GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005217-TA|BGIBMGA005217-PA|IPR007917|Protein of unknown
function UPF0224
         (101 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   0.73 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   1.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   1.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   1.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   1.7  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   2.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   3.9  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           20   6.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   6.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           20   6.8  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 0.73
 Identities = 10/51 (19%), Positives = 26/51 (50%)

Query: 48  QEDMKFHVLNCPSKTSIFPIEKPPKTVASITTPKIILQKEYLPETDPNHEI 98
           QE+ +   +  P + +  P+   P+   S ++PK + ++E    + P+ ++
Sbjct: 330 QEERRSEPVEPPRRKNNCPLHCKPELGQSQSSPKFVARREESNSSSPSLDL 380


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 1/21 (4%)

Query: 51  MKFH-VLNCPSKTSIFPIEKP 70
           M+ H +L+C  + +IFP + P
Sbjct: 178 MRRHLILSCQGRLNIFPFDDP 198


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 1/21 (4%)

Query: 51  MKFH-VLNCPSKTSIFPIEKP 70
           M+ H +L+C  + +IFP + P
Sbjct: 178 MRRHLILSCQGRLNIFPFDDP 198


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 1/21 (4%)

Query: 51  MKFH-VLNCPSKTSIFPIEKP 70
           M+ H +L+C  + +IFP + P
Sbjct: 229 MRRHLILSCQGRLNIFPFDDP 249


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 1/21 (4%)

Query: 51  MKFH-VLNCPSKTSIFPIEKP 70
           M+ H +L+C  + +IFP + P
Sbjct: 178 MRRHLILSCQGRLNIFPFDDP 198


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization
          protein protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 43 THRYTQEDMKFHVLNCPSKTSIFPIEKPPKTVASITTPKIILQKEYL 89
          TH   +++ + H+ NC  K  +  +   P+T    T   +   K ++
Sbjct: 52 THNELEKNRRAHLRNCLEKLKVL-VPLGPETSRHTTLGLLTKAKRFI 97


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 50  DMKFHVLNCPSKTSIFPIEKP 70
           +MK  +++CP   SI  +  P
Sbjct: 375 EMKGQMVHCPESDSILFVSSP 395


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 9  PYNPIHRVP 17
          PYNP H+ P
Sbjct: 64 PYNPEHKPP 72


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 7/29 (24%), Positives = 13/29 (44%)

Query: 9    PYNPIHRVPRSRLQRHIVKCEWINPTMIA 37
            P  P H    + L    ++  W++P + A
Sbjct: 1081 PEQPPHDTTCTTLTSQTIRISWMSPPLSA 1109


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 9  PYNPIHRVP 17
          PYNP H+ P
Sbjct: 65 PYNPEHKPP 73


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.455 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,563
Number of Sequences: 429
Number of extensions: 1421
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 101
length of database: 140,377
effective HSP length: 49
effective length of query: 52
effective length of database: 119,356
effective search space:  6206512
effective search space used:  6206512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)