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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005207-TA|BGIBMGA005207-PA|IPR000873|AMP-dependent
synthetase and ligase
         (501 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr...   151   3e-37
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces...    80   8e-16
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo...    62   1e-10
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz...    59   1e-09
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi...    39   0.001
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy...    35   0.030
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr...    31   0.37 
SPAC2F7.13c |||tryptophan-tRNA ligase |Schizosaccharomyces pombe...    28   2.6  
SPAC869.09 |||conserved fungal protein|Schizosaccharomyces pombe...    27   6.1  
SPCC338.12 |||protease inhibitor |Schizosaccharomyces pombe|chr ...    27   6.1  
SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyce...    27   6.1  
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C...    27   8.0  
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb...    27   8.0  
SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|ch...    27   8.0  

>SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 512

 Score =  151 bits (365), Expect = 3e-37
 Identities = 98/347 (28%), Positives = 170/347 (48%), Gaps = 8/347 (2%)

Query: 143 KPSDGSIIHFTSGTTGEPKAALDSHLGVVNNTYFTGKRNTFHEGHHNICVQVPIFHALGS 202
           +P D  ++  TSGTTG PK    +H  +  + +         +      V +P+FH  G 
Sbjct: 159 QPDDVMLVLHTSGTTGRPKVVPLTHKNLCRSIHNITTSYRL-DPRDTSYVVMPLFHVHGL 217

Query: 203 IVTVLGGFRHGASLVLAAPIYDISANVKALFGEKCTAITGTPTMFVDILSQIRAQGQEVL 262
           +  +L     G   V+  P +   +  K       T  T  PT+   +L   R    + L
Sbjct: 218 LCGLLSTLASGGCAVVP-PKFSAHSFWKEFIQYGATWYTAVPTIHQILL---RTPPPKPL 273

Query: 263 SELRVAVAAGAPCSPQLIRDIQTHLNAESVKSLYGLTETTACIFQSNQGDSIDVVAETVG 322
             +R   +  +P +P ++  ++    A  +++ Y +TE +  +  +N    +     +VG
Sbjct: 274 PRIRFIRSCSSPLAPPVLSKLEATFRAPVLEA-YAMTEASHQM-TTNPLPPLVHKPHSVG 331

Query: 323 YIQDHVEVKVVNEQGEIVPFETPGELVVRGYNNMICYWNEPEKTRQTLDKDGWLKTGDKF 382
                VE+K+++++G  +P    GE+ VRG N    Y N P   + +  KD + +TGD+ 
Sbjct: 332 K-PFGVELKILDQKGNEMPQGKEGEICVRGINVTKGYLNNPAANKSSFTKDRFFRTGDEG 390

Query: 383 TISKDGYGRIVGRIKDIIVRGGENIAPKEIEDLLNTHPDVEESQVVGVSDKRVGEELCAV 442
            + KDGY  I GRIK+++ RGGE I+P EI+ +L  HPDV E+    V D++ G+++ A 
Sbjct: 391 KLDKDGYVFITGRIKELVNRGGEKISPAEIDAVLMQHPDVSEAVCFAVPDEKYGQDIQAA 450

Query: 443 VRLREGAALSLDDVTKHLTGEIARFKFPRILKVTQEFPKTASGKIQK 489
           +    G  ++   +  +L  ++A FK P+    T   PKTA+GK+Q+
Sbjct: 451 INPVAGKTVTPKQLHDYLEQKVAAFKIPKKFYFTDRIPKTATGKVQR 497


>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 662

 Score = 79.8 bits (188), Expect = 8e-16
 Identities = 126/514 (24%), Positives = 216/514 (42%), Gaps = 38/514 (7%)

Query: 5   AYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEM 64
           A  L++ G+  GDRV I+       +++++A  R G I  +I   +  + ++  +  SE 
Sbjct: 131 AGALQSMGVGMGDRVAIYMPMIPETIIAMLAIVRLGAIHSVIFAGFSAESVADRVNDSEC 190

Query: 65  KCLLIGDALPKREYYRTLEQLIPELKDGKPGLLKSREFPFLSSIIADGRNKLPGTISYKS 124
           K ++  D     E +R  ++ IP LK      L   E P +  ++   R+  P     + 
Sbjct: 191 KVIITAD-----ESHRGGKR-IP-LKGVVNKALT--ECPTIKKVLVFQRSAEPTASMVEG 241

Query: 125 LTEDYKNR-SEVSQYVKET--KPSDGSIIHFTSGTTGEPKAALDSHLGVVNNTYFTGKRN 181
               + +   +  +Y       P     + +TSG+TG+PK  +    G +     T K  
Sbjct: 242 RDVWWHDIIPKFPRYCPPAVVNPEHPLFLLYTSGSTGKPKGVVHCTGGYLLGAAATCKYV 301

Query: 182 -TFHEGHHNICVQVPIFHALGSIVTVLGGFRHGASLVL--AAPIY-DISANVKALFGEKC 237
              H      C    +    G    V G    GA+ ++  + P Y D S     +   + 
Sbjct: 302 FDLHPTDRMGCAG-DVGWITGHTYIVYGPLMLGAATLVFESTPAYPDYSRYWSVVERHRL 360

Query: 238 TAITGTPTMFVDILSQIRAQGQEVL----SELRVAVAAGAPCSPQLIRDIQTHLNAE--S 291
           T     PT     +  ++  G E +    S LRV  + G P +P+        +  +  +
Sbjct: 361 TQWYIAPTA----IRLLQRAGNEFVKHDRSSLRVLGSVGEPIAPESFMWYYEVVGEKRCA 416

Query: 292 VKSLYGLTETTACIFQSNQGDSIDVVAETVGYIQDHVEVKVVNE-QGEIVPF-ETPGELV 349
           V   Y  TET + I  S  G    +   +       ++  +++   G+I+   +  G L 
Sbjct: 417 VADTYWQTETGSHIVTS-LGPVTPMKPGSATLPFFGIDAVIIDPLTGKIIEGNDVEGVLA 475

Query: 350 VRGY--NNMICYWNEPEKTRQTLDKD--GWLKTGDKFTISKDGYGRIVGRIKDIIVRGGE 405
           +R    +     W   ++   T  K   G+  TGD  T  KDGY  I GR+ D++   G 
Sbjct: 476 IRSPWPSAARTVWRGHDRYIDTYLKPYPGFYFTGDGATRDKDGYIWIRGRVDDVVNISGH 535

Query: 406 NIAPKEIEDLLNTHPDVEESQVVGVSDKRVGEELCAVVRLREG--AALSLD-DVTKHLTG 462
            ++  EIE  L +H  V ES VVGV D+  G+ + A + L+ G  A + L+ ++   +  
Sbjct: 536 RLSTAEIEAALLSHDAVAESAVVGVHDELTGQAVNAFILLKPGYEATVELEKELIMAVRS 595

Query: 463 EIARFKFPRILKVTQEFPKTASGKIQKYRLREMI 496
            I  F  PR L +  + PKT SGKI +  LR+++
Sbjct: 596 TIGPFASPRKL-IFSDLPKTRSGKIMRRILRKIL 628


>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 689

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 296 YGLTETTACIFQSNQGDSIDVVAETVGYIQDHVEVKVVN--EQGEIVPFETP-GELVVRG 352
           YGLTET A  F  +  +   + A TVG+    +E K+V+  + G       P GE+ +RG
Sbjct: 439 YGLTETCAGSFVLSP-EQWHLYANTVGFPIPSIEFKLVDIPDLGYYTDSSPPRGEVWIRG 497

Query: 353 YNNMICYWNEPEKTRQTLDKDGWLKTGDKFTISKDGYGRIVGRIKDIIVR-GGENIAPKE 411
                 Y N PE  +    +DGW KTGD   I+K    R++ R K+I+    GE IA ++
Sbjct: 498 PAVCNGYLNRPEDNKAAFTEDGWFKTGDVGEIAKGNTLRLIDRKKNIVKSLNGEYIALEK 557

Query: 412 IEDLLNTHP 420
           IE    T P
Sbjct: 558 IEAQFFTSP 566


>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 676

 Score = 59.3 bits (137), Expect = 1e-09
 Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 12/184 (6%)

Query: 240 ITGTPTMFVDILSQIRAQGQEVLSELRVAVAAGAPCSPQLIRDIQTHLNAESVKSLYGLT 299
           + G+  +   + ++IR+ G      LR  ++ G+  SP   R +   L    +   YGLT
Sbjct: 381 LPGSCVLDTAVFNKIRSMGTG--GRLRYTLSGGSALSPDTKRFLSIVLCPMLIG--YGLT 436

Query: 300 ETTACIFQSNQGD-SIDVVAETVGYIQDHVEVKVVN-EQGEIVPFETP--GELVVRGYNN 355
           E +A     N    ++D   ++ G +    E+K+V+ E+G       P  GE+ +RG + 
Sbjct: 437 EISAAAMVQNPACFNLD---DSAGSLLPCTEMKLVDCEEGNYNSHGHPPRGEIWLRGPSL 493

Query: 356 MICYWNEPEKTRQTLDKDGWLKTGDKFTISKDGYGRIVGRIKDII-VRGGENIAPKEIED 414
              Y N  ++ +++   DGW +TGD   ++ +G  RI+ R K+++  + GE IA +++E 
Sbjct: 494 TRGYLNRDKENKESFTPDGWFRTGDVGELTPEGLLRIIDRKKNLVKTQNGEYIALEKLES 553

Query: 415 LLNT 418
              T
Sbjct: 554 RYRT 557



 Score = 29.1 bits (62), Expect = 1.5
 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 15/169 (8%)

Query: 5   AYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEM 64
           A  LR  GL KGD+  +++  S  +L++  A     +  V       ++ L   +++S +
Sbjct: 110 AGALRKLGLNKGDKFELYAPTSAFWLLTAEACLSQSMTIVTAYDTLGEEGLLHSLRESGV 169

Query: 65  KCLLIGDALPKREYYRTLEQLIPELKDGKPGLLKSREFPFLSSIIADGRNKLPGTISYKS 124
           + +     L        L+ L+  LK+     ++S E     +   +   K    I    
Sbjct: 170 RGMYTEGHL--------LKTLVNPLKE-----IESLEVIIYRNDAKEEDIKTIQEIRPNL 216

Query: 125 LTEDYKNRSEVSQYVKETKPSDGSI--IHFTSGTTGEPKAALDSHLGVV 171
               + +  ++S  V+   PS   I  I +TSG+TG PK  + SH  +V
Sbjct: 217 KLIKFADFEKMSPPVEPDPPSPEEICCIMYTSGSTGLPKGVILSHKNMV 265


>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1419

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 25/304 (8%)

Query: 4   MAYGLRNQGLQKGDRVGIWSHNSVSYLVSLVAAARAGLISVLINPAYEKKELSFCIKKSE 63
           +A+ L   G+++GD V ++++  V  +V+++   +AG    +I+PAY        +  ++
Sbjct: 325 LAHHLVKNGIERGDVVMVYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQIIYLSVAK 384

Query: 64  MKCLLI-GDA-LPKREYYRTLEQLIPELKDGKPGLLKSREFPFLSSIIADGRNKLPGTIS 121
            + L++  DA +        +E+ + ELK   P L  +++       ++ G + +     
Sbjct: 385 PRALVVLEDAGVLSPTVVEYVEKSL-ELKTYVPALKLAKDGSLTGGSVSKGADDI----- 438

Query: 122 YKSLTEDYKNRSEVSQYVKETKPSDGSIIHFTSGTTGEPKAALDSHLGVVNNTYFTGKRN 181
              L      +SE +  V    P     + FTSG+ G PK     H  +    YF     
Sbjct: 439 ---LQHVLHLKSEQTGVV--VGPDSTPTLSFTSGSEGIPKGVKGRHFSLA--YYFDWMAQ 491

Query: 182 TFHEGHHNICVQVP-IFH--ALGSIVTVLGGFRHGASLVLAAPIYDISANVKALFGEKCT 238
            F+    +    +  I H      I T L  F  GASL++     DI         +   
Sbjct: 492 EFNLSESDRFTMLSGIAHDPIQRDIFTPL--FL-GASLIVPT-AEDI--GTPGQLAQWAN 545

Query: 239 AITGTPTMFVDILSQ-IRAQGQEVLSELRVAVAAGAPCSPQLIRDIQTHLNAESVKSLYG 297
               T T     + Q + AQ  E +  L  A   G   + +    +Q   N  +V ++YG
Sbjct: 546 KYKVTVTHLTPAMGQLLAAQADEPIPSLHHAFFVGDILTKRDCLRLQVLANNVNVVNMYG 605

Query: 298 LTET 301
            TET
Sbjct: 606 TTET 609


>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 4924

 Score = 34.7 bits (76), Expect = 0.030
 Identities = 83/359 (23%), Positives = 143/359 (39%), Gaps = 43/359 (11%)

Query: 152 FTSGTTGEPKAALDSHLGVVNNTYFTG-KRNTFHEGHHNICVQVPIFHALGSIVTVLGGF 210
           +TSG+TG PK    SH    N+    G     F     +  +Q        S+  + G +
Sbjct: 366 YTSGSTGNPKGVAISHRAATNSIKSHGYLYPMFGLERGDAWLQFANVTFDVSVFEIFGNW 425

Query: 211 RHGASLVLAAPIYDISANVKAL-FGEKCTAITGTPTMFVDILSQIRAQGQEVLSELRVAV 269
            +G +LV  +   ++  N++ L +  K  A+  TPT+  +++S    + +E+ + +R+ +
Sbjct: 426 NNGLTLV-TSKRQNLIGNLEYLIYDYKIAALELTPTV-ANVIS--LDENKELFTSVRMLI 481

Query: 270 AAGAPCSPQLIRDIQTHLNAESVKSLYGLTETTACIFQSNQGDSIDVVAETVGYIQDHVE 329
             G     +L+ +       E + + YG TE  A     N   ++  V   VG       
Sbjct: 482 TIG-----ELLTNRIIDFWGERLVNAYGPTE-AAIHVTLNPSKALTTV-YLVGVPLQSAT 534

Query: 330 VKVV-----NEQGEIVPFETPGELVVRGYNNMICYWNEPEKTRQTLDKDGW-------LK 377
           + VV     + Q  ++     GE+ + G      Y N PE   +   +  +        +
Sbjct: 535 ICVVSLPTEDSQPHVLHEGFLGEVCIAGPQLSSGYINRPEINAKAFVEVQYNEQTLSIYR 594

Query: 378 TGDKFTISKDG---YGRIVGRIKDIIVRGGENIAPKEIEDLLNTHPDVEESQVVGVSDKR 434
           TGD   I       +GRI G ++ I +R G  I   EIE  L   P V+   +  + D  
Sbjct: 595 TGDLGRIINGKLYIFGRIAGDMQ-IKIR-GRRIEIGEIESKL--APSVDSLAIEKIGDNL 650

Query: 435 VGEELCAVVRLREGAALSLDDVTKHLTGEIARFKFPRILKVTQEFPKTASGKIQKYRLR 493
           V   +   ++LR           KH    +A +  P        FP+ ASGK  +  L+
Sbjct: 651 VAFYVGDEMKLR-----------KHAESHLASWMCPTKYVGLPGFPRLASGKTDRKALK 698



 Score = 32.7 bits (71), Expect = 0.12
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 128  DYKNRSEVSQYVKETKPSDGSIIHFTSGTTGEPKAALDSHLGVV 171
            +Y N  E + Y K+ + S+ + + +TSG+TG+PK    +H  VV
Sbjct: 2854 NYSNNIE-NPYTKDFEDSNLAYVLYTSGSTGKPKGCCLTHHNVV 2896


>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1517

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 1   ADSMAYGLRNQ-GLQKGDRVGIWSHN--SVSYLVSLVAAARAGLISVLINPAYEKKELSF 57
           A+ +A  +R++ GL + DRV +   +  ++ ++VSL     AG+++V IN   +  ELS 
Sbjct: 203 AEKVAQVIRDKSGLFRSDRVVLMYRDCEAIDFVVSLFGCFIAGVVAVPINRFDDYNELSS 262

Query: 58  CIKKSEMKCLLIGDA 72
            +  +  +  L  DA
Sbjct: 263 ILTTTSARLALTTDA 277


>SPAC2F7.13c |||tryptophan-tRNA ligase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 395

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 16/38 (42%), Positives = 20/38 (52%)

Query: 68  LIGDALPKREYYRTLEQLIPELKDGKPGLLKSREFPFL 105
           LI  A+ +  Y+R    +   LK  KP LL SR FP L
Sbjct: 232 LIPCAIDQDPYFRLTRDVSGRLKFKKPALLHSRFFPAL 269


>SPAC869.09 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 116

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 8/66 (12%)

Query: 120 ISYKSLTEDYKNRSEVSQYVKETKPSDGSIIHFTSGTTGEPKAALDSHLGVVNNTYFTGK 179
           +S   ++E+ K R+   +Y+KE     GS  H+T+GTT   KA  D   G +    F G 
Sbjct: 15  LSNPHVSEEAKERAR--KYLKE----HGSESHYTTGTTRGQKADADD-AGELREEGF-GT 66

Query: 180 RNTFHE 185
           +N F +
Sbjct: 67  KNQFED 72


>SPCC338.12 |||protease inhibitor |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 77

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 380 DKFTISKDGYGRIVGRIKDIIVRGGENIAPKEIEDLLNTHPDVE 423
           DK     +  G  +G   D + +G     P+   D L+ HP+++
Sbjct: 20  DKIKSDLEASGAKIGHTYDTVFKGFSVSLPENAVDALSAHPEIQ 63


>SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 498

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 44/182 (24%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 101 EFPFLSSIIADGRN--KLPGTISYKSLTEDYKNRSEVSQYVKETKPSDGSIIHFTSGTTG 158
           EFP  + I     N   +P T +Y  L      R E  +++ E   +    +  TS    
Sbjct: 8   EFPTRTEIPNQASNGDAVPNTDAYMGLCNSLTYRFEGWRHLVENLIAFFKQLESTSKNNA 67

Query: 159 EPKAALDSHLGVVNNTYFTGKRNTFHEGHHNICVQVPIFHALGSIVTVLGGFRHGASLVL 218
           +    L     V+ + Y     N F E  H I     IF AL      +       S+ L
Sbjct: 68  KEYMKLSK---VIVHPYKDA--NVFEE--HGI---QDIFAALRDQTAAIASDSEQISIQL 117

Query: 219 AAPIYDISANVKALFGEKCTAITGTPTMFVDILSQIRAQGQEVLSELRVAVAAGAPCSPQ 278
              I +I   ++    E C  I    T  V ++ + RA+ Q+ LS L  A+      SP 
Sbjct: 118 PGTIINILELLREDLREHCKKIAAEGTKGVKVVEKQRAETQKYLSLLDRALLPWRASSPP 177

Query: 279 LI 280
            +
Sbjct: 178 TV 179


>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
           Cct6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 535

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 66  CLLIGDALPKREYYRTLEQLIPELKDGKPGLLKSREFPFLSSIIAD 111
           CLL+G+ L + E Y   E L P L      L K+    FL S   D
Sbjct: 94  CLLVGELLKQAELY-IREGLHPSLISDGFNLAKNEALTFLDSFKTD 138


>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1428

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 12/63 (19%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 12  GLQKGDRVGIWSHNSVS--YLVSLVAAARAGLISVLINPAYEKKELSFCIKKSEMKCLLI 69
           GL+ G RV ++   S +  Y++S+      G++ + ++P+   + L   + + +++    
Sbjct: 147 GLKPGTRVILYYRKSEASEYIISIFGCLLLGIVVIPLSPSSSSESLKLVVNEEKVRVAFT 206

Query: 70  GDA 72
            +A
Sbjct: 207 TEA 209


>SPAC869.05c |||sulfate transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 840

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 395 RIKDIIVRGGENIAPKEIEDLLNTHPDVEESQVVGVSDKR-----VGEELCAVVRLREGA 449
           RIKD+  RG +NI  K+I+   N     ++ +   + D R     +  +  AV  L   A
Sbjct: 612 RIKDLTRRGIDNIYVKDIDRPWNVPRQRKKKENSEIEDLRPLLQAIIFDFSAVNNLDTTA 671

Query: 450 ALSLDDVTKHL---TGEIARFKFPRI 472
             SL D+ K L     E   F F  I
Sbjct: 672 VQSLIDIRKELEIYANETVEFHFTNI 697


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.317    0.136    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,249,570
Number of Sequences: 5004
Number of extensions: 96006
Number of successful extensions: 262
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 242
Number of HSP's gapped (non-prelim): 22
length of query: 501
length of database: 2,362,478
effective HSP length: 76
effective length of query: 425
effective length of database: 1,982,174
effective search space: 842423950
effective search space used: 842423950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)

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