GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005187-TA|BGIBMGA005187-PA|IPR013818|Lipase, N-terminal,
IPR000734|Lipase
         (279 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   9.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 225 CPHTSGLLEGDTRCCLDEQYAAAATSPPAP 254
           CPH      G T    DE + A+ +  P P
Sbjct: 536 CPHRRRANSGSTSSGDDELHRASLSKTPQP 565


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 187 CSVRVPPGRAQALPVPVGQPAPMTASG 213
           C V +  G +   P P   P P ++SG
Sbjct: 326 CLVNIVLGDSDTPPKPAPPPPPPSSSG 352


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 142 CLNGGRSQPYCEDTPNEALC-SHIWSVCYQ 170
           C+N  +S   CE+  N  +C S + S  Y+
Sbjct: 118 CINANKSTDKCENGLNFIICFSKLLSDMYE 147


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.140    0.459 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,125
Number of Sequences: 429
Number of extensions: 3406
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 279
length of database: 140,377
effective HSP length: 57
effective length of query: 222
effective length of database: 115,924
effective search space: 25735128
effective search space used: 25735128
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)