Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005193-TA|BGIBMGA005193-PA|IPR004294|Carotenoid
oxygenase
(371 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126210-1|AAI26211.1| 547|Homo sapiens beta-carotene 15,15'-mo... 167 7e-41
BC126212-1|AAI26213.1| 547|Homo sapiens beta-carotene 15,15'-mo... 166 1e-40
AF294900-1|AAG15380.1| 547|Homo sapiens beta, beta-carotene 15,... 166 1e-40
AK001592-1|BAA91776.1| 547|Homo sapiens protein ( Homo sapiens ... 165 2e-40
AF276432-1|AAK69433.1| 545|Homo sapiens putative carotene dioxy... 162 2e-39
AJ290393-1|CAC27994.1| 556|Homo sapiens putative b,b-carotene-9... 157 8e-38
AK027801-1|BAB55379.1| 539|Homo sapiens protein ( Homo sapiens ... 153 1e-36
U20510-1|AAC14586.1| 533|Homo sapiens retinal pigment epitheliu... 140 1e-32
U18991-1|AAA99012.1| 533|Homo sapiens retinal pigment epitheliu... 140 1e-32
BC075036-1|AAH75036.1| 533|Homo sapiens retinal pigment epithel... 140 1e-32
BC075035-1|AAH75035.1| 533|Homo sapiens retinal pigment epithel... 140 1e-32
AL139413-3|CAI18957.1| 533|Homo sapiens retinal pigment epithel... 140 1e-32
AF039868-1|AAC39660.1| 533|Homo sapiens retinal pigment epithel... 140 1e-32
BC041656-1|AAH41656.2| 506|Homo sapiens BCDO2 protein protein. 133 1e-30
AK091783-1|BAC03747.1| 351|Homo sapiens protein ( Homo sapiens ... 110 7e-24
DQ374435-1|ABD37636.1| 37|Homo sapiens retinal pigment epithel... 44 0.001
U83661-1|AAB71758.2| 1437|Homo sapiens multidrug resistance prot... 32 2.8
AY196484-1|AAO49801.1| 1394|Homo sapiens ATP-binding cassette C5... 32 2.8
AF146074-1|AAD37716.1| 1437|Homo sapiens ABC protein protein. 32 2.8
AF104942-1|AAD04169.1| 1437|Homo sapiens ABC transporter MOAT-C ... 32 2.8
AB209454-1|BAD92691.1| 1430|Homo sapiens Multidrug resistance-as... 32 2.8
AB019002-1|BAA76608.1| 1437|Homo sapiens MRP5 protein. 32 2.8
AB005659-1|BAA22887.1| 946|Homo sapiens SMRP protein. 32 2.8
>BC126210-1|AAI26211.1| 547|Homo sapiens beta-carotene
15,15'-monooxygenase 1 protein.
Length = 547
Score = 167 bits (405), Expect = 7e-41
Identities = 117/378 (30%), Positives = 194/378 (51%), Gaps = 35/378 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIV-KGGLRHVVVKFPYT- 75
+I+P TL+TL++ + +A+ TSHPH G+V N+G SIV KG ++V+ K P T
Sbjct: 146 KINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGKTKYVIFKIPATV 205
Query: 76 ----EKGDM-FERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQL 130
++G ++ +V S+ R L P+Y H+FG+TEN+ I +EQP + + + +
Sbjct: 206 PEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPFRLDILKMATAYI 265
Query: 131 ANKPLASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCA 189
+ AS L ++ +T I ++ ++ + + ++ T + H +N +E++G ++ D+ A
Sbjct: 266 RSMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTDAMVVFHHVNAYEEDGCIVFDVIA 325
Query: 190 YKDPKALDAMYVHAI-ETMQSNADYAEWFRGRPKRLELPLD-----APRLAKVVPTILAD 243
Y+D Y+ + + + N+ R + L +D L KV T
Sbjct: 326 YEDNSLYQLFYLANLNQDFKENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATA 385
Query: 244 L----------------GCETPRIHYDLYNGKPYRYFYAISSDVDAENPGTVIKADTVTG 287
L G E PR++Y +NGK YRY +A + P +IK D +T
Sbjct: 386 LKEEDGQVYCQPEFLYEGLELPRVNY-AHNGKQYRYVFATGVQW-SPIPTKIIKYDILTK 443
Query: 288 VTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTMLEVAR 347
+ W E +C+P+EP+FVP P AK+EDDGV+L A+V D + LL+LDA++ E+AR
Sbjct: 444 SSLKWREDDCWPAEPLFVPAPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELAR 502
Query: 348 AQFRTPSPAPKCLHGWFL 365
A LHG F+
Sbjct: 503 ASVDVDMHMD--LHGLFI 518
>BC126212-1|AAI26213.1| 547|Homo sapiens beta-carotene
15,15'-monooxygenase 1 protein.
Length = 547
Score = 166 bits (404), Expect = 1e-40
Identities = 117/378 (30%), Positives = 193/378 (51%), Gaps = 35/378 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIV-KGGLRHVVVKFPYT- 75
+I+P TL+TL++ + +A+ TSHPH G+V N+G SIV KG ++V+ K P T
Sbjct: 146 KINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGKTKYVIFKIPATV 205
Query: 76 ----EKGDM-FERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQL 130
++G ++ +V S+ R L P+Y H+FG+TEN+ I +EQP + + + +
Sbjct: 206 PEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPFRLDILKMATAYI 265
Query: 131 ANKPLASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCA 189
AS L ++ +T I ++ ++ + + ++ T + H +N +E++G ++ D+ A
Sbjct: 266 RRMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTDAMVVFHHVNAYEEDGCIVFDVIA 325
Query: 190 YKDPKALDAMYVHAI-ETMQSNADYAEWFRGRPKRLELPLD-----APRLAKVVPTILAD 243
Y+D Y+ + + + N+ R + L +D L KV T
Sbjct: 326 YEDNSLYQLFYLANLNQDFKENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATA 385
Query: 244 L----------------GCETPRIHYDLYNGKPYRYFYAISSDVDAENPGTVIKADTVTG 287
L G E PR++Y +NGK YRY +A + P +IK D +T
Sbjct: 386 LKEEDGQVYCQPEFLYEGLELPRVNY-AHNGKQYRYVFATGVQW-SPIPTKIIKYDILTK 443
Query: 288 VTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTMLEVAR 347
+ W E +C+P+EP+FVP P AK+EDDGV+L A+V D + LL+LDA++ E+AR
Sbjct: 444 SSLKWREDDCWPAEPLFVPAPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELAR 502
Query: 348 AQFRTPSPAPKCLHGWFL 365
A LHG F+
Sbjct: 503 ASVDVDMHMD--LHGLFI 518
>AF294900-1|AAG15380.1| 547|Homo sapiens beta, beta-carotene
15,15'- dioxygenase protein.
Length = 547
Score = 166 bits (404), Expect = 1e-40
Identities = 117/378 (30%), Positives = 193/378 (51%), Gaps = 35/378 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIV-KGGLRHVVVKFPYT- 75
+I+P TL+TL++ + +A+ TSHPH G+V N+G SIV KG ++V+ K P T
Sbjct: 146 KINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGKTKYVIFKIPATV 205
Query: 76 ----EKGDM-FERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQL 130
++G ++ +V S+ R L P+Y H+FG+TEN+ I +EQP + + + +
Sbjct: 206 PEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPFRLDILKMATAYI 265
Query: 131 ANKPLASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCA 189
AS L ++ +T I ++ ++ + + ++ T + H +N +E++G ++ D+ A
Sbjct: 266 RRMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTDAMVVFHHVNAYEEDGCIVFDVIA 325
Query: 190 YKDPKALDAMYVHAI-ETMQSNADYAEWFRGRPKRLELPLD-----APRLAKVVPTILAD 243
Y+D Y+ + + + N+ R + L +D L KV T
Sbjct: 326 YEDNSLYQLFYLANLNQDFKENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATA 385
Query: 244 L----------------GCETPRIHYDLYNGKPYRYFYAISSDVDAENPGTVIKADTVTG 287
L G E PR++Y +NGK YRY +A + P +IK D +T
Sbjct: 386 LKEEDGQVYCQPEFLYEGLELPRVNY-AHNGKQYRYVFATGVQW-SPIPTKIIKYDILTK 443
Query: 288 VTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTMLEVAR 347
+ W E +C+P+EP+FVP P AK+EDDGV+L A+V D + LL+LDA++ E+AR
Sbjct: 444 SSLKWREDDCWPAEPLFVPAPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELAR 502
Query: 348 AQFRTPSPAPKCLHGWFL 365
A LHG F+
Sbjct: 503 ASVDVDMHMD--LHGLFI 518
>AK001592-1|BAA91776.1| 547|Homo sapiens protein ( Homo sapiens
cDNA FLJ10730 fis, clone NT2RP3001307. ).
Length = 547
Score = 165 bits (402), Expect = 2e-40
Identities = 117/378 (30%), Positives = 193/378 (51%), Gaps = 35/378 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIV-KGGLRHVVVKFPYT- 75
+I+P TL+TL++ + +A+ TSHPH G+V N+G SIV KG ++V+ K P T
Sbjct: 146 KINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSIVEKGKTKYVIFKIPATV 205
Query: 76 ----EKGDM-FERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQL 130
++G ++ +V S+ R L P+Y H+FG+TEN+ I +EQP + + + +
Sbjct: 206 PEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYVIFLEQPFRLDILKMATAYI 265
Query: 131 ANKPLASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCA 189
AS L ++ +T I ++ ++ + + ++ T + H +N +E++G ++ D+ A
Sbjct: 266 RRMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTGAMVVFHHVNAYEEDGCIVFDVIA 325
Query: 190 YKDPKALDAMYVHAI-ETMQSNADYAEWFRGRPKRLELPLD-----APRLAKVVPTILAD 243
Y+D Y+ + + + N+ R + L +D L KV T
Sbjct: 326 YEDNSLYQLFYLANLNQDFKENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATA 385
Query: 244 L----------------GCETPRIHYDLYNGKPYRYFYAISSDVDAENPGTVIKADTVTG 287
L G E PR++Y +NGK YRY +A + P +IK D +T
Sbjct: 386 LKEEDGQVYCQPEFLYEGLELPRVNY-AHNGKQYRYVFATGVQW-SPIPTKIIKYDILTK 443
Query: 288 VTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTMLEVAR 347
+ W E +C+P+EP+FVP P AK+EDDGV+L A+V D + LL+LDA++ E+AR
Sbjct: 444 SSLKWREDDCWPAEPLFVPAPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELAR 502
Query: 348 AQFRTPSPAPKCLHGWFL 365
A LHG F+
Sbjct: 503 ASVDVDMHMD--LHGLFI 518
>AF276432-1|AAK69433.1| 545|Homo sapiens putative carotene
dioxygenase protein.
Length = 545
Score = 162 bits (393), Expect = 2e-39
Identities = 109/384 (28%), Positives = 174/384 (45%), Gaps = 40/384 (10%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKGGLRHVVVKFP--YT 75
++D TL+ ++ + + IA+ T+HPH P+G YN+G S G + V++ P
Sbjct: 166 KVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGPYGFSYKVIRVPPEKV 225
Query: 76 EKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKPL 135
+ G+ +V+ S+ P+Y H+FG+T N+ I +EQP+ ++L + +++ K
Sbjct: 226 DLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAF 285
Query: 136 ASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCAYKDPK 194
+ + W P T ++ ++ G+ RY ++ H IN FE G VI+DLC + +
Sbjct: 286 SDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGR 345
Query: 195 ALDAMYVHAIETMQSNAD--YAEWFRGRPKRLELP----LDAPR----------LAKVVP 238
L+ + + D + + P+R LP L+AP A V
Sbjct: 346 TLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVK 405
Query: 239 TILADLGCETPRIH----------------YDLYNGKPYRYFYAISSDVDAENPGTVIKA 282
+ C +H YD ++GK Y +FY + ++IK
Sbjct: 406 QADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGD--SLIKV 463
Query: 283 DTVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTM 342
D V K W E YPSEPVFVP P ED GV+L ++ E LLVLDA+
Sbjct: 464 DVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNF-LLVLDAKNF 522
Query: 343 LEVARAQFRTPSPAPKCLHGWFLP 366
E+ RA+ P P HG F+P
Sbjct: 523 EELGRAE--VPVQMPYGFHGTFIP 544
>AJ290393-1|CAC27994.1| 556|Homo sapiens putative
b,b-carotene-9',10'-dioxygenase protein.
Length = 556
Score = 157 bits (380), Expect = 8e-38
Identities = 109/384 (28%), Positives = 174/384 (45%), Gaps = 40/384 (10%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKGGLRHVVVKFPYTEK 77
++D TL+ ++ + + IA+ T+HPH P+G YN+G S G + V++ P E
Sbjct: 177 KVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGPYGFSYKVIRVPPEEV 236
Query: 78 --GDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKPL 135
G+ +V+ S+ P+Y H+FG+T N+ I +EQP+ ++L + +++ K
Sbjct: 237 DLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAF 296
Query: 136 ASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCAYKDPK 194
+ + W P T ++ ++ G+ RY ++ H IN FE G VI+DLC + +
Sbjct: 297 SDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGR 356
Query: 195 ALDAMYVHAIETMQSNAD--YAEWFRGRPKRLELP----LDAPR----------LAKVVP 238
L+ + + D + + P+R LP L+AP A V
Sbjct: 357 TLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVK 416
Query: 239 TILADLGCETPRIHYD------------LY----NGKPYRYFYAISSDVDAENPGTVIKA 282
+ C +H + +Y +GK Y +FY + ++IK
Sbjct: 417 QADGTICCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGD--SLIKV 474
Query: 283 DTVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTM 342
D V K W E YPSEPVFVP P ED GV+L ++ E LLVLDA+
Sbjct: 475 DVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNF-LLVLDAKNF 533
Query: 343 LEVARAQFRTPSPAPKCLHGWFLP 366
E+ RA+ P P HG F+P
Sbjct: 534 EELGRAE--VPVQMPYGFHGTFIP 555
>AK027801-1|BAB55379.1| 539|Homo sapiens protein ( Homo sapiens
cDNA FLJ14895 fis, clone PLACE1004646, weakly similar to
B.taurus mRNA for retinal pigment epithelial membrane
receptor ).
Length = 539
Score = 153 bits (370), Expect = 1e-36
Identities = 106/384 (27%), Positives = 171/384 (44%), Gaps = 46/384 (11%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKGGLRHVVVKFP--YT 75
++D TL+ ++ + + IA+ T+HPH P+G YN+G S G + V++ P
Sbjct: 166 KVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGPYGFSYKVIRVPPEKV 225
Query: 76 EKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKPL 135
+ G+ +V+ S+ P+Y H+FG+T N+ I +EQP+ ++L + +++ K
Sbjct: 226 DLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAF 285
Query: 136 ASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCAYKDPK 194
+ + W P T ++ ++ G+ RY ++ H IN FE G VI+DLC + +
Sbjct: 286 SDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGR 345
Query: 195 ALDAMYVHAIETMQSNAD--YAEWFRGRPKRLELP----LDAPR----------LAKVVP 238
L+ + + D + + P+R LP L+AP A V
Sbjct: 346 TLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVK 405
Query: 239 TILADLGCETPRIH----------------YDLYNGKPYRYFYAISSDVDAENPGTVIKA 282
+ C +H YD ++GK Y +FY +
Sbjct: 406 QADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGF--------RHLVG 457
Query: 283 DTVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTM 342
D++ V W E YPSEPVFVP P ED GV+L ++ E LLVLDA+
Sbjct: 458 DSLIKVDVVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNF-LLVLDAKNF 516
Query: 343 LEVARAQFRTPSPAPKCLHGWFLP 366
E+ RA+ P P HG F+P
Sbjct: 517 EELGRAE--VPVQMPYGFHGTFIP 538
>U20510-1|AAC14586.1| 533|Homo sapiens retinal pigment
epithelium-specific 61 kDa protein protein.
Length = 533
Score = 140 bits (338), Expect = 1e-32
Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKG-GLRHVVVKFP--Y 74
+I+P TL+T+ + ++ + +++ T+HPH+ +G VYN+G K + + +VK P
Sbjct: 154 KINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQ 213
Query: 75 TEKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKP 134
+K D ++++V P+Y+H+FG+T N+ + VE P+ ++L + + +
Sbjct: 214 ADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSW--SLW 271
Query: 135 LASSLHWYPNHETNIVLLSRKDGKEWK----RYRTQTLFFLHIINCFEKNGSVIVDLCAY 190
A+ + + ++ET V L D K K +YRT H IN +E NG +IVDLC +
Sbjct: 272 GANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNGFLIVDLCCW 331
Query: 191 KDPK-ALDAMYVHAI----ETMQSNADYAEWFRGRPKRLELPLD----APRLAKVVPTIL 241
K + + +Y+ + E ++ NA A R L L +D L + T
Sbjct: 332 KGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTA 391
Query: 242 ADLGC--ET-----------PR--IHYDLYNGKPY---RYFYAISSDVDAENPGTVIKAD 283
+ C ET PR + N + Y Y YA ++ P + K +
Sbjct: 392 TAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGLNHFVPDRLCKLN 451
Query: 284 TVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTML 343
T T W EP+ YPSEP+FV PDA EDDGV+L +V G + LL+L+A+ +
Sbjct: 452 VKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLS 511
Query: 344 EVARAQFRTPSPAPKCLHGWF 364
EVARA+ P HG F
Sbjct: 512 EVARAEVEINIPV--TFHGLF 530
>U18991-1|AAA99012.1| 533|Homo sapiens retinal pigment
epithelium-specific 61 kDa protein protein.
Length = 533
Score = 140 bits (338), Expect = 1e-32
Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKG-GLRHVVVKFP--Y 74
+I+P TL+T+ + ++ + +++ T+HPH+ +G VYN+G K + + +VK P
Sbjct: 154 KINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQ 213
Query: 75 TEKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKP 134
+K D ++++V P+Y+H+FG+T N+ + VE P+ ++L + + +
Sbjct: 214 ADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSW--SLW 271
Query: 135 LASSLHWYPNHETNIVLLSRKDGKEWK----RYRTQTLFFLHIINCFEKNGSVIVDLCAY 190
A+ + + ++ET V L D K K +YRT H IN +E NG +IVDLC +
Sbjct: 272 GANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNGFLIVDLCCW 331
Query: 191 KDPK-ALDAMYVHAI----ETMQSNADYAEWFRGRPKRLELPLD----APRLAKVVPTIL 241
K + + +Y+ + E ++ NA A R L L +D L + T
Sbjct: 332 KGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTA 391
Query: 242 ADLGC--ET-----------PR--IHYDLYNGKPY---RYFYAISSDVDAENPGTVIKAD 283
+ C ET PR + N + Y Y YA ++ P + K +
Sbjct: 392 TAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGLNHFVPDRLCKLN 451
Query: 284 TVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTML 343
T T W EP+ YPSEP+FV PDA EDDGV+L +V G + LL+L+A+ +
Sbjct: 452 VKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLS 511
Query: 344 EVARAQFRTPSPAPKCLHGWF 364
EVARA+ P HG F
Sbjct: 512 EVARAEVEINIPV--TFHGLF 530
>BC075036-1|AAH75036.1| 533|Homo sapiens retinal pigment
epithelium-specific protein 65kDa protein.
Length = 533
Score = 140 bits (338), Expect = 1e-32
Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKG-GLRHVVVKFP--Y 74
+I+P TL+T+ + ++ + +++ T+HPH+ +G VYN+G K + + +VK P
Sbjct: 154 KINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQ 213
Query: 75 TEKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKP 134
+K D ++++V P+Y+H+FG+T N+ + VE P+ ++L + + +
Sbjct: 214 ADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSW--SLW 271
Query: 135 LASSLHWYPNHETNIVLLSRKDGKEWK----RYRTQTLFFLHIINCFEKNGSVIVDLCAY 190
A+ + + ++ET V L D K K +YRT H IN +E NG +IVDLC +
Sbjct: 272 GANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNGFLIVDLCCW 331
Query: 191 KDPK-ALDAMYVHAI----ETMQSNADYAEWFRGRPKRLELPLD----APRLAKVVPTIL 241
K + + +Y+ + E ++ NA A R L L +D L + T
Sbjct: 332 KGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTA 391
Query: 242 ADLGC--ET-----------PR--IHYDLYNGKPY---RYFYAISSDVDAENPGTVIKAD 283
+ C ET PR + N + Y Y YA ++ P + K +
Sbjct: 392 TAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGLNHFVPDRLCKLN 451
Query: 284 TVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTML 343
T T W EP+ YPSEP+FV PDA EDDGV+L +V G + LL+L+A+ +
Sbjct: 452 VKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLS 511
Query: 344 EVARAQFRTPSPAPKCLHGWF 364
EVARA+ P HG F
Sbjct: 512 EVARAEVEINIPV--TFHGLF 530
>BC075035-1|AAH75035.1| 533|Homo sapiens retinal pigment
epithelium-specific protein 65kDa protein.
Length = 533
Score = 140 bits (338), Expect = 1e-32
Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKG-GLRHVVVKFP--Y 74
+I+P TL+T+ + ++ + +++ T+HPH+ +G VYN+G K + + +VK P
Sbjct: 154 KINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQ 213
Query: 75 TEKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKP 134
+K D ++++V P+Y+H+FG+T N+ + VE P+ ++L + + +
Sbjct: 214 ADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSW--SLW 271
Query: 135 LASSLHWYPNHETNIVLLSRKDGKEWK----RYRTQTLFFLHIINCFEKNGSVIVDLCAY 190
A+ + + ++ET V L D K K +YRT H IN +E NG +IVDLC +
Sbjct: 272 GANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNGFLIVDLCCW 331
Query: 191 KDPK-ALDAMYVHAI----ETMQSNADYAEWFRGRPKRLELPLD----APRLAKVVPTIL 241
K + + +Y+ + E ++ NA A R L L +D L + T
Sbjct: 332 KGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTA 391
Query: 242 ADLGC--ET-----------PR--IHYDLYNGKPY---RYFYAISSDVDAENPGTVIKAD 283
+ C ET PR + N + Y Y YA ++ P + K +
Sbjct: 392 TAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGLNHFVPDRLCKLN 451
Query: 284 TVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTML 343
T T W EP+ YPSEP+FV PDA EDDGV+L +V G + LL+L+A+ +
Sbjct: 452 VKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLS 511
Query: 344 EVARAQFRTPSPAPKCLHGWF 364
EVARA+ P HG F
Sbjct: 512 EVARAEVEINIPV--TFHGLF 530
>AL139413-3|CAI18957.1| 533|Homo sapiens retinal pigment
epithelium-specific protein 65kDa protein.
Length = 533
Score = 140 bits (338), Expect = 1e-32
Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKG-GLRHVVVKFP--Y 74
+I+P TL+T+ + ++ + +++ T+HPH+ +G VYN+G K + + +VK P
Sbjct: 154 KINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQ 213
Query: 75 TEKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKP 134
+K D ++++V P+Y+H+FG+T N+ + VE P+ ++L + + +
Sbjct: 214 ADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSW--SLW 271
Query: 135 LASSLHWYPNHETNIVLLSRKDGKEWK----RYRTQTLFFLHIINCFEKNGSVIVDLCAY 190
A+ + + ++ET V L D K K +YRT H IN +E NG +IVDLC +
Sbjct: 272 GANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNGFLIVDLCCW 331
Query: 191 KDPK-ALDAMYVHAI----ETMQSNADYAEWFRGRPKRLELPLD----APRLAKVVPTIL 241
K + + +Y+ + E ++ NA A R L L +D L + T
Sbjct: 332 KGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTA 391
Query: 242 ADLGC--ET-----------PR--IHYDLYNGKPY---RYFYAISSDVDAENPGTVIKAD 283
+ C ET PR + N + Y Y YA ++ P + K +
Sbjct: 392 TAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGLNHFVPDRLCKLN 451
Query: 284 TVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTML 343
T T W EP+ YPSEP+FV PDA EDDGV+L +V G + LL+L+A+ +
Sbjct: 452 VKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLS 511
Query: 344 EVARAQFRTPSPAPKCLHGWF 364
EVARA+ P HG F
Sbjct: 512 EVARAEVEINIPV--TFHGLF 530
>AF039868-1|AAC39660.1| 533|Homo sapiens retinal pigment
epithelium-specific protein protein.
Length = 533
Score = 140 bits (338), Expect = 1e-32
Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 38/381 (9%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKG-GLRHVVVKFP--Y 74
+I+P TL+T+ + ++ + +++ T+HPH+ +G VYN+G K + + +VK P
Sbjct: 154 KINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKIPPLQ 213
Query: 75 TEKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKP 134
+K D ++++V P+Y+H+FG+T N+ + VE P+ ++L + + +
Sbjct: 214 ADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFLSSW--SLW 271
Query: 135 LASSLHWYPNHETNIVLLSRKDGKEWK----RYRTQTLFFLHIINCFEKNGSVIVDLCAY 190
A+ + + ++ET V L D K K +YRT H IN +E NG +IVDLC +
Sbjct: 272 GANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTYEDNGFLIVDLCCW 331
Query: 191 KDPK-ALDAMYVHAI----ETMQSNADYAEWFRGRPKRLELPLD----APRLAKVVPTIL 241
K + + +Y+ + E ++ NA A R L L +D L + T
Sbjct: 332 KGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTA 391
Query: 242 ADLGC--ET-----------PR--IHYDLYNGKPY---RYFYAISSDVDAENPGTVIKAD 283
+ C ET PR + N + Y Y YA ++ P + K +
Sbjct: 392 TAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGLGLNHFVPDRLCKLN 451
Query: 284 TVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDREHEVALLVLDARTML 343
T T W EP+ YPSEP+FV PDA EDDGV+L +V G + LL+L+A+ +
Sbjct: 452 VKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLS 511
Query: 344 EVARAQFRTPSPAPKCLHGWF 364
EVARA+ P HG F
Sbjct: 512 EVARAEVEINIPV--TFHGLF 530
>BC041656-1|AAH41656.2| 506|Homo sapiens BCDO2 protein protein.
Length = 506
Score = 133 bits (321), Expect = 1e-30
Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 40/338 (11%)
Query: 64 GLRHVVVKFP--YTEKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVS 121
G + V++ P + G+ +V+ S+ P+Y H+FG+T N+ I +EQP+ ++
Sbjct: 173 GFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMN 232
Query: 122 LCGVVRNQLANKPLASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKN 180
L + +++ K + + W P T ++ ++ G+ RY ++ H IN FE
Sbjct: 233 LWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQ 292
Query: 181 GSVIVDLCAYKDPKALDAMYVHAIETMQSNAD--YAEWFRGRPKRLELP----LDAPR-- 232
G VI+DLC + + L+ + + D + + P+R LP L+AP
Sbjct: 293 GCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLNAPEGD 352
Query: 233 --------LAKVVPTILADLGCETPRIH----------------YDLYNGKPYRYFYAIS 268
A V + C +H YD ++GK Y +FY
Sbjct: 353 NLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHFFYGCG 412
Query: 269 SDVDAENPGTVIKADTVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDDGVLLCALVWGGDR 328
+ ++IK D V K W E YPSEPVFVP P ED GV+L ++
Sbjct: 413 FRHLVGD--SLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQN 470
Query: 329 EHEVALLVLDARTMLEVARAQFRTPSPAPKCLHGWFLP 366
E LLVLDA+ E+ RA+ P P HG F+P
Sbjct: 471 ESNF-LLVLDAKNFEELGRAE--VPVQMPYGFHGTFIP 505
>AK091783-1|BAC03747.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ34464 fis, clone HLUNG2003049, weakly similar to
Ambystoma tigrinum RPE65 protein mRNA. ).
Length = 351
Score = 110 bits (265), Expect = 7e-24
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 5/217 (2%)
Query: 18 RIDPVTLDTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVGMSIVKGGLRHVVVKFP--YT 75
++D TL+ ++ + + IA+ T+HPH P+G YN+G S G + V++ P
Sbjct: 27 KVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGPYGFSYKVIRVPPEKV 86
Query: 76 EKGDMFERAKVVASLKPRWPLHPAYMHTFGITENFFIIVEQPMSVSLCGVVRNQLANKPL 135
+ G+ +V+ S+ P+Y H+FG+T N+ I +EQP+ ++L + +++ K
Sbjct: 87 DLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAF 146
Query: 136 ASSLHWYPNHETNIVLLSRKDGKEWK-RYRTQTLFFLHIINCFEKNGSVIVDLCAYKDPK 194
+ + W P T ++ ++ G+ RY ++ H IN FE G VI+DLC + +
Sbjct: 147 SDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGR 206
Query: 195 ALDAMYVHAIETMQSNAD--YAEWFRGRPKRLELPLD 229
L+ + + D + + P+R LPL+
Sbjct: 207 TLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLN 243
Score = 32.3 bits (70), Expect = 2.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 245 GCETPRIHYDLYNGKPYRYFY 265
G E P+I+YD ++GK Y +FY
Sbjct: 289 GIEFPQIYYDRFSGKKYHFFY 309
>DQ374435-1|ABD37636.1| 37|Homo sapiens retinal pigment
epithelium-specific protein protein.
Length = 37
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 281 KADTVTGVTKTWCEPNCYPSEPVFVPTPDAKNEDD 315
K + T T W EP+ YPSEP+FV PDA EDD
Sbjct: 3 KLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDD 37
>U83661-1|AAB71758.2| 1437|Homo sapiens multidrug resistance protein 5
protein.
Length = 1437
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 25 DTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVG----MSIVKGGLRH 67
D L+R +M +CIA + VM NGD ++VG + I + LRH
Sbjct: 1301 DALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRH 1347
>AY196484-1|AAO49801.1| 1394|Homo sapiens ATP-binding cassette C5
splicing variant A protein.
Length = 1394
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 25 DTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVG----MSIVKGGLRH 67
D L+R +M +CIA + VM NGD ++VG + I + LRH
Sbjct: 1258 DALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRH 1304
>AF146074-1|AAD37716.1| 1437|Homo sapiens ABC protein protein.
Length = 1437
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 25 DTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVG----MSIVKGGLRH 67
D L+R +M +CIA + VM NGD ++VG + I + LRH
Sbjct: 1301 DALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRH 1347
>AF104942-1|AAD04169.1| 1437|Homo sapiens ABC transporter MOAT-C
protein.
Length = 1437
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 25 DTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVG----MSIVKGGLRH 67
D L+R +M +CIA + VM NGD ++VG + I + LRH
Sbjct: 1301 DALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRH 1347
>AB209454-1|BAD92691.1| 1430|Homo sapiens Multidrug
resistance-associated protein 5 variant protein.
Length = 1430
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 25 DTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVG----MSIVKGGLRH 67
D L+R +M +CIA + VM NGD ++VG + I + LRH
Sbjct: 1294 DALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRH 1340
>AB019002-1|BAA76608.1| 1437|Homo sapiens MRP5 protein.
Length = 1437
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 25 DTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVG----MSIVKGGLRH 67
D L+R +M +CIA + VM NGD ++VG + I + LRH
Sbjct: 1301 DALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRH 1347
>AB005659-1|BAA22887.1| 946|Homo sapiens SMRP protein.
Length = 946
Score = 32.3 bits (70), Expect = 2.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 25 DTLDRKNMTDCIALVNHTSHPHVMPNGDVYNVG----MSIVKGGLRH 67
D L+R +M +CIA + VM NGD ++VG + I + LRH
Sbjct: 810 DALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRH 856
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.138 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,465,591
Number of Sequences: 224733
Number of extensions: 2619319
Number of successful extensions: 4250
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4165
Number of HSP's gapped (non-prelim): 38
length of query: 371
length of database: 73,234,838
effective HSP length: 91
effective length of query: 280
effective length of database: 52,784,135
effective search space: 14779557800
effective search space used: 14779557800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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