Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005183-TA|BGIBMGA005183-PA|undefined
(479 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 36 0.009
SPBC1271.13 |mrpl8||mitochondrial ribosomal protein subunit L8|S... 35 0.022
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 32 0.20
SPAC664.08c |||traub transciption factor family protein |Schizos... 31 0.35
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 30 0.62
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.82
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 29 1.4
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.9
SPAC1782.03 |||microfibrillar-associated protein family protein|... 28 2.5
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 28 3.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 3.3
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 28 3.3
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 28 3.3
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 4.4
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.4
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 27 4.4
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 5.8
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 5.8
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 5.8
SPAC1002.04c |taf11||transcription factor TFIID complex subunit ... 27 7.6
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 36.3 bits (80), Expect = 0.009
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 218 PEISLYASPIDAKPPRSPLSEAPYASVEEVQEFDDRLRNSPSRQIDNIADHKDLRIVXXX 277
P S ++ KP S A ++E V E N+ S+ + + + KD V
Sbjct: 322 PTASTKEVVVEKKPDESRKQAA--RTLETVSEEQMGSSNAKSKVLTS--EPKDSTSVEAE 377
Query: 278 XXXXXXXSLERKTSQVTEML-ISEILASRNNNKDEANTVIDKGKDSENITKENESHQMQL 336
++ + S V++ ISE ++N + EAN + +K E ++E+++ L
Sbjct: 378 KTETDEPAVGKGASDVSDTAEISEKTEAKNADS-EAN-LEEKSDVGEEKESKDENNKASL 435
Query: 337 MKDMNNHEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDS-EQNYAMSSVNSENVDD 395
KD+ + I T ++++DV ++ ET IE N + DS E + S+ D
Sbjct: 436 HKDVEEKDTKITNEDTGKTETDV-KAKETDSIEANDKDEKTDSKETEDKVEETESKEADV 494
Query: 396 DYEHAYAYIVDD 407
+ + VDD
Sbjct: 495 KAKETDSIEVDD 506
>SPBC1271.13 |mrpl8||mitochondrial ribosomal protein subunit
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 207
Score = 35.1 bits (77), Expect = 0.022
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 256 NSPSRQIDNIADHKDLRIVXXXXXXXXXXSLERKTSQVTEMLISEILASRNNNKDEANTV 315
N+P ++ + KD+R + ++ + +T I ++L R N K E + +
Sbjct: 110 NAPMGVLEFVDGPKDIRFHMTAKTVGICLAQQKALTPITRKNIHKVLLFRKNGKAEFDQL 169
Query: 316 IDKGKDSENI-TKENESHQMQLMKD 339
+ K K+SE+ KE+ + + KD
Sbjct: 170 VQKEKESEHARLKEDHEDEKTVKKD 194
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 31.9 bits (69), Expect = 0.20
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 215 KESPEISLYASPIDAKPPRSPLSEAPYASVEEVQ----EFDDRLRNSPSRQ 261
K+ P+ S A+P D+K PR +E P S EV E D +SPS++
Sbjct: 347 KQLPDASSQATPADSKEPRKEEAEKPVTSATEVSSEKVEKVDGNTSSPSKE 397
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 31.1 bits (67), Expect = 0.35
Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 7/145 (4%)
Query: 298 ISEILASRNNNKDEANTVIDKGKD---SENITKENESHQMQ-LMKDMNNHEMLIYELQTM 353
+ + + R ++ +E N + + SE+ + ++ Q+ K + ++
Sbjct: 26 LEDAFSDREDSSEEENDTLGREHYVDVSESKLRSKQAPQLDPKFKGRKTSRQELLNSGSL 85
Query: 354 RSQSDVPQSFETKDIERNGHCDSEDSEQ--NYAMSSVNSENVDDDYEHAYAYIVDDDLKS 411
SQS P E + + N SED E + SS++ EN DDD A D LK
Sbjct: 86 NSQSSSPSEEEDSEEDENDAV-SEDHENFSSSEASSISEENEDDDQSSAIPEKDMDRLKK 144
Query: 412 RLRKQFRAISTMSLQGLPPLPKSLS 436
+ + + + L + K L+
Sbjct: 145 IINGEKKLSDQIRTSALEDMKKGLA 169
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 30.3 bits (65), Expect = 0.62
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 302 LASRNNNKDEANTVID--KGKDSENITK-ENESHQMQLMKDMNNHEMLIYELQTMRSQSD 358
L S ++ +EA T + K EN TK EN MQ+ KD H L
Sbjct: 347 LRSDSSKPNEAPTSSENIKADQPENSTKQENPEEDMQI-KDAEEHSNL----------ES 395
Query: 359 VPQSFETKDIERNGHCDSEDSEQNYAMSSVNSEN 392
P + +T ++E N H + S +VN EN
Sbjct: 396 TPAAQQTSEVEANNHQEKPSSLPAVEQINVNEEN 429
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.9 bits (64), Expect = 0.82
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 294 TEMLISEILASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEMLIYELQTM 353
T+ +SEI+ N K+E V SE +K+ E + M+ + + + +
Sbjct: 1458 TQRKLSEIMDILNTTKEELEKVRQNSNKSEGTSKDTEIPNEEEME-----RKKVMQQEVL 1512
Query: 354 RSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDDDYEHA 400
R +S + + + ++ R + +D + + V+SE + HA
Sbjct: 1513 RLRSRIAKELQKNELLRKQNQVLQDQVKALQETVVSSEEAESASVHA 1559
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 29.1 bits (62), Expect = 1.4
Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 12/163 (7%)
Query: 285 SLERKTSQVTEMLISEILASRNNNKDEANTVIDKGKDS--ENITKENESHQMQLMKDMNN 342
+L + Q L+ E L S ++ DE ++ K + E + KEN + + K ++
Sbjct: 16 ALRKLQRQRQTELLEEALDSESDEDDEFSSTSGKKVVNVFEILEKENNAINSEAEKSVSE 75
Query: 343 HEM----------LIYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSEN 392
E ++ + +++ + + K + D++ S+ +S+N
Sbjct: 76 EEQDEPLVEGESPIVSTNKKAKNKKKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKN 135
Query: 393 VDDDYEHAYAYIVDDDLKSRLRKQFRAISTMSLQGLPPLPKSL 435
+DDD + + LK R + Q ++ + PL K L
Sbjct: 136 IDDDIDEIEKAAAELKLKYREQDQVEHVAGVEESATIPLDKEL 178
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 308 NKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEMLIYELQTMRSQS-DVPQSFETK 366
NK + + + +++EN KE E + QL K+ + L+Y + +RS++ ++ E +
Sbjct: 15 NKQTSLVLQNLKEETENQLKELEKKRSQLHKEEQINLQLVYAINDLRSKTKELKAENEKE 74
Query: 367 DIERNGHCDSEDSEQN 382
D N S D N
Sbjct: 75 DTFLNSFNASGDLTAN 90
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 286 LERKTSQVTEMLISEILASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEM 345
L R+T + S+++ +R +E V+ K S+ I +E ++ L + NN+E+
Sbjct: 120 LRRRTLLLPPKFTSKVIKNRAKANEEDTEVLKK-VTSQKILEETIKRELLLKETKNNNEL 178
Query: 346 L 346
L
Sbjct: 179 L 179
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 244 VEEVQEFDDRLRNSPSRQIDNIADHKDLR 272
+E V+ FD+ LRN S ID + HKDL+
Sbjct: 71 LEYVEPFDEALRNVVSTLIDPVV-HKDLK 98
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/96 (17%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 303 ASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEMLIYELQTMRSQSDVPQS 362
+S + ++ ++ +SE+ + E+ES + + E+++ + S S+ S
Sbjct: 84 SSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSS 143
Query: 363 FETKDIERNGHCDSEDSEQNYAMSSVNSENVDDDYE 398
E+++ E E+ +++ + SS S + + + E
Sbjct: 144 SESEE-EEEAVVKIEEKKESSSDSSSESSSSESESE 178
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 206 KRPKVNTPTKESPEISLYASPIDAKPPRSPLSEAP 240
K PK +P S E+++++S PP SPL + P
Sbjct: 406 KFPK--SPLNSSQEVTIHSSQDRQSPPSSPLKDVP 438
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/45 (24%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 301 ILASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEM 345
++ S ++N D+AN +K S+ ++++N H + K++ H++
Sbjct: 71 VIPSTSSNADDANKEPEKQSTSDYVSRKNR-HMQLIKKNILEHDL 114
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.5 bits (58), Expect = 4.4
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 10/136 (7%)
Query: 211 NTPTKESPEISLYASPIDAKPPRSPLSEAPYASVEEVQEFDDRLRNSPSRQIDNIADHKD 270
N TK I S +D+ + +S P++ + N+ + ID I D D
Sbjct: 119 NNKTKALSIIQKLLSTVDSST--NSVSRDPFSVLSIDDSALTEKLNTINLDIDKILDELD 176
Query: 271 LRIVXXXXXXXXXXSLERKTSQVTEMLISEILASRNNNKDEANTVIDKGKDSE----NIT 326
L ++S T I+E + ++ E T KGKD E +
Sbjct: 177 ----TTRSQLHSIIKLPDRSSSFTLQCINESVRPQSTKVKEEATTSSKGKDEEKKVSTVE 232
Query: 327 KENESHQMQLMKDMNN 342
+ + Q+ ++D N
Sbjct: 233 QRTQLQQLSRLQDQQN 248
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 27.5 bits (58), Expect = 4.4
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 288 RKTSQVT-EMLISEILASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMN--NHE 344
R+T T + ++ ++L N K + D+ D E + + S +MQ + +
Sbjct: 152 RRTIATTCKGVLEDVLKKDNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSRYRGSP 211
Query: 345 MLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDDD 396
E Q+ S+SD + + G D ED E + S +S + D+D
Sbjct: 212 KPNIEKQSCSSESDRVSQISDDEEDEEGSADEEDEEDSDVELSESSLSDDED 263
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 27.5 bits (58), Expect = 4.4
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 304 SRNNNKDEANTVIDKGKD-------SENITKENESHQMQLMKDMNNHEMLIYELQTMRSQ 356
S + N D+AN+V+ KD S + T+ ++S ++++D+ + + L Y L+ ++
Sbjct: 509 SASYNTDDANSVVSPSKDGISTTTVSSDATRSSQSSHFRIIEDLPDSK-LKYSLED-QAT 566
Query: 357 SDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDDDYEH 399
D + + + G + + Y + + V D H
Sbjct: 567 YDQSSRYPGRHFGKTGRSHFPRAPEYYGENDFEEDEVYRDDRH 609
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 27.1 bits (57), Expect = 5.8
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 307 NNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEMLIYELQTMRSQSDVPQSFETK 366
N D ++T ++ + ENI N+S ++L D E S+S P++
Sbjct: 112 NETDSSSTSVED-VNKENILSLNDSCLIKLSDD---------EASNKSSRSSTPRNSIKS 161
Query: 367 DIERNGHCDSEDSEQNYAMSSVNSENVDDD 396
+ GH D ++N A S NS+ ++D
Sbjct: 162 NSSNQGHGDIPIPKKNPARSVCNSKLFNED 191
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.1 bits (57), Expect = 5.8
Identities = 24/133 (18%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 237 SEAPYASVEEVQEFDDRLRNSPSRQIDNIADHKDLRIVXXXXXXXXXXSLERKTSQVTEM 296
S++ SV+ +E +RL +S ++ D+ + ++ S E S+ +E+
Sbjct: 10 SDSDAESVDSSEE--NRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEV 67
Query: 297 LISE---ILASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEMLIYELQTM 353
+ + + AS ++ D ++ ++ +SE ++ ++ + + + + E E ++
Sbjct: 68 EVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESD 127
Query: 354 RSQSDVPQSFETK 366
S+ P SF K
Sbjct: 128 ESERSGPSSFLKK 140
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 382 NYAMSSVNSENVDDDYEHAYAYIVDDDLKSRLRKQF 417
++ M ++NV++ YE +Y + D+ L KQ+
Sbjct: 870 SFVMKQSENDNVEESYEESYKFFCIDERYHFLEKQW 905
>SPAC1002.04c |taf11||transcription factor TFIID complex subunit
Taf11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 39 RKAVAESKANFTKSRSYSKQEHSNSGARSKTLERANTVQPTVSP 82
R A S F +S SY + +GA +K ANT P P
Sbjct: 3 RTGSASSVPRFQRSMSYDQSNSPTAGAHAK----ANTASPAAEP 42
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.121 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,734,595
Number of Sequences: 5004
Number of extensions: 63446
Number of successful extensions: 261
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 252
Number of HSP's gapped (non-prelim): 23
length of query: 479
length of database: 2,362,478
effective HSP length: 75
effective length of query: 404
effective length of database: 1,987,178
effective search space: 802819912
effective search space used: 802819912
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 56 (26.6 bits)
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