GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005204-TA|BGIBMGA005204-PA|IPR009890|Etoposide-induced
2.4
         (249 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002390-1|AAH02390.1|  340|Homo sapiens etoposide induced 2.4 m...   243   5e-64
AF010313-1|AAC39531.2|  359|Homo sapiens Pig8 protein.                241   1e-63
AB209820-1|BAD93057.1|  185|Homo sapiens Etoposide-induced prote...   127   3e-29
S81591-1|AAB36180.1|  698|Homo sapiens Na+/H+ exchanger protein.       30   8.8  

>BC002390-1|AAH02390.1|  340|Homo sapiens etoposide induced 2.4 mRNA
           protein.
          Length = 340

 Score =  243 bits (594), Expect = 5e-64
 Identities = 118/251 (47%), Positives = 165/251 (65%), Gaps = 5/251 (1%)

Query: 2   LIKGFVDSLRGVTVLLYLDKEIN----ERALSRSPQTDADSKHKQKQPKVRQESKVLTRV 57
           L +G  DS+ G+  +  LD  I     E+   R+    A  + +  + K   E ++++R+
Sbjct: 12  LARGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQSIERKQESEPRIVSRI 71

Query: 58  LQSCILNGFIFLLSILVFEYVLLPAIKYLVMVIFGHDPGVAHNVWAWMQPFLLMTFRMIW 117
            Q C  NG +F  S+L+F  V +P ++ +   I G DP +  +VW+W++ FL   F  +W
Sbjct: 72  FQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARIIG-DPSLHGDVWSWLEFFLTSIFSALW 130

Query: 118 VLPLFLLSKLVNSLWFQDIADSAYRHRRGRPQFMSSVSKIIADSLFSLLVQALFLVQSML 177
           VLPLF+LSK+VN++WFQDIAD A+     +P    SVSKIIAD LF+LL+QALFL+Q M 
Sbjct: 131 VLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMF 190

Query: 178 VSMLPLTYVGELLCLIHMCLLYSLYSFEYKWFNMGWELHKRLTFIESNWPYFVGFGLPLA 237
           VS+ P+  VG+L+ L+HM LLYSLY FEY+WFN G E+H+RL+ IE NWPY+ GFGLPLA
Sbjct: 191 VSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLA 250

Query: 238 VLTQIPQSYII 248
            LT +  SYII
Sbjct: 251 FLTAMQSSYII 261


>AF010313-1|AAC39531.2|  359|Homo sapiens Pig8 protein.
          Length = 359

 Score =  241 bits (591), Expect = 1e-63
 Identities = 118/251 (47%), Positives = 164/251 (65%), Gaps = 5/251 (1%)

Query: 2   LIKGFVDSLRGVTVLLYLDKEIN----ERALSRSPQTDADSKHKQKQPKVRQESKVLTRV 57
           L +G  DS+ G+  +  LD  I     E+   R+    A  + +  + K   E ++++R+
Sbjct: 31  LARGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRPQSIERKQESEPRIVSRI 90

Query: 58  LQSCILNGFIFLLSILVFEYVLLPAIKYLVMVIFGHDPGVAHNVWAWMQPFLLMTFRMIW 117
            Q C  NG +F  S+L+F  V +P ++ +   I G DP +  +VW+W+  FL   F  +W
Sbjct: 91  FQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARIIG-DPSLHGDVWSWLGFFLTSIFSAVW 149

Query: 118 VLPLFLLSKLVNSLWFQDIADSAYRHRRGRPQFMSSVSKIIADSLFSLLVQALFLVQSML 177
           VLPLF+LSK+VN++WFQDIAD A+     +P    SVSKIIAD LF+LL+QALFL+Q M 
Sbjct: 150 VLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMF 209

Query: 178 VSMLPLTYVGELLCLIHMCLLYSLYSFEYKWFNMGWELHKRLTFIESNWPYFVGFGLPLA 237
           VS+ P+  VG+L+ L+HM LLYSLY FEY+WFN G E+H+RL+ IE NWPY+ GFGLPLA
Sbjct: 210 VSLFPIHLVGQLVSLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLA 269

Query: 238 VLTQIPQSYII 248
            LT +  SYII
Sbjct: 270 FLTAMQSSYII 280


>AB209820-1|BAD93057.1|  185|Homo sapiens Etoposide-induced protein
           2.4 variant protein.
          Length = 185

 Score =  127 bits (307), Expect = 3e-29
 Identities = 66/170 (38%), Positives = 101/170 (59%), Gaps = 5/170 (2%)

Query: 2   LIKGFVDSLRGVTVLLYLDKEIN----ERALSRSPQTDADSKHKQKQPKVRQESKVLTRV 57
           L +G  DS+ G+  +  LD  I     E+   R+    A  + +  + K   E ++++R+
Sbjct: 17  LARGIKDSIWGICTISKLDARIQQKREEQRRRRASSVLAQRRAQSIERKQESEPRIVSRI 76

Query: 58  LQSCILNGFIFLLSILVFEYVLLPAIKYLVMVIFGHDPGVAHNVWAWMQPFLLMTFRMIW 117
            Q C  NG +F  S+L+F  V +P ++ +   I G DP +  +VW+W++ FL   F  +W
Sbjct: 77  FQCCAWNGGVFWFSLLLFYRVFIPVLQSVTARIIG-DPSLHGDVWSWLEFFLTSIFSALW 135

Query: 118 VLPLFLLSKLVNSLWFQDIADSAYRHRRGRPQFMSSVSKIIADSLFSLLV 167
           VLPLF+LSK+VN++WFQDIAD A+     +P    SVSKIIAD LF+LL+
Sbjct: 136 VLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLL 185


>S81591-1|AAB36180.1|  698|Homo sapiens Na+/H+ exchanger protein.
          Length = 698

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 71  SILVFEYVLLPAIKYLVMVIFGHDPGVAHNVWAWMQPFLLMTFRMIW-VLPLFLLSKLVN 129
           +I  F  +L    + L+ +  G      ++ W W      + F +IW  L +F+L++++N
Sbjct: 243 TIKYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLIWRALGVFVLTQVIN 302

Query: 130 SLWFQDI 136
             WF+ I
Sbjct: 303 --WFRTI 307


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.330    0.142    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,594,287
Number of Sequences: 224733
Number of extensions: 1512495
Number of successful extensions: 6391
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6385
Number of HSP's gapped (non-prelim): 4
length of query: 249
length of database: 73,234,838
effective HSP length: 88
effective length of query: 161
effective length of database: 53,458,334
effective search space: 8606791774
effective search space used: 8606791774
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 64 (29.9 bits)