Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005222-TA|BGIBMGA005222-PA|IPR012981|Nop17p
(296 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001108-1|AAH01108.1| 290|Homo sapiens PIH1 domain containing ... 134 5e-31
AK000650-1|BAA91307.1| 290|Homo sapiens protein ( Homo sapiens ... 133 6e-31
BC019238-1|AAH19238.1| 315|Homo sapiens PIH1 domain containing ... 49 2e-05
BC101026-1|AAI01027.1| 490|Homo sapiens SASS6 protein protein. 36 0.17
AY359522-1|AAQ57128.1| 657|Homo sapiens hypothetical protein DK... 34 0.52
AL834265-1|CAD38940.1| 505|Homo sapiens hypothetical protein pr... 34 0.52
AL445928-1|CAH72248.1| 657|Homo sapiens novel protein protein. 34 0.52
AF022853-4|AAB83981.1| 1456|Homo sapiens multidrug resistance pr... 32 2.8
>BC001108-1|AAH01108.1| 290|Homo sapiens PIH1 domain containing 1
protein.
Length = 290
Score = 134 bits (323), Expect = 5e-31
Identities = 80/239 (33%), Positives = 128/239 (53%), Gaps = 16/239 (6%)
Query: 31 RAEKITILGRYGFCVKTTRIPDNKKVFVNICQTDAIPCPRDITNDELMYILSSEDPSSYR 90
R E I + GFC+KT KVF+NIC + +IP P D+T +EL+ +L ED + +R
Sbjct: 42 RPESTQIQPQPGFCIKTNS--SEGKVFINICHSPSIPPPADVTEEELLQMLE-EDQAGFR 98
Query: 91 VPMSIGEGRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEGLQDKYQFEI 150
+PMS+GE E D G TAYDVAVN +F+++++ + + +T+ EGL+DKY ++
Sbjct: 99 IPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGLEDKYNLQL 158
Query: 151 DMQKFTILKNRKSIGTLQSHRIQIRDIQQTESKIKPPLIEEIKGKALSRSEAAHRKNEIV 210
+ ++ ++KNR +G++ IR Q+ + L G+A S E H
Sbjct: 159 N-PEWRMMKNRPFMGSISQQ--NIRSEQRPRIQELGDLYTPAPGRAESGPEKPH------ 209
Query: 211 FRLRREPPTGEIEYLLAEFKIPASVEVKDLNLEVGEDRLVLDSKGVYEPVDFFLPCSVD 269
L E P + LLAE +P L+LE+GE+RLV+ +D ++P ++
Sbjct: 210 LNLWLEAP----DLLLAEIDLPKLDGALGLSLEIGENRLVMGGPQQLYHLDAYIPLQIN 264
>AK000650-1|BAA91307.1| 290|Homo sapiens protein ( Homo sapiens
cDNA FLJ20643 fis, clone KAT02633. ).
Length = 290
Score = 133 bits (322), Expect = 6e-31
Identities = 80/239 (33%), Positives = 128/239 (53%), Gaps = 16/239 (6%)
Query: 31 RAEKITILGRYGFCVKTTRIPDNKKVFVNICQTDAIPCPRDITNDELMYILSSEDPSSYR 90
R E I + GFC+KT KVF+NIC + +IP P D+T +EL+ +L ED + +R
Sbjct: 42 RPESTQIQPQPGFCIKTNS--SEGKVFINICHSPSIPPPADVTEEELLQMLE-EDQAGFR 98
Query: 91 VPMSIGEGRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEGLQDKYQFEI 150
+PMS+GE E D G TAYDVAVN +F+++++ + + +T+ EGL+DKY ++
Sbjct: 99 IPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGLEDKYNLQL 158
Query: 151 DMQKFTILKNRKSIGTLQSHRIQIRDIQQTESKIKPPLIEEIKGKALSRSEAAHRKNEIV 210
+ ++ ++KNR +G++ IR Q+ + L G+A S E H
Sbjct: 159 N-PEWRMMKNRPFMGSISQQ--NIRSEQRPRIQELGDLYTPAPGRAESGPEKPH------ 209
Query: 211 FRLRREPPTGEIEYLLAEFKIPASVEVKDLNLEVGEDRLVLDSKGVYEPVDFFLPCSVD 269
L E P + LLAE +P L+LE+GE+RLV+ +D ++P ++
Sbjct: 210 LNLWLEAP----DLLLAEVDLPKLDGALGLSLEIGENRLVMGGPQQLYHLDAYIPLQIN 264
>BC019238-1|AAH19238.1| 315|Homo sapiens PIH1 domain containing 2
protein.
Length = 315
Score = 49.2 bits (112), Expect = 2e-05
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 44 CVKTTRI-PDNKKVFVNICQTDAIPCPRDITNDELMYILSSEDPSSYRVPMSIGEGRTEH 102
C++T + P K +F+N+CQ IP P+ T+ VP+++G+
Sbjct: 53 CLQTRILKPKEKILFINLCQWTRIPAPQSTTHP---------------VPLTVGKPEDTT 97
Query: 103 DKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEGLQDKYQFEIDMQKFTILKNRK 162
+ S A T DVA NP+ EKD++ + + + + +++K+QF + + I K R
Sbjct: 98 EISDA-YTVIDVAYNPDVLHAAEKDQVKKNQLIQMAMKCIEEKFQFTLS-HSYHITKFRI 155
Query: 163 SIGTLQSHRIQIRDIQQTESKIKPPLIEEIKGKALSRSEAAHRKNEIVFRLRREPPTGEI 222
G++Q + + IQ ++ + E+ + S ++ + L ++ +G+
Sbjct: 156 K-GSIQRMKQNLMGIQTDSIDLREKMRRELTLGQIRSSTMSNPDHFPQLLLPKDQVSGKA 214
Query: 223 EYLLAEFKIPASVEVK-DLNLEVGEDRLVLD 252
L+ E +S E++ ++ + E ++V D
Sbjct: 215 VCLIEEI---SSTEIQVEMKMPAYELKIVHD 242
>BC101026-1|AAI01027.1| 490|Homo sapiens SASS6 protein protein.
Length = 490
Score = 35.9 bits (79), Expect = 0.17
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 143 QDKYQFEIDMQKFTI-LKNRKSIGTLQSH--RIQIRDIQQTESKIK-PPLIEEIKGKALS 198
Q +YQ + + QK + + ++++I LQ+ +++ + TE K K I E+K K
Sbjct: 58 QVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEVANKDLTERKYKGDSTIRELKAKLSG 117
Query: 199 RSEAAHRKNEIVFRLRREPPTGEIEYLLAEFKI-PASVEVKDLNLEV-GEDRLVLDSKGV 256
E R + V LRRE T ++E E + +V L E+ +D+LVL +K
Sbjct: 118 VEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEA 177
Query: 257 YEPV 260
++ +
Sbjct: 178 FDTI 181
>AY359522-1|AAQ57128.1| 657|Homo sapiens hypothetical protein
DKFZp761A078 protein.
Length = 657
Score = 34.3 bits (75), Expect = 0.52
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 143 QDKYQFEIDMQKFTI-LKNRKSIGTLQSHRIQIRDIQQ--TESKIK-PPLIEEIKGKALS 198
Q +YQ + + QK + + ++++I LQ+ ++ + TE K K I E+K K
Sbjct: 225 QVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLSG 284
Query: 199 RSEAAHRKNEIVFRLRREPPTGEIEYLLAEFKI-PASVEVKDLNLEV-GEDRLVLDSKGV 256
E R + V LRRE T ++E E + +V L E+ +D+LVL +K
Sbjct: 285 VEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEA 344
Query: 257 YEPV 260
++ +
Sbjct: 345 FDTI 348
>AL834265-1|CAD38940.1| 505|Homo sapiens hypothetical protein
protein.
Length = 505
Score = 34.3 bits (75), Expect = 0.52
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 143 QDKYQFEIDMQKFTI-LKNRKSIGTLQSHRIQIRDIQQ--TESKIK-PPLIEEIKGKALS 198
Q +YQ + + QK + + ++++I LQ+ ++ + TE K K I E+K K
Sbjct: 73 QVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLSG 132
Query: 199 RSEAAHRKNEIVFRLRREPPTGEIEYLLAEFKI-PASVEVKDLNLEV-GEDRLVLDSKGV 256
E R + V LRRE T ++E E + +V L E+ +D+LVL +K
Sbjct: 133 VEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEA 192
Query: 257 YEPV 260
++ +
Sbjct: 193 FDTI 196
>AL445928-1|CAH72248.1| 657|Homo sapiens novel protein protein.
Length = 657
Score = 34.3 bits (75), Expect = 0.52
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 143 QDKYQFEIDMQKFTI-LKNRKSIGTLQSHRIQIRDIQQ--TESKIK-PPLIEEIKGKALS 198
Q +YQ + + QK + + ++++I LQ+ ++ + TE K K I E+K K
Sbjct: 225 QVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLSG 284
Query: 199 RSEAAHRKNEIVFRLRREPPTGEIEYLLAEFKI-PASVEVKDLNLEV-GEDRLVLDSKGV 256
E R + V LRRE T ++E E + +V L E+ +D+LVL +K
Sbjct: 285 VEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEA 344
Query: 257 YEPV 260
++ +
Sbjct: 345 FDTI 348
>AF022853-4|AAB83981.1| 1456|Homo sapiens multidrug resistance
protein protein.
Length = 1456
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 225 LLAEF-KIPASVEVKDLNLEVGEDRLVLDSKGVYEPVDFFL---PCSVDQDIIDAQLDRN 280
LLAE K+ V +K +NL G+ + V ++ VY D +L P S + + N
Sbjct: 675 LLAEMDKVEGHVAIKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEN 734
Query: 281 IDGPNTPIKH 290
+ GP +K+
Sbjct: 735 VIGPKGMLKN 744
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.138 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,277,161
Number of Sequences: 224733
Number of extensions: 1693406
Number of successful extensions: 2926
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2918
Number of HSP's gapped (non-prelim): 9
length of query: 296
length of database: 73,234,838
effective HSP length: 89
effective length of query: 207
effective length of database: 53,233,601
effective search space: 11019355407
effective search space used: 11019355407
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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