Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005202-TA|BGIBMGA005202-PA|IPR003439|ABC transporter
related, IPR013525|ABC-2 type transporter
(620 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 121 3e-28
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 89 1e-18
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 62 3e-10
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 52 2e-07
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 52 2e-07
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 52 2e-07
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 52 3e-07
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 49 2e-06
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 41 4e-04
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 40 8e-04
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 40 8e-04
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 40 8e-04
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 40 0.001
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 39 0.002
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 36 0.013
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 36 0.013
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 35 0.029
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 33 0.12
SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyce... 31 0.63
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 30 0.83
SPAC664.08c |||traub transciption factor family protein |Schizos... 30 0.83
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 30 1.1
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 29 1.4
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 2.5
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 29 2.5
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 28 3.3
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 28 3.3
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 4.4
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 4.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 7.7
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 121 bits (291), Expect = 3e-28
Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 12/206 (5%)
Query: 8 TSGMEGSITVNGMERNLSSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSSTTRDEK 67
T + G + VNG + S+F++ + Y+ Q + G TV EA+ + +L+ P+S EK
Sbjct: 937 TGVVTGDMLVNGRGLD-STFQRRTGYVQQQDVHIGESTVREALRFSAALRQPASVPLSEK 995
Query: 68 EMLTETILHTLSLMEHRK----TMTSNLSGGQKKRLSIALELVNNPPIMFF-DEPTSGLD 122
E+++ L + + + T S L+ Q+KR +I +EL P ++ F DEPTSGLD
Sbjct: 996 YEYVESVIKLLEMESYAEAIIGTPGSGLNVEQRKRATIGVELAAKPALLLFLDEPTSGLD 1055
Query: 123 SSSCFQCISLLKTLASEGRTIICTIHQPSARLFEKFDHLYTL-ADGQCVYQGSTGR---- 177
S S + + L+ LA G+ I+CTIHQPSA LF++FD L L G+ VY G G
Sbjct: 1056 SQSAWSIVCFLRKLADAGQAILCTIHQPSAVLFDQFDRLLLLQKGGKTVYFGDIGEHSKT 1115
Query: 178 LVDWLGSL-KLQCPSYHNPASFIIEV 202
L+++ S + CP NPA +I++V
Sbjct: 1116 LLNYFESHGAVHCPDDGNPAEYILDV 1141
Score = 70.9 bits (166), Expect = 5e-13
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 11 MEGSITVNGMER-NLSSFRKLSCYIMQDNQLH-GNLTVEEAMGVATSLKLPSST----TR 64
+EG+ +G+++ ++ F +N +H +LT E + A + P++ TR
Sbjct: 217 VEGTTHYDGIDKADMKKFFPGDLLYSGENDVHFPSLTTAETLDFAAKCRTPNNRPCNLTR 276
Query: 65 DEKEMLTETILHTLSLMEHR-KTMTSN-----LSGGQKKRLSIALELVNNPPIMFFDEPT 118
E ++ T + H T N +SGG++KR++I+ P I +D T
Sbjct: 277 QEYVSRERHLIATAFGLTHTFNTKVGNDFVRGVSGGERKRVTISEGFATRPTIACWDNST 336
Query: 119 SGLDSSSCFQCISLLKTLASEGR-TIICTIHQPSARLFEKFDHLYTLADGQCVYQGSTGR 177
GLDSS+ F+ +++L+T A+E + T T +Q S ++++ FD + L G+ +Y G +
Sbjct: 337 RGLDSSTAFEFVNVLRTCANELKMTSFVTAYQASEKIYKLFDRICVLYAGRQIYYGPADK 396
Query: 178 LVDWLGSLKLQCPSYHNPASFIIEVS 203
+ + C F+ +S
Sbjct: 397 AKQYFLDMGFDCHPRETTPDFLTAIS 422
Score = 56.0 bits (129), Expect = 1e-08
Identities = 40/200 (20%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 372 FAHILVGFLIGALYYDIGDDGSKVLSXXXXXXXXXXXXXYTSMTITILSFPLEMPVLVKE 431
FA + +IG+++YD+ + V S S++ I + + P++ K
Sbjct: 546 FAFLFQSLIIGSIFYDMKLNTVDVFSRGGVLFFSILFCALQSLS-EIANMFSQRPIIAKH 604
Query: 432 HFNRWYSLRSYYLAITVSDIPFQAIFCIIYVVIVYLLTSQPPV----WFRFA-MFLSSCL 486
+ Y + ++ + D+PF+ I ++ +++Y LT+ W F +F+ +
Sbjct: 605 RASALYHPAADVISSLIVDLPFRFINISVFSIVLYFLTNLKRTAGGFWTYFLFLFIGATC 664
Query: 487 LISFVAQSVGLVVGAAMNVQNGVFLAPVMSVPFLLFSGFFVSFNAIPVYLRWITYLSYIR 546
+ +F G++ NV++ L + + +++G+ + + + RWI YL ++
Sbjct: 665 MSAFFRSLAGIMP----NVESASALGGIGVLAIAIYTGYAIPNIDVGWWFRWIAYLDPLQ 720
Query: 547 YGFEGTALATYSFNRTKLQC 566
+GFE +L F + +C
Sbjct: 721 FGFE--SLMINEFKARQFEC 738
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 89.4 bits (212), Expect = 1e-18
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 11 MEGSITVNGMERNLSSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSSTTRDEKEML 70
+EG IT++G+ +N + RK Y+ ++ TV E + + +L+ + E+
Sbjct: 816 VEGEITLSGL-KNPKNLRKRIGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAY 874
Query: 71 TETILHTLSLMEHRKTMTSNLSGG----QKKRLSIALELVNNP-PIMFFDEPTSGLDSSS 125
E ++ L L E + ++ G K+ LSIA+EL P I+ DEP +GLDS S
Sbjct: 875 VEYVIDFLGLGEVADFIVGDMGKGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQS 934
Query: 126 CFQCISLLKTLASEGRTIICTIHQPSARLFEKFDHLYTL-ADGQCVYQGSTGR 177
+ + +L+ LA G +I+C++ QPS+R+ E FD + L +G VY + GR
Sbjct: 935 AWMLVCILQKLARSGLSILCSVSQPSSRILELFDMMLILDLNGNTVYYDTMGR 987
Score = 53.6 bits (123), Expect = 8e-08
Identities = 37/201 (18%), Positives = 84/201 (41%), Gaps = 4/201 (1%)
Query: 371 LFAHILVGFLIGALYYDIGDDGSKVLSXXXXXXXXXXXXXYTSMTITILSFPLEMPVLVK 430
+F ++ ++G+L+Y++ ++ S++ S +M+ + F + L K
Sbjct: 436 VFTYVFQALMLGSLFYNLRNESSELYSRGSVLSNAIVFTAIQTMSEVDIIFLKKS--LFK 493
Query: 431 EH-FNRWYSLRSYYLAITVSDIPFQAIFCIIYVVIVYLLTSQPPVWFRFAMFLSSCLLIS 489
EH Y + + ++ + P + + +Y +IVY L+ F +F ++I+
Sbjct: 494 EHRVQSLYHPSAALMGSSLVEFPMRIVVVTMYDIIVYFLSDLKRNARSFFIFYLFTIVIT 553
Query: 490 FVAQSVGLVVGA-AMNVQNGVFLAPVMSVPFLLFSGFFVSFNAIPVYLRWITYLSYIRYG 548
F +V + + + + + ++ ++F G + I + RWI Y + + YG
Sbjct: 554 FCMSAVFRFIALLSTTAEIAALIGGIGALVLIIFCGAVMPVQYIGWWFRWIAYANPVNYG 613
Query: 549 FEGTALATYSFNRTKLQCHAP 569
+E L + AP
Sbjct: 614 YESIMLNEFDGREIPCSLMAP 634
Score = 52.8 bits (121), Expect = 1e-07
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 8/204 (3%)
Query: 11 MEGSITVNGMERNL--SSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSSTTRDEKE 68
+ GS+ +G++ + S F+ Y + + +TV + S +LP+S +
Sbjct: 132 LNGSLHYDGLDYKIAHSQFKADLSYCGEGHSKVATITVRRLLEFVCSCRLPASKYDHPRS 191
Query: 69 ----MLTETILHTLSLME-HRKTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDS 123
+ E I L + + + + G + ++ +A + P I +D DS
Sbjct: 192 HYIRRICEIIRDAFDLGDFYNHRILRVFNSGDQIKVDVAQTMCARPLIQCWDNNMRDFDS 251
Query: 124 SSCFQCISLLKTLASE-GRTIICTIHQPSARLFEKFDHLYTLADGQCVYQGSTGRLVDWL 182
S +S +K L+ + G T++ + Q S R+F FD + + +G+ ++ G T RL +
Sbjct: 252 ISVIDILSRIKVLSHKLGTTLVAIVSQASDRIFHMFDMVTLMYEGEQIFYGPTSRLKPYF 311
Query: 183 GSLKLQCPSYHNPASFIIEVSCGE 206
L + F+ ++ E
Sbjct: 312 LDLGFIPAKHSTTVEFVTSLTYPE 335
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 61.7 bits (143), Expect = 3e-10
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 17 VNGMERNLSSFRKLSCYIMQDNQLH-GNLTVEEAMGVATSLKLPSSTTRDEKEMLTETIL 75
VN + N++ +RK + Q+ L+ G + +G + + +K + E IL
Sbjct: 1183 VNVRDYNINDYRKQIALVSQEPTLYQGTVRENIVLGASKDVSEEEMIEACKKANIHEFIL 1242
Query: 76 HTLSLMEHRKTMT----SNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCIS 131
L T+ S+LSGGQK+R++IA L+ NP I+ DE TS LDS S + +
Sbjct: 1243 ---GLPNGYNTLCGQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHS-EKVVQ 1298
Query: 132 LLKTLASEGRTIICTIHQPSARLFEKFDHLYTLADGQCVYQGSTGRLVDWLG 183
AS+GRT + H+ S+ + D ++ G G+ LV G
Sbjct: 1299 EALNAASQGRTTVAIAHRLSS--IQDADCIFVFDGGVIAEAGTHAELVKQRG 1348
Score = 56.0 bits (129), Expect = 1e-08
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 91 LSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIHQP 150
+SGGQK+R++IA ++++P I+ DE TS LDS S L AS RT I H+
Sbjct: 568 MSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALDN-ASRSRTTIVIAHRL 626
Query: 151 SARLFEKFDHLYTLADGQCVYQGSTGRLVDWLGS 184
S D++ + G+ V QGS L+D G+
Sbjct: 627 ST--IRNADNIVVVNAGKIVEQGSHNELLDLNGA 658
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 88 TSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTI 147
+ N SGGQ +RL+ A L+ NP ++ DE TS LDS S + L KT+ + T++
Sbjct: 1233 SKNFSGGQIQRLAFARALLRNPRLLILDECTSALDSKS---SLLLEKTIQNLSCTVLIIT 1289
Query: 148 HQPSARLFEKFDHLYTLADGQCVYQGSTGRLVD 180
HQPS L + D + + G GS L++
Sbjct: 1290 HQPS--LMKLADRIIVMDSGIVKESGSFDELMN 1320
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 89 SNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIH 148
++LSGGQ++R+++A L+ + I+ DEPTS LD + + ++ +G+T + H
Sbjct: 569 ASLSGGQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAIRA-HRKGKTTLVITH 627
Query: 149 QPS 151
S
Sbjct: 628 DMS 630
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 52.0 bits (119), Expect = 2e-07
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 13 GSITVNGME-RN--LSSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSSTTRDEKEM 69
GSIT++ + RN LSS R + QD+ L + + S +
Sbjct: 639 GSITIDDQDIRNVTLSSLRSSIGVVPQDSTLFNDTILYNIKYAKPSATNEEIYAAAKAAQ 698
Query: 70 LTETILHTLSLMEHRKTMTS-NLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQ 128
+ + IL R LSGG+K+R+++A ++ +P I+ DE TS LD+++ Q
Sbjct: 699 IHDRILQFPDGYNSRVGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTERQ 758
Query: 129 CISLLKTLASEGRTIICTIHQPSARLFEKFDHLYTLADGQCVYQGSTGRLV 179
+ L LAS GRT I H+ S D + +++G+ V G+ L+
Sbjct: 759 IQAALNRLAS-GRTAIVIAHRLST--ITNADLILCISNGRIVETGTHEELI 806
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 52.0 bits (119), Expect = 2e-07
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 91 LSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIHQP 150
LSGGQK+R++IA L+ NP + DE TS LD + +++L TI
Sbjct: 620 LSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAHK 679
Query: 151 SARLFEKFDHLYTLADGQCVYQGSTGRL 178
A + + D + + DG+ + QGS RL
Sbjct: 680 LATI-RRADQIIVVGDGKVLEQGSFERL 706
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 51.6 bits (118), Expect = 3e-07
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 91 LSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTL-ASEGRTIICTIHQ 149
+SGG+K+RL+++ L+ NP I+FFDE TS LD+++ + + L +T + H+
Sbjct: 580 ISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLIKGSHKTSVFIAHR 639
Query: 150 PSARLFEKFDHLYTLADGQCVYQGSTGRLV 179
R + D ++ L G+ V QGS +L+
Sbjct: 640 --LRTIKDCDIIFVLEKGRVVEQGSHEQLM 667
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 90 NLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIHQ 149
NLS GQ +R +A +LV P ++ DEP +GLD +S SLL +++ I +
Sbjct: 148 NLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNHCSPKIVLSLR 207
Query: 150 PSARLFEKFDHLYTLADGQCVYQG 173
P ++ + H+ L + + YQG
Sbjct: 208 PQDKIPDFITHVLELKNKKITYQG 231
Score = 31.5 bits (68), Expect = 0.36
Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 53 ATSLKLPSSTTRDEKEMLTETILHTLSLMEHRKTMTSNLSGGQKKRLSIALELVNNPPIM 112
+T+ +P T + + +IL L + + S++S G ++ + +V P ++
Sbjct: 370 STTFTIPKLT--ETRLAAISSILEEFELKDIKDKPLSSISVGMQRFILFCRAIVKQPRLV 427
Query: 113 FFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIH 148
DEP G+D+ + L S + ++ H
Sbjct: 428 VLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMVIISH 463
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 88 TSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTI 147
T+ LSGG + R+++A L P +M DEPT+ LD + L T EG T++ T
Sbjct: 418 TNELSGGWRMRIALARILFIKPTLMMLDEPTNHLDLEAVAWLEEYL-THEMEGHTLLITC 476
Query: 148 H 148
H
Sbjct: 477 H 477
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 91 LSGGQKKRLSIALELVNNPPIMFFDEPTSGLD 122
LS GQ++R+ A + P I+ DEPT+ LD
Sbjct: 713 LSDGQRRRVLFAFLGMTQPHILLLDEPTNALD 744
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 40.3 bits (90), Expect = 8e-04
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 89 SNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIH 148
++LSGGQK R+S+A + + I D+ S +D I L RT +
Sbjct: 702 ASLSGGQKSRISLARAIYSQADIYLLDDVLSSVDQHVSRDLIKNLFGPEGFLRTHCVVLT 761
Query: 149 QPSARLFEKFDHLYTLADGQCVYQGSTGRL-VDWLGSLKLQCPSYHN 194
S + ++ D +Y L++G+ V +G+ L V LK Q +++
Sbjct: 762 TNSLNVLKEADSIYILSNGKIVEKGNYEHLFVSTNSELKQQLSEFND 808
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 89 SNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIH 148
+N S GQ++ + +A L+ + I+ DE T+ + + + ++ + RTI+ H
Sbjct: 1361 ANFSSGQRQLICLARVLLTSTRILLLDEATASVHAETDAIVQQTIRKRFKD-RTILTVAH 1419
Query: 149 QPSARLFEKFDHLYTLADGQCVYQGSTGRLVD 180
+ + + D + L G+ V +T +L++
Sbjct: 1420 RINTVM--DSDRILVLDHGKVVEFDATKKLLE 1449
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 40.3 bits (90), Expect = 8e-04
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 89 SNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCIS--LLKTLASEGRTIICT 146
S+LSGGQK+R+S+A L +N + FD+ S LD S+ + L TL + +TII
Sbjct: 705 SSLSGGQKQRVSLARALYSNAEVYIFDDIFSALDVSTSRKIYESCFLSTLL-QHKTIILF 763
Query: 147 IHQPSARLFEKFDHLYTLADGQCVYQGSTGRLV 179
H S L +A+ V + ST +LV
Sbjct: 764 THNVSLCL--------PIAENVIVLKNSTAQLV 788
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 90 NLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIHQ 149
N S GQ++ L++A LV I+ DE T+ +D ++ + +L+ A + T++C H+
Sbjct: 1324 NFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLRA-AFKHATVLCIAHR 1382
Query: 150 PSARLFEKFDHLYTLADGQCVYQGSTGRLVDWLGSLKLQCPSYH 193
+ +D + L G+ V GS L + C H
Sbjct: 1383 --IKTIVDYDKVLVLDSGKTVEFGSPKSLYTQRRAFWKMCKESH 1424
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 89 SNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLD 122
S+LSGGQK ++ IA L NNP ++ DEPT+ LD
Sbjct: 909 SSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 75 LHTLSLM-EHRKTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLL 133
LH++ E ++ ++LSGG K +L +A ++ I+ DEPT+ LD ++ I+ L
Sbjct: 546 LHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHLDVAN----IAWL 601
Query: 134 KTLASEGRTIICTI 147
+ + + I C I
Sbjct: 602 EAYLTSQKNITCLI 615
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 39.9 bits (89), Expect = 0.001
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 8 TSGMEGSITVNGMER---NLSSFRKLSCYIMQD-----NQLHGNLTVEEAMG---VATSL 56
T + G I +NG E NL++ R+ +I QD + NL + + + +L
Sbjct: 1263 THRISGEIYINGRETQSVNLNALRQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEAL 1322
Query: 57 KLPSSTTRDEKEMLTETILHTLSLMEHRKTMTSNLSGGQKKRLSIALELVNNPPIMFFDE 116
K +++ + +H ++L H + SN S GQK+ L++A +V I+ DE
Sbjct: 1323 KTSGASSMIMAHTDDQKPIH-ITLDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDE 1381
Query: 117 PTSGLDSSSCFQCISLLKTLASEGRTIICTIHQPSARLFEKFDHLYTLADGQCVYQGSTG 176
T+ +D + + L+ + T++C H+ + +D + L G V G
Sbjct: 1382 CTASVDDAMDQKIQKTLREAFGDA-TMLCIAHR--LKTIVDYDKVMVLDKGVLVEYGPPA 1438
Query: 177 RLVDWLGSLKLQC 189
L G + C
Sbjct: 1439 VLYHNNGHFRRMC 1451
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 91 LSGGQKKRLSIALELVNNPPIMFFDEPTSGLD-SSSCFQCISLLKTLASEGRTIICTIH 148
LSGGQK+R+++A + + I+ D+ S LD +S + ++ E RT+I H
Sbjct: 740 LSGGQKQRIALARAVYSPTSIVLMDDVFSALDIHTSNWIYKHCFQSSLMENRTVILVTH 798
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 91 LSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSS 125
LSGGQK R++ A + NP I+ DEPT+ LD S
Sbjct: 637 LSGGQKSRVAFACLGLQNPHILILDEPTNHLDMES 671
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 60 SSTTRDEKEMLTETILHTLSLMEHRKT-MTSNLSGGQKKRLSIALELVNNPPIMFFDEPT 118
S D E TIL L + ++ T SGG + RLS+A L P ++ DEP+
Sbjct: 323 SEMDSDRAESRAATILAGLGFTQEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEPS 382
Query: 119 SGLDSSS 125
+ LD S
Sbjct: 383 NMLDVPS 389
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 36.3 bits (80), Expect = 0.013
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 74 ILHTLSLMEHRKTM-TSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISL 132
ILH L + T ++SGG + R++++ L P ++ DEPT+ LD + + L
Sbjct: 203 ILHGLGFTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLDLEA---VVWL 259
Query: 133 LKTLASEGRTIICTIH 148
LA + ++ T H
Sbjct: 260 ENYLAKYDKILVVTSH 275
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 83 HRKTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSS 125
H+ + LS G K R+ A + P I+ DEPT+ LD +S
Sbjct: 505 HQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLDITS 547
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 90 NLSGGQKKRLSIALELVNNPPIMFFDEPTSGLD 122
+LSGG K +L++ + NP I+ DEPT+ LD
Sbjct: 548 SLSGGWKMKLALTRAMFKNPDILLLDEPTNHLD 580
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 91 LSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIH 148
LSGGQK +L +A P ++ DEPT+ LD S +L K L + G ++ H
Sbjct: 904 LSGGQKVKLVLAACTWLRPHVIVLDEPTNYLDRDSLG---ALSKGLKNFGGGVVLVTH 958
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 72 ETILHTLSLMEHRKTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCIS 131
E ++ L +LSGG+ +R +IA + FDEP+S LD +
Sbjct: 201 EEVMDHTDLQNLLNREVGHLSGGELQRFAIAAVATQKADVYMFDEPSSYLDIKQRLKAGR 260
Query: 132 LLKTLASEGRTIICTIHQPS 151
++++L + +I H S
Sbjct: 261 VIRSLLATTNYVIVVEHDLS 280
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 90 NLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDS 123
NLSGG+ +R++I L L + DEP++ LDS
Sbjct: 455 NLSGGELQRVAICLALGMPADVYLIDEPSAYLDS 488
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 90 NLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEG--RTIICTI 147
+LSGGQK R+S+A + + I D+ S +D + L L S+G R+ +
Sbjct: 705 SLSGGQKARISLARAVYSRSDIYLLDDILSAVDQHVNRDLVRNL--LGSKGLLRSRCVIL 762
Query: 148 HQPSARLFEKFDHLYTLADGQCVYQGSTGRL 178
S + ++ +Y L +G+ + GS +L
Sbjct: 763 STNSLTVLKEASMIYMLRNGKIIESGSFTQL 793
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 89 SNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDSSSCFQCISLLKTLASEGRTIICTIH 148
+NLS GQ++ + + L+ ++ DE T+ +D + ++ ++ RTI+ H
Sbjct: 1359 ANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRERFND-RTILTIAH 1417
Query: 149 QPSARLFEKFDHLYTLADGQCVYQGSTGRLVDWLGSL 185
+ + + + + L G+ V ST +L++ SL
Sbjct: 1418 RINTVM--DSNRILVLDHGKVVEFDSTKKLLENKASL 1452
>SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 554
Score = 30.7 bits (66), Expect = 0.63
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 445 AITVSDIPFQAIFCII---YVVIVYLLTSQPPVWFRFAMFLS-SCLLISFVAQSVGLVVG 500
+++ SD+ F+A+ + +++ LL PP WFR+ +S + +L+ FV + L +
Sbjct: 166 SVSSSDVKFRAVQWAVGEAILLVCVLLNFIPPKWFRYIFRVSVAVILLDFVLNMIWLPIA 225
Query: 501 AA 502
+
Sbjct: 226 VS 227
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 30.3 bits (65), Expect = 0.83
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 169 CVYQGSTGRLVDWLGSLKL---QCPSYHNPASFIIEVSCGEYGNNTGKLVRAIDNGNNDI 225
CV QG T + G K Q S ++ + I+ V CGE GN +++ DI
Sbjct: 248 CV-QGGTTAIPGAFGCGKTVISQSLSKYSNSDLIVYVGCGERGNEMAEVLMDFPELTIDI 306
Query: 226 RNGMPFP--DQTPDYNNKKDMEVSLRAGSNWDKNDLSQVQEKFKDNNSN 272
NG P P +T N +M V+ R S + L+ E ++D N
Sbjct: 307 -NGKPEPIMKRTTLVANTSNMPVAAREASIYTGITLA---EYYRDQGKN 351
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 30.3 bits (65), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Query: 237 DYNNKKDMEVSLRAGSNWDKNDLSQVQEKFKDNNSNGANGHGNLQNGILQYATSEVSKGE 296
D+ N E S + N D + S + EK D NG L + I A ++ KG
Sbjct: 109 DHENFSSSEASSISEENEDDDQSSAIPEKDMDRLKKIINGEKKLSDQIRTSALEDMKKGL 168
Query: 297 PLSLQM 302
L QM
Sbjct: 169 ALKEQM 174
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 233 DQTPDYNNKKDMEVSLRAGSNWDKNDLSQVQEKFKDNNSNGANGHGNLQNGILQYATSE- 291
D + D +++D E+ R S+W+ +++ K KD G LQN + E
Sbjct: 127 DYSKDSEDEQDYELRPRVSSSWNNESYNRLPIKTKD---------GLLQNVVADVNNGEE 177
Query: 292 -VSKGE-PLSLQMDTDKQDNAAAALLGTEGSPE 322
+S+ E SL++D+D +D +L + +PE
Sbjct: 178 FLSESESEASLEIDSDIKDEKQKSLEEQKIAPE 210
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 232 PDQTPDYNNKKD---MEVSLRAGSNWDKNDLSQVQEKFKDNNSNGANGHGNLQNGILQY 287
P PD N D + V+++ GS + + LSQ+ + N G N HG+ ++ Y
Sbjct: 58 PYGPPDGGNGGDGGSVYVAVKPGSFNNLSHLSQIHKASNGTNGKGGNRHGSCGKSVILY 116
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 65 DEKEMLTETILHTLSLMEHRKTMTSNLSGGQKKRLSIALEL-VNN---PPIMFFDEPTSG 120
D + +E +L ++ + SNLSGG+K S+AL ++N P+ DE +
Sbjct: 1204 DSLDPFSEGVLFSVMPPKKSWKNISNLSGGEKTLSSLALVFALHNYKPTPLYVMDEIDAA 1263
Query: 121 LDSSSCFQCISLLKTLASEGRTIICTIHQPSARLFEKFDHLYTLAD 166
LD + + +K + I+ ++ L + +Y A+
Sbjct: 1264 LDFKNVSIVANYIKERTKNAQFIVISLRSNMFELSSRLVGIYKTAN 1309
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 504 NVQNGVFLAPVMSVPFLLFSGFFVSFNAIPVYLRWITYLSYIRYGFEGTALATYSFNRTK 563
N V L + VP L + G + S N +P+ + + Y + YSFN TK
Sbjct: 409 NTFGSVVLIFWIVVPILYYKGVWFS-NYLPMLSSSTFDHTGVSYNSSRVLNSDYSFNHTK 467
Query: 564 LQCHAP-YCHFKYPQTT 579
+ ++P Y Y +T
Sbjct: 468 YESYSPLYMPMSYSMST 484
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 28.3 bits (60), Expect = 3.3
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 455 AIFCIIYVVIVYLLTSQPPVWFRFAM-FLSSCLLISFVAQSVGLVVGAAMN--------- 504
+++C I+YLL PV F+ F + ++ VG+ +G +N
Sbjct: 376 SLYCSFVYAIIYLLLEAYPVIFQEGRHFPLGVSALPYIGILVGVFIGCGINCLFEPWYFR 435
Query: 505 --VQNGVFLAPVMSVPFLLFSGFFVSFNAIPVYLRWITYLSYIRY 547
++ G AP +P ++ F F A +L W Y +Y+ +
Sbjct: 436 QVIKAGNKPAPEARLPPMMIGSFL--FPAGIFWLAWSGYYTYVHW 478
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 28.3 bits (60), Expect = 3.3
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 24 LSSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSSTTRDEKEMLTETILHTLSLM-- 81
L+SF ++ + N LH + + VA L+ P S KE + IL + S +
Sbjct: 363 LASFNRIKSFSTDLNLLHAACKASDIIDVAIDLQSPMSIKVRRKETWSPWILPSESRLKF 422
Query: 82 EHRKTMTSNLSGGQKKRLSIALELVNNPPIM 112
E K N S S L +PP +
Sbjct: 423 EMAKYPQINSSSSMSPLASSISNLTISPPFI 453
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.9 bits (59), Expect = 4.4
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 20 MERNLSSFRKLSCYIMQDNQLHGNLTVEEAMGVAT-----SLKLPSSTTRDEKEMLTETI 74
ME N S + ++ DN +LT EE + + S +LPSST++DE +E
Sbjct: 1 MEENSSELDSNNFNVLVDNLAGLSLTDEEVRRILSPRKEGSRQLPSSTSKDED---SEEA 57
Query: 75 LHTLSLMEHRKTMTSNLSGGQKKRLSIALELVNNPPIMFFDEPTSGLDS 123
H R ++ S+ G + A ++ P+ DE + L+S
Sbjct: 58 SHKYDFEIDRDSLKSD--SGSPRLHQNATAPTSSTPLQSPDESVNKLNS 104
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/128 (18%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 203 SCGEYGNNTGKLVRAIDNGNNDIRNGMPFPDQTPDYNNKKDMEVSLRAGSNWDKNDLSQV 262
S E N L R+ D+ + +IR+ + PD + N D +++ + N ++ND ++
Sbjct: 43 SSSEPLENNSSLTRSTDDPSVEIRSKLVSPDN--EANLLSDQNITI-SNENNNENDTTEE 99
Query: 263 QEKFKDNN-SNGANGHGNLQNGILQYATSEVSKGEPLSLQMDTDKQDNAAAALLGTEGSP 321
E N ++ + + Q+ + + SE+ G ++D +++ + +G+
Sbjct: 100 AETSSGNEAADDEDSSSDAQSSVPSF--SEIHDGMS-EEELDKERKTLTHLRRISLQGAD 156
Query: 322 ERYATSEW 329
+ ++W
Sbjct: 157 DPEIPTDW 164
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 271 SNGANGHGNLQNGILQYATSEVSKGEPLSLQMDTDKQDNAAAALLGTE 318
+N A H ++G L+Y+ SK + D Q+N+ + + T+
Sbjct: 629 ANSARPHSGYEDGRLEYSADLASKSNRNEINTMQDVQENSISHVTATQ 676
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.137 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,860,779
Number of Sequences: 5004
Number of extensions: 124564
Number of successful extensions: 359
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 305
Number of HSP's gapped (non-prelim): 55
length of query: 620
length of database: 2,362,478
effective HSP length: 77
effective length of query: 543
effective length of database: 1,977,170
effective search space: 1073603310
effective search space used: 1073603310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)
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