GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005200-TA|BGIBMGA005200-PA|IPR002259|Delayed-early
response protein/equilibrative nucleoside transporter
         (449 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   1.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   2.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   6.9  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 7/24 (29%), Positives = 18/24 (75%)

Query: 229 IYFIIADVLVITSLISYISLYKID 252
           + FI++ +L++  ++ YIS++K +
Sbjct: 184 VVFIVSGLLMLVGMVMYISVFKAE 207


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 5   GSINSDICVENDEDLIEDSEEKELVTDSCSTKVLNI 40
           GS   D+  E D D  + S EK++   S   K+ NI
Sbjct: 190 GSSGDDLSSEWDSDYTDKSNEKKIPKSSGWRKLRNI 225


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 6/32 (18%)

Query: 321 FFVPVVNYLIFNCGDYSGRLVAGFLLRPLNQW 352
           F VP V+ ++F+CG         F   P N W
Sbjct: 273 FAVPAVSGMVFDCGGLE------FTAAPFNGW 298


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.138    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,916
Number of Sequences: 429
Number of extensions: 4383
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 449
length of database: 140,377
effective HSP length: 60
effective length of query: 389
effective length of database: 114,637
effective search space: 44593793
effective search space used: 44593793
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 45 (22.2 bits)