWYIDNEK 172
+ +C S P P + W I +++
Sbjct: 146 DPITQSCLSRKGKPPPTIGWAIASDE 171
>U39667-7|AAP31442.1| 324|Caenorhabditis elegans Disorganized
muscle protein 1,isoform b protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 147 GLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYRVSSSTRTKGGGGY 197
G L C A P P++ WY DN++V E+S +F S++ KG Y
Sbjct: 21 GSLELECF-VDANPTPQVKWYYDNKEV-ENSGRF-----SANLANKGSDSY 64
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 147 GLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYRVSSSTRTKGGGGY 197
G L C A P P++ WY DN++V E+S +F S++ KG Y
Sbjct: 337 GSLELECF-VDANPTPQVKWYYDNKEV-ENSGRF-----SANLANKGSDSY 380
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 127 VYAQKHPPIITFGKPDV--VVGGLLRANCTSAPAAPAPKLTWYIDNEKV-PEDSIK 179
V PP T DV G L+ C A+P P++ WY D V P D I+
Sbjct: 5694 VVTASQPPRFTLKMGDVRTTEGQPLKLEC-KVDASPLPEMVWYKDGAIVTPSDRIQ 5748
>BX677430-1|CAI79176.1| 340|Caenorhabditis elegans Hypothetical
protein VB0395L.1 protein.
Length = 340
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 69 PPFTNYSFPGGRINMSLATENSITIENLEPSASGLYWCEVSLETPIFTA 117
P YS P G I S+ NS+T S+SGL + L++P F A
Sbjct: 165 PRNLQYSLPNGTIRYSIVFGNSVT------SSSGLRYLMPCLDSPDFPA 207
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 147 GLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYRVSSSTRTKGGGGY 197
G L C A P P++ WY DN++V E+S +F S++ KG Y
Sbjct: 337 GSLELECF-VDANPTPQVKWYYDNKEV-ENSGRF-----SANLANKGSDSY 380
>AF500489-1|AAM21705.1| 324|Caenorhabditis elegans DIM-1 short
protein isoform protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 147 GLLRANCTSAPAAPAPKLTWYIDNEKVPEDSIKFFSYRVSSSTRTKGGGGY 197
G L C A P P++ WY DN++V E+S +F S++ KG Y
Sbjct: 21 GSLELECF-VDANPTPQVKWYYDNKEV-ENSGRF-----SANLANKGSDSY 64
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 127 VYAQKHPPIITFGKPDV--VVGGLLRANCTSAPAAPAPKLTWYIDNEKV-PEDSIK 179
V PP T DV G L+ C A+P P++ WY D V P D I+
Sbjct: 5054 VVTASQPPRFTLKMGDVRTTEGQPLKLEC-KVDASPLPEMVWYKDGAIVTPSDRIQ 5108
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 127 VYAQKHPPIITFGKPDV--VVGGLLRANCTSAPAAPAPKLTWYIDNEKV-PEDSIK 179
V PP T DV G L+ C A+P P++ WY D V P D I+
Sbjct: 5694 VVTASQPPRFTLKMGDVRTTEGQPLKLEC-KVDASPLPEMVWYKDGAIVTPSDRIQ 5748
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 127 VYAQKHPPIITFGKPDV--VVGGLLRANCTSAPAAPAPKLTWYIDNEKV-PEDSIK 179
V PP T DV G L+ C A+P P++ WY D V P D I+
Sbjct: 5694 VVTASQPPRFTLKMGDVRTTEGQPLKLEC-KVDASPLPEMVWYKDGAIVTPSDRIQ 5748
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 127 VYAQKHPPIITFGKPDV--VVGGLLRANCTSAPAAPAPKLTWYIDNEKV-PEDSIK 179
V PP T DV G L+ C A+P P++ WY D V P D I+
Sbjct: 5054 VVTASQPPRFTLKMGDVRTTEGQPLKLEC-KVDASPLPEMVWYKDGAIVTPSDRIQ 5108
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 127 VYAQKHPPIITFGKPDV--VVGGLLRANCTSAPAAPAPKLTWYIDNEKV-PEDSIK 179
V PP T DV G L+ C A+P P++ WY D V P D I+
Sbjct: 5694 VVTASQPPRFTLKMGDVRTTEGQPLKLEC-KVDASPLPEMVWYKDGAIVTPSDRIQ 5748
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,463,628
Number of Sequences: 27539
Number of extensions: 374424
Number of successful extensions: 1249
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1147
Number of HSP's gapped (non-prelim): 232
length of query: 309
length of database: 12,573,161
effective HSP length: 81
effective length of query: 228
effective length of database: 10,342,502
effective search space: 2358090456
effective search space used: 2358090456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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