GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005230-TA|BGIBMGA005230-PA|IPR012336|Thioredoxin-like
fold
         (312 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   2.6  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   2.6  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 215 YADFAIAGILLNNAVQLGKVNCLNERGLCQHE 246
           Y D  I  IL N  +    + C+ + G C +E
Sbjct: 25  YDDMDIDRILQNGRILTNYIKCMLDEGPCTNE 56


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 215 YADFAIAGILLNNAVQLGKVNCLNERGLCQHE 246
           Y D  I  IL N  +    + C+ + G C +E
Sbjct: 25  YDDMDIDRILQNGRILTNYIKCMLDEGPCTNE 56


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.136    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,675
Number of Sequences: 429
Number of extensions: 3387
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 2
length of query: 312
length of database: 140,377
effective HSP length: 58
effective length of query: 254
effective length of database: 115,495
effective search space: 29335730
effective search space used: 29335730
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)