GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005214-TA|BGIBMGA005214-PA|undefined
         (405 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    28   0.16 
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    24   2.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              24   2.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   2.7  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    23   4.7  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 221 EWQRFGRYTASVMRQEVSAYQSKLRELDDKQQELIHDNLELKELCLYLDEERERVVCSNC 280
           EW R G+Y +  +R  +SA Q KL    +  + +     E+ +   Y+  E+    C NC
Sbjct: 554 EWVRVGKYLSGELRLNMSAIQFKLGH-PEPPESVCSLPCEVGQAKKYVAGEQCCWHCFNC 612

Query: 281 GRTTGRERDD 290
            +   R+  D
Sbjct: 613 TQYQIRDHKD 622


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 2/90 (2%)

Query: 170 SNDQRRQIQALLNDIKALKEANRRLTEDNQEXXXXXXXXXXXXQKGRKLAREWQRFGRYT 229
           S D+ R+ +      + L     +L E+ +             QK  K  RE++++G+ +
Sbjct: 227 SRDRNREYRKKDRQYEKLHNEKEKLLEE-RTSRKRYSRSREREQKSYKNEREYRKYGKTS 285

Query: 230 ASVMRQEVSAYQSK-LRELDDKQQELIHDN 258
               R  +   +SK  + +     + IH+N
Sbjct: 286 KERSRDRMERERSKEPKIISSLSNKTIHNN 315


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 134 DDTQRAQRNLEEEQIHRRSADMLKFTKRVEPEGPRASNDQRRQIQALLND 183
           D+      N+E+E +      M+K    V+  G     + R  +QA+L+D
Sbjct: 45  DEVYNGNVNVEDENVQSYVECMMKKFNVVDENGNFNEKNTRDIVQAVLDD 94


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 258 NLELKELCLYLDEERERVVCSNC--GRTTGRERDDGDG 293
           NLE +EL  + + E    +C  C  G     +  DGDG
Sbjct: 252 NLEREELEQFAENEDLEELCRGCNLGHMISYDDTDGDG 289


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 34/155 (21%), Positives = 49/155 (31%), Gaps = 8/155 (5%)

Query: 19  KQAPEPVNFPPRYHPPPAAGAPRLSTVDATAKEFKPPYLSKTIDPSKLQYPTGIHGTVPG 78
           K   EP N  P Y P P    PRL       +E +P        P  +  P   H  +  
Sbjct: 8   KPEAEPGNNRPVYIPQPRPPHPRL------RREAEPEAEPGNNRPVYIPQPRPPHPRLRR 61

Query: 79  NYPSGSVPISKYPQGYPTGYPLPPGALRVLRPSGELITKAIVH--EPVEPTVRARSADDT 136
                + P +  P   P   P  P   R   P  E      V+  +P  P  R R   + 
Sbjct: 62  EAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEP 121

Query: 137 QRAQRNLEEEQIHRRSADMLKFTKRVEPEGPRASN 171
           +    N     I +      +  +  +PE    +N
Sbjct: 122 EAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNN 156


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,307
Number of Sequences: 429
Number of extensions: 6275
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 6
length of query: 405
length of database: 140,377
effective HSP length: 59
effective length of query: 346
effective length of database: 115,066
effective search space: 39812836
effective search space used: 39812836
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)