Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005233-TA|BGIBMGA005233-PA|IPR004133|DAN,
IPR006207|Cystine knot, C-terminal
(232 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 31 0.19
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 30 0.25
SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces... 27 1.8
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofacto... 27 3.1
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 27 3.1
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 26 4.1
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 26 4.1
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 26 4.1
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 26 4.1
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 26 4.1
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 26 4.1
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 26 5.4
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 7.1
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 30.7 bits (66), Expect = 0.19
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 77 TYVQRNELGDGSSESGSIVSVPDQEDATEIPPGIEFRKILKSSKNALIVTKKEYLKEDWC 136
T + + LG S + I PD +ATE + F KS KN +V + L D
Sbjct: 283 TRILKESLGGNSRTTLIINCSPDSYNATETLSTLRFGHRAKSIKNKAVVNSE--LSVDEM 340
Query: 137 KTEPLVQKIREPGCI-PTTVINKFCYGQCNS 166
K + + K C+ + N Y C+S
Sbjct: 341 KRQLYIYKDALSRCVCGARINNNLDYNNCHS 371
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 30.3 bits (65), Expect = 0.25
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 138 TEPLVQKIREPGCIPTTVINKFCYGQCNSFYIPKGPRRRDNSDRPQPAFKSCSFCRPKNF 197
TE ++Q++ G I +TV N +GQC + + K R+N P + C + N+
Sbjct: 532 TEDMIQQLLTNGLISSTVDNDTYFGQCFACAVVKRTLERNNI-TASPECQQCYY----NY 586
Query: 198 TW 199
W
Sbjct: 587 CW 588
>SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 108 PGIEFRKI-LKSSKNALIVTKKEYLKEDWC 136
P IEFR + L+ ++NA+ V K+Y+ E C
Sbjct: 276 PPIEFRTVRLRKTRNAIGVPNKKYMIEGKC 305
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 116 LKSSKNALIVTKKEYLKEDWCKTEPLVQKIREPGCIPTTVINKFCYGQCN 165
+ S N L+ T +++++D L + PG IP +++NK C+
Sbjct: 226 INDSVNPLLNTYLDFIEKDIYLVSHLPVSEKHPGNIPISLVNKSVQAICS 275
>SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofactor
B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 50 LDIIDTKQVERFLEQRRRAEQATAPSTTYVQRNELG 85
LD D QV++++ R + E T + +RN+LG
Sbjct: 91 LDFDDLSQVDKYVMPREQYENRTDSVYAWKKRNQLG 126
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 26.6 bits (56), Expect = 3.1
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 6/97 (6%)
Query: 49 ILDIIDTKQVERFLEQRRRAEQATAPSTTYVQRNELGDGSSESGSIVSVPDQEDA---TE 105
+L +I LE+ + A P T + N GS+ +++ DQ+ T+
Sbjct: 84 LLKLITGDDGNSHLEKAQAATDLEYPVTKLLW-NPSSVGSNTDSQLLASTDQQLRLWKTD 142
Query: 106 IPPGIEFRKILKSSKNALIVTKKE--YLKEDWCKTEP 140
GI+ + ++S + + T DWCKT+P
Sbjct: 143 FEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDP 179
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 69 EQATAPSTTYVQRNELGDGSSESGSIVSVPDQEDATEIPPGIEFRKILKSSKNAL 123
+Q+ APS+ V R LG S+ +S P + + + ++ IL+ + +
Sbjct: 40 KQSNAPSSVTVPRTVLGGKSTNISKFISAPSTKKMSPMDISMDSPTILEPNSQGI 94
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 100 QEDATEIPPGIEFRKILKSSKNALIVTKKEYLKE 133
QE+++E+P E K+++S K+ KKE E
Sbjct: 17 QENSSEVPKAEEAGKVVESQKDTTSEEKKEETTE 50
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 101 EDATEIPPGIEFRKILKSSKNAL-------IVTKKEYLKEDWCKTEPLVQKIREPGCIPT 153
ED+ + P GIE KI+K ++ L V K Y+ E +++ + K+ +P
Sbjct: 356 EDSFDTPEGIELSKIIKQYRDDLNLSYVFGCVPKNYYMTEVSPQSDDSIFKLMTDRVLPE 415
Query: 154 TVINK 158
+ N+
Sbjct: 416 IITNR 420
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 188 SCSFCRPKNFTWITVTLRCPGQNPPFRR 215
S C PKNF W L G++ P+ R
Sbjct: 347 STEVCTPKNFIWPYAGLPNTGRSNPYAR 374
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 26.2 bits (55), Expect = 4.1
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 70 QATAPSTTYVQRNELGDGSSESGSIVSVPDQEDATE-IPPG--IEFRKILKSSKNALIVT 126
Q APS +YV ++ S E S + + D E T+ P I RK L S N+ V
Sbjct: 102 QTLAPSPSYVPLLKVIGSSEEVNSNLVLTDLETNTDGYDPKFLISVRKFLMGSPNSGFVV 161
Query: 127 KKE 129
K E
Sbjct: 162 KHE 164
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 101 EDATEIPPGIEFRKILKSSKNAL-------IVTKKEYLKEDWCKTEPLVQKIREPGCIPT 153
ED+ + P G+E K++K ++ L + K Y+ E + E + K+ +P
Sbjct: 356 EDSFDTPEGVELSKVIKQYRDDLNLSYVFGCIPKNYYMTEVSPQAEDSIFKLMVDHILPE 415
Query: 154 TVINK 158
++N+
Sbjct: 416 VLVNE 420
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 65 RRRAEQATAPSTTYVQRNELGDGSSESGSIVSVPDQEDAT 104
RRRA PS + + + D S+ +SV DQE T
Sbjct: 578 RRRASDCITPSISKILKMVSEDAKSQRIDELSVEDQEHTT 617
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 25.4 bits (53), Expect = 7.1
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 54 DTKQVERFLEQRRRAEQATAPSTTYVQRNELGDGSSESGSIVSVPDQEDATEIPPGIEFR 113
+TK + +++ Q A STT + +L S+E+G+ ++E +TE
Sbjct: 553 ETKSTPKKSKKKTSKAQQEANSTTAEGKEKLSGDSTETGNST---NKEASTEDTKANATA 609
Query: 114 KILKSSKNALIVTKKEYLKEDWCKTEPLVQKI 145
K + +++ +KE K P V KI
Sbjct: 610 SAPNKKKKTVETLQQQVIKEIARKEIPRVYKI 641
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.135 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,125,977
Number of Sequences: 5004
Number of extensions: 47582
Number of successful extensions: 127
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 16
length of query: 232
length of database: 2,362,478
effective HSP length: 71
effective length of query: 161
effective length of database: 2,007,194
effective search space: 323158234
effective search space used: 323158234
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)
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