GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005190-TA|BGIBMGA005190-PA|IPR008973|C2
calcium/lipid-binding region, CaLB, IPR009054|DNA topoisomerases I,
dispensable insert, eukaryotic-type,
IPR001192|Phosphoinositide-specific phospholipase C, C-terminal (PLC),
IPR000909|Phosphatidylinositol-specific phospholipase C, X region,
IPR001711|Phosphatidylinositol-specific phospholipase C, Y domain,
IPR000008|C2 calcium-dependent membrane targeting,
IPR013841|Phosphatidylinositol-specific phospholipase C, X and Y boxes
         (952 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    33   0.011
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   1.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   5.1  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 33.1 bits (72), Expect = 0.011
 Identities = 17/55 (30%), Positives = 32/55 (58%)

Query: 713 KKLIETESIVTLPIPPPIDTKEQEKKANGTDESLAETLETLLNSKLVRLKEAELA 767
           K+LIE+E  +   I   I+T  QEK+ +  DES+    +++L  K + +++ + A
Sbjct: 269 KQLIESEDAIYNIISEIIETTIQEKRDDAKDESVEAIFQSILRQKNLDIRDKKAA 323


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 879 KTNRDKD-EIQRIKREIHSQSVERGVSECCRLEQAYTKRREQLARDHEKLLQMLLKHRDQ 937
           K + D D  +  ++RE    S E   S     +    +R E++A D   + Q LL+ + +
Sbjct: 303 KLDEDADGAVSPLRREKDRGSREYPTSNATDTDGT-KERTEEVALDRTPVTQGLLRVKKE 361

Query: 938 ELVKLDRLCGGTP 950
           E ++    CGG P
Sbjct: 362 EELQEAPSCGGGP 374



 Score = 25.4 bits (53), Expect = 2.2
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 648 KLSELAEALANPIKYQSELDKREHQL--AVLTDGTDEPEQE 686
           KL E A+   +P++ + +   RE+    A  TDGT E  +E
Sbjct: 303 KLDEDADGAVSPLRREKDRGSREYPTSNATDTDGTKERTEE 343


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 436 YNKHQLSRVYPAGTRFDSSNFMPQ 459
           +  H+   +YP    FD  NF+P+
Sbjct: 445 FKLHRQPHIYPNPDVFDPDNFLPE 468


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.133    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,853
Number of Sequences: 429
Number of extensions: 9558
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 6
length of query: 952
length of database: 140,377
effective HSP length: 64
effective length of query: 888
effective length of database: 112,921
effective search space: 100273848
effective search space used: 100273848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)