Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005227-TA|BGIBMGA005227-PA|undefined
(104 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 29 0.20
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 28 0.26
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 27 0.46
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 27 0.46
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 27 0.80
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 27 0.80
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 27 0.80
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 26 1.1
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 26 1.4
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 25 1.8
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 25 2.4
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 25 2.4
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 25 3.2
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 25 3.2
SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces po... 24 4.3
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 24 4.3
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 24 5.6
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 24 5.6
SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces... 24 5.6
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 24 5.6
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 24 5.6
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 24 5.6
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 23 7.4
SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|... 23 7.4
SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr ... 23 7.4
SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces pomb... 23 7.4
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 23 7.4
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 23 7.4
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 23 9.8
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 23 9.8
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 23 9.8
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 23 9.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 23 9.8
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 28.7 bits (61), Expect = 0.20
Identities = 11/17 (64%), Positives = 15/17 (88%)
Query: 1 MGPSGAGKSSLMNALTG 17
+GP+GAGKS+L+ LTG
Sbjct: 706 IGPNGAGKSTLIKVLTG 722
Score = 27.9 bits (59), Expect = 0.35
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 2 GPSGAGKSSLMNALTGFSTKGVTGRIR 28
GP+G+GKS+LM A+ +G +R
Sbjct: 467 GPNGSGKSTLMRAIVNGQVEGFPTHLR 493
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 28.3 bits (60), Expect = 0.26
Identities = 11/17 (64%), Positives = 16/17 (94%)
Query: 1 MGPSGAGKSSLMNALTG 17
+GP+G+GKSSL++AL G
Sbjct: 647 IGPTGSGKSSLISALLG 663
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 27.5 bits (58), Expect = 0.46
Identities = 10/16 (62%), Positives = 16/16 (100%)
Query: 1 MGPSGAGKSSLMNALT 16
+GP+GAGKS+LM+A++
Sbjct: 31 IGPNGAGKSNLMDAIS 46
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 0.46
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 1 MGPSGAGKSSLMNALTGFSTKGVTGRI 27
+GPSG+GKS+L+N L GR+
Sbjct: 38 VGPSGSGKSTLINTLFSAHLMDSKGRL 64
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 26.6 bits (56), Expect = 0.80
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 1 MGPSGAGKSSLMNALTGFSTKGVTGRIRAGDCLCELRMWMNSPLVSRNLGSLKEYRKKSC 60
MG SGAGK++L+N L GV GD L R L S +++++
Sbjct: 917 MGESGAGKTTLLNVLAQRVDTGVV----TGDMLVN----------GRGLDS--TFQRRTG 960
Query: 61 YILQDDRLNPLFTVNELMTFAADMK 85
Y+ Q D TV E + F+A ++
Sbjct: 961 YVQQQDVHIGESTVREALRFSAALR 985
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 26.6 bits (56), Expect = 0.80
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 1 MGPSGAGKSSLMNAL 15
+GPS AGKSSL+N L
Sbjct: 245 LGPSNAGKSSLINLL 259
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 26.6 bits (56), Expect = 0.80
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 1 MGPSGAGKSSLMNALTG 17
+GP+GAGKS+L+ L G
Sbjct: 725 LGPNGAGKSTLIKVLIG 741
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 1.1
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 2 GPSGAGKSSLMNALTGFSTKGVTGRIRAGDCLCELRMWMNSPLVSRNLGSLKEY 55
GPSG GK+ L AL F IR ++ +M VSR +G+ Y
Sbjct: 621 GPSGTGKTLLTKALASFMFDDENAMIR-----IDMSEYMEKHSVSRLIGAPPGY 669
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 25.8 bits (54), Expect = 1.4
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 7/37 (18%)
Query: 2 GPSGAGKSSLMNAL-------TGFSTKGVTGRIRAGD 31
GPSG GKS+L+ L GFS T RAG+
Sbjct: 25 GPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGE 61
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 1.8
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 1 MGPSGAGKSSLMNALTG 17
+G +G GKS+L+N +TG
Sbjct: 422 VGKNGTGKSTLLNLITG 438
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 34 CELRMWMNSPLVSRNLGSLK 53
C LR W+NS ++S L LK
Sbjct: 1536 CFLRPWINSKIISAMLARLK 1555
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.0 bits (52), Expect = 2.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 1 MGPSGAGKSSLMNALTGFSTKGVTGRIRAGD 31
+G SG+GKS+L+N L T + GD
Sbjct: 101 LGESGSGKSTLVNTLLNRDVYPPTQKSLTGD 131
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 24.6 bits (51), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1 MGPSGAGKSSLMNALTGFSTKGVTGRIRAG 30
+G +GAGKS+L+ L+G S G I G
Sbjct: 36 VGANGAGKSTLLKLLSGKSL-AKAGHISVG 64
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/70 (20%), Positives = 29/70 (41%)
Query: 28 RAGDCLCELRMWMNSPLVSRNLGSLKEYRKKSCYILQDDRLNPLFTVNELMTFAADMKLG 87
+ GD + + + ++ + L+++ + +L ++ P F+ EL F G
Sbjct: 500 KEGDIMSGILIQKDANYKLMSAEDLRDFSDLTTTVLTQKQVIPFFSSMELANFHLKQMFG 559
Query: 88 NTLNDKTKLG 97
KTK G
Sbjct: 560 YVKQSKTKAG 569
>SPBC646.05c |erg9||squalene synthase Erg9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 24.2 bits (50), Expect = 4.3
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 23 VTGRIRAGDCLCELRMWMNSPLVSRNLGSLKEYRKKSCYILQD 65
+ RI CLC+ ++W + P + + R+ CY L D
Sbjct: 3 LANRIEEIRCLCQYKLWNDLPSYGEDENVPQNIRR--CYQLLD 43
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 24.2 bits (50), Expect = 4.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 1 MGPSGAGKSSLMNALTGF 18
+GP+G GK++L AL F
Sbjct: 538 LGPTGVGKTALTKALAEF 555
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1 MGPSGAGKSSLMNALTGFSTKG 22
+GP+G GK+++M L +G
Sbjct: 138 VGPAGVGKTAIMEGLASRIIRG 159
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 23.8 bits (49), Expect = 5.6
Identities = 8/15 (53%), Positives = 15/15 (100%)
Query: 1 MGPSGAGKSSLMNAL 15
+GP+G+GKS++++AL
Sbjct: 154 VGPNGSGKSNVIDAL 168
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 23.8 bits (49), Expect = 5.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 2 GPSGAGKSSLMNALTG 17
GP G+GK+S + AL G
Sbjct: 249 GPPGSGKTSFLYALAG 264
>SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 35 ELRMWMNSPLVSRNLGSLKEYRKKSCYILQDDRLNPL 71
EL+ N+ + + +L S+ ++ KK Y L D NP+
Sbjct: 296 ELKPSPNTTIRTSSLFSIPKFFKKKRYSLGQDDANPM 332
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 23.8 bits (49), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 1 MGPSGAGKSSLMNALTG--FSTKGVTGR 26
+GP+GAGKS+++ L T G+ R
Sbjct: 550 VGPNGAGKSTMLKLLIEQLHPTSGIVSR 577
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 23.8 bits (49), Expect = 5.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 1 MGPSGAGKSSLMNAL 15
MGP G GKS+L+ +L
Sbjct: 80 MGPPGTGKSTLIKSL 94
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 23.8 bits (49), Expect = 5.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 1 MGPSGAGKSSLMNALTGFSTKGVTGRIRAGD 31
+G GKSS++NAL S G + AG+
Sbjct: 275 IGYPNVGKSSVINALVNRSANGRSAPCPAGN 305
>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 23.4 bits (48), Expect = 7.4
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 31 DCLCELRMWMNSPL 44
D LCEL+ ++NSP+
Sbjct: 423 DGLCELQAYLNSPI 436
>SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 23.4 bits (48), Expect = 7.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 2 GPSGAGKSSLMNAL 15
GP G+GKS+L +AL
Sbjct: 32 GPQGSGKSTLASAL 45
>SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 409
Score = 23.4 bits (48), Expect = 7.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1 MGPSGAGKSSLMNALTGFSTK 21
+G +GKS+++NALT + K
Sbjct: 10 VGKPSSGKSTMLNALTDATAK 30
>SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 23.4 bits (48), Expect = 7.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 16 TGFSTKGVTGRIRAGDCLCELRMWMNSPL 44
TG + K TGR R ++R+W+ L
Sbjct: 101 TGIAGKLHTGRSRNDQVTTDMRLWLRDEL 129
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 23.4 bits (48), Expect = 7.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 1 MGPSGAGKSSLMNALTGFSTK 21
+G AGKS+L+N LT +K
Sbjct: 242 VGLPNAGKSTLLNCLTASKSK 262
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 23.4 bits (48), Expect = 7.4
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 84 MKLGNTLNDKTKLGVDNEVGI 104
+KL T NDK+KLG ++ VG+
Sbjct: 96 IKLDGT-NDKSKLGANSIVGV 115
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 23.0 bits (47), Expect = 9.8
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 34 CELRMWMNSPLVSRNLGSLKEYRKKSCYILQDDRLNPLFTVN 75
C R+W+ S+N+ LKE + + L+ + NP N
Sbjct: 742 CLGRVWLQRGRESKNVDYLKESVRYATLALEKNPENPSLLFN 783
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 23.0 bits (47), Expect = 9.8
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 1 MGPSGAGKSSLMNALTGFSTKGVTGRIRAGD-CLCELRMWMNSPLVSRNL 49
+G G GKSSL+ A G K R G + W+ + + N+
Sbjct: 615 VGKVGMGKSSLLEACLGNMQKHSGSVFRCGSIAYAAQQPWILNATIQENI 664
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 23.0 bits (47), Expect = 9.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 48 NLGSLKEYRKKSCYILQDDRLNPLFTVNELMT 79
+L L E RK+ C IL +F NEL +
Sbjct: 700 DLLKLSENRKEQCKILTQKLYTIVFRCNELQS 731
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 23.0 bits (47), Expect = 9.8
Identities = 7/15 (46%), Positives = 14/15 (93%)
Query: 1 MGPSGAGKSSLMNAL 15
+GP+G GKS++++A+
Sbjct: 39 IGPNGTGKSTIVSAI 53
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 1 MGPSGAGKSSLMNALTGFSTKGV 23
+GP+G GK+ + A++ + K V
Sbjct: 1889 IGPAGTGKTETVKAVSAYLGKNV 1911
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,271
Number of Sequences: 5004
Number of extensions: 16553
Number of successful extensions: 87
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 53
Number of HSP's gapped (non-prelim): 37
length of query: 104
length of database: 2,362,478
effective HSP length: 63
effective length of query: 41
effective length of database: 2,047,226
effective search space: 83936266
effective search space used: 83936266
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
- SilkBase 1999-2023 -