GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005186-TA|BGIBMGA005186-PA|IPR007858|Dpy-30
         (110 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   1.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   2.6  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   3.4  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   4.5  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    20   5.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   5.9  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               20   7.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   7.8  

>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 11/51 (21%), Positives = 23/51 (45%)

Query: 12  KEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLDQTVVPI 62
           + EQ + K  +S +K     K+   +   + R   + +    Y++Q  VP+
Sbjct: 277 EREQKSYKNENSYRKYRETSKERSRDRRERGRSREHRIIPSHYIEQIPVPV 327


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 2/40 (5%)

Query: 1   MSESS-TQINHNKEEQSTTKIPDSVKKIILMEKDNEANAN 39
           +S+S+  +IN+++ ++S ++  +S  + ILM   NE N N
Sbjct: 440 LSDSTMNKINNHEYKRSVSRESNS-NQFILMTTVNEGNNN 478


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 12/60 (20%), Positives = 26/60 (43%)

Query: 3   ESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLDQTVVPI 62
           E+S + + +K E+  +K    +  +      N +N N  +  +        Y++Q  VP+
Sbjct: 299 ETSKERSRDKTERERSKERKIISSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 358


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 3   ESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLDQTVVPI 62
           E S + + +K E+  +K    +  +      N +N N  +  +        Y++Q  VP+
Sbjct: 61  ERSKERSRDKRERERSKERKIISSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 120


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 3   ESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLDQTVVPI 62
           E S + + +K E+  +K    +  +      N +N N  +  +        Y++Q  VP+
Sbjct: 61  ERSKERSRDKRERERSKERKIISSLSNNYISNISNYNNDNNYNKKLYYNINYIEQIPVPV 120


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 44  IDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYL 82
           I +  +P  Q  D T++  + + LS+    +PP    Y+
Sbjct: 791 IPVYCVPVPQVNDSTILSPVREKLSSSQPMQPPQQNPYM 829


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 20  IPDSVKKIILMEKDNEANANR 40
           + DS++KII    DN  N ++
Sbjct: 90  LKDSIRKIIRQCVDNAKNEDK 110


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 2   SESSTQINHNKEEQSTTKI 20
           + SST    ++EE++TT +
Sbjct: 754 ANSSTSSEESREEKATTSL 772


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.126    0.333 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,209
Number of Sequences: 429
Number of extensions: 1236
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 110
length of database: 140,377
effective HSP length: 50
effective length of query: 60
effective length of database: 118,927
effective search space:  7135620
effective search space used:  7135620
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.4 bits)
S2: 39 (19.8 bits)