Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005183-TA|BGIBMGA005183-PA|undefined
(479 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 40 0.006
02_01_0166 + 1154695-1156569 36 0.094
04_04_0537 + 26079926-26079994,26080317-26080500,26081866-260839... 33 0.66
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 33 0.66
07_03_1244 + 25139159-25139252,25139839-25139924,25140103-251401... 32 1.2
05_03_0085 - 8271718-8272005,8272110-8272393,8273610-8274012,827... 32 1.2
12_02_1089 - 25987384-25987611,25988255-25988419,25988607-259886... 31 1.5
03_02_0773 + 11063556-11064077 31 1.5
03_02_0928 + 12464325-12464498,12466494-12466679,12466929-124670... 31 2.0
04_01_0310 + 4197835-4197875,4197994-4198924 30 3.5
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 30 3.5
06_03_1207 + 28418473-28421073 30 4.7
08_02_0202 - 14202996-14203241,14203630-14203823,14203947-142045... 29 6.2
08_01_0909 + 8958727-8958917,8959527-8959611,8960628-8960684,896... 29 6.2
03_05_0049 - 20277234-20277251,20277670-20277795,20278085-202781... 29 8.1
>01_01_1206 -
9702128-9702184,9702272-9702323,9702410-9702471,
9702578-9702665,9703027-9703095,9703224-9703281,
9703895-9703996,9704075-9704179,9704273-9704624,
9706005-9706100,9706427-9706501,9707192-9707370,
9707501-9707740,9707922-9708017,9708193-9708306,
9708428-9708527
Length = 614
Score = 39.5 bits (88), Expect = 0.006
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 343 HEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSEN----VDDDYE 398
H+M + +T +SDVP+S E D H + ED Y + E+ VDD E
Sbjct: 343 HDMPEHSEETHEDESDVPESAE--DSYAGYHSEVEDDRHKYDDEDFSHESDDEYVDDHDE 400
Query: 399 HAYAYIVDDDLKSRLRKQFRA 419
H +Y DDD K F A
Sbjct: 401 HVASYKSDDDQKGDDHSDFTA 421
>02_01_0166 + 1154695-1156569
Length = 624
Score = 35.5 bits (78), Expect = 0.094
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 345 MLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYA--MSSVNSENVDDDYEHAYA 402
ML +L RS+ DVP +F+T + GHC D E+ YA +S + + V DD E A
Sbjct: 361 MLFGQLLDRRSKVDVP-AFKTLIL---GHCREGDFEEGYALLLSMLKRDLVPDD-ECYIA 415
Query: 403 YIVDDDLKSRLRKQFRAISTMSLQGLPP 430
I + R++ + A+ M GL P
Sbjct: 416 VIEGFSQRGRMKFAWEALHRMLNSGLRP 443
>04_04_0537 +
26079926-26079994,26080317-26080500,26081866-26083910,
26084323-26084424,26084566-26084622
Length = 818
Score = 32.7 bits (71), Expect = 0.66
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 288 RKTSQVTEMLISEILASRNNNKDEANTVIDKGKDSE---NITK---ENE-SHQMQLMKDM 340
++ VTEM+ SE NN I+KG + N+ + EN ++ + +
Sbjct: 544 KEIKSVTEMVRSEKHIKEENNCSFPGE-IEKGLEQNIDFNVLRFPDENACTNNLGRFSMI 602
Query: 341 NNHEMLI-YELQTMRSQSDVPQSFETKDIERN-----GHCDSEDSEQNYAMSSVNSENVD 394
N E L ++QT + D + +E+ G+CD +DSE+NY ++ +++
Sbjct: 603 GNIEQLYTMKMQTSGASEDKCTDYYQVPLEKEILSSPGNCDRQDSEENYLLAEISTGK-- 660
Query: 395 DDYEHAYAYIVDDDLKSRLRKQFRAISTMSLQGLPP 430
D A+ V+ L+ + ++ T +PP
Sbjct: 661 DGVSDAWNGNVEQSLQQQDHRKLHVGDTALNLSIPP 696
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 32.7 bits (71), Expect = 0.66
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 300 EILASRNNNKDEANTVIDKGKDSENIT-----KE--NESHQMQLMKDMNNHEMLIYELQT 352
E+ AS N +E+ ++ +S+N KE N S Q + M++ N + Y +
Sbjct: 2224 EVDASMTKNIEESGACLEGADNSKNDVVDFRMKEGNNMSSQGETMEEKTNFMLEKYSV-- 2281
Query: 353 MRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDDDYEHAYA 402
S+ D+ +S + D+E E+ E+N S++ E + +EHAY+
Sbjct: 2282 --SEKDLKRSEKLNDVE-------EEQEENDKTSTLKEEKDHNTFEHAYS 2322
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 303 ASRNNNKDEANTVIDKGKDSENITKE---NESHQMQLMKDMNNHEMLIYELQTMRSQSDV 359
AS NN E++ +D D +N + E + M L M ++Q+ + D
Sbjct: 1730 ASLTNNVQESSASLDSADDEKNDIADCGMKERNTMSLQVGMMEENTNFIQVQSSGLEKDC 1789
Query: 360 PQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDDDYEHAYA 402
+ FE + +R E+ E+N +++ E + +EH Y+
Sbjct: 1790 TR-FEKLNDKR------EEEEKNEKTNTLKEEKDHNTFEHTYS 1825
>07_03_1244 +
25139159-25139252,25139839-25139924,25140103-25140156,
25140633-25140728,25140923-25140974,25141092-25141111
Length = 133
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 331 SHQMQLMKDMNN---HEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSS 387
SHQ ++K + +L + Q +RS + K E++G D E +
Sbjct: 44 SHQRMMIKRLKGILIGNVLSEDSQAVRSCVGIEAQDGDKKTEKDG-----DDEDEHEEEE 98
Query: 388 VNSENVDDDYEHAYAYIVDDD 408
V EN DDDY + DDD
Sbjct: 99 VEEENSDDDYNQNIEFDDDDD 119
>05_03_0085 -
8271718-8272005,8272110-8272393,8273610-8274012,
8274792-8274816,8275686-8276149
Length = 487
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 223 YASPIDAKPPRSPLSEAPYASVEEVQE-----FDDRLRNSPSRQIDNI 265
+ASP+D PP+S L E P+ EE+QE FD ++ S + DNI
Sbjct: 127 WASPVDKLPPQSNL-ETPHKEGEELQEGRGSYFDLQIMYSKLKSEDNI 173
>12_02_1089 -
25987384-25987611,25988255-25988419,25988607-25988678,
25989275-25989435,25989941-25989968
Length = 217
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 49 FTKSRSYSKQEHSNSGARSKT--LERANTVQPTVSPKQNGLARVK 91
F S+S K+EHS+S +R K + ++ QP+ SP G + K
Sbjct: 164 FLNSKSDDKEEHSDSSSRDKQDGVAPRDSGQPSTSPSSKGASSAK 208
>03_02_0773 + 11063556-11064077
Length = 173
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 358 DVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDDD 396
D+ +F+ D +R+G ED + YA + SE DD+
Sbjct: 20 DLRPAFDVLDADRDGRISREDLKSFYASGAATSERFDDE 58
>03_02_0928 +
12464325-12464498,12466494-12466679,12466929-12467021,
12467212-12467394,12467506-12467608,12467695-12467865,
12468086-12469084,12469178-12469254,12469485-12470337,
12470878-12471000,12471526-12471878
Length = 1104
Score = 31.1 bits (67), Expect = 2.0
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 243 SVEEVQEFDDRLRNSPSRQIDNIADHKDLRIVXXXXXXXXXXSLERKTSQVTEMLISEIL 302
SV+E R+S NI + D+ ++ + ER+ S V+ +E
Sbjct: 568 SVQEASSDCKVARDSFEIPAVNITSNSDV-VLPGLLSPSSTETDERRLSPVSSSHSTEDS 626
Query: 303 ASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDM----NNHEMLIYELQTMRSQSD 358
+ +++++ + + S++I+ +E+ Q L K M N ++ +++ +Q+
Sbjct: 627 SQQSHDESNWDNSVQLYDSSDDISNMHETDQHILQKHMVSLGQNKTLINRQVRVKSNQAS 686
Query: 359 VP------------QSFETKDIERNGHCDSEDSEQNYAMSS--VNSENVD 394
VP Q TKDI+ + H +DSE Y ++ ++S N D
Sbjct: 687 VPKGKFSICKEQITQDTATKDIKLSRHLRVKDSEHEYISTAKKISSYNCD 736
>04_01_0310 + 4197835-4197875,4197994-4198924
Length = 323
Score = 30.3 bits (65), Expect = 3.5
Identities = 10/35 (28%), Positives = 24/35 (68%)
Query: 323 ENITKENESHQMQLMKDMNNHEMLIYELQTMRSQS 357
E K ++S ++++MK++ +H M + E+QT ++ +
Sbjct: 251 EAAAKASDSEKVEIMKELEDHNMKVEEIQTNKNMT 285
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 287 ERKTSQVTEMLISEILASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEML 346
E+K + V L SEI R N + + K+ E +TKE +S QL +D+ + +
Sbjct: 1425 EKKLNDVEASLKSEIDRHRKININIKRKLDASAKEKEELTKEKQSLSKQL-EDLKSSQKT 1483
Query: 347 IYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSE 391
E Q+ + F + +E+ + +D+++ A N +
Sbjct: 1484 TTE--NSNEQAIKEKDFRIQTLEKVLEKERDDNKKEKAFRRRNEK 1526
>06_03_1207 + 28418473-28421073
Length = 866
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 336 LMKDMNNHEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDD 395
L+KD H+ + L M+ +P T G CD D + + + + +N
Sbjct: 382 LVKDKKLHKAMAL-LTKMQKDGIIPNVI-TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 439
Query: 396 DYEHAYAYIVD 406
EHAYA + D
Sbjct: 440 PDEHAYAVLTD 450
>08_02_0202 -
14202996-14203241,14203630-14203823,14203947-14204559,
14205422-14205535
Length = 388
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 320 KDSENITKENESHQMQLMKDMNNHEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDS 379
+D N+ + + +M D HEM+I + R + D+P + + RN H D
Sbjct: 14 QDYRNLDDSQKHFLLTMMGDFQ-HEMIIPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDK 72
Query: 380 EQ 381
Q
Sbjct: 73 TQ 74
>08_01_0909 +
8958727-8958917,8959527-8959611,8960628-8960684,
8961311-8961437,8961602-8961973,8962907-8962915,
8963196-8963327,8963404-8963609,8963697-8963756
Length = 412
Score = 29.5 bits (63), Expect = 6.2
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 5/136 (3%)
Query: 336 LMKDMNNHEMLIYELQTMRSQSDVPQSFETKDIERNGHCDSEDSEQNYAMSSVNSENVDD 395
+ K E L + M+++ +S +TK + N C SE+ Y+MS+ +E + +
Sbjct: 246 MAKQACGFENLGFTSVDMKNKLYSKRSLQTK--QENKACRVAKSEETYSMSTNCAEKLAE 303
Query: 396 DYEHAYAYIVDDDLKSRLRKQF---RAISTMSLQGLPPLPKSLSGFAEXXXXXXXXXXXS 452
D E+ D DL S Q I +G+ K + G A
Sbjct: 304 DIENFLKIRGDPDLDSSPSPQVAKGNQIMASKPKGIELKRKEICGSARPIGGLEKSSQNG 363
Query: 453 NEKPPTDLDSQLVYLK 468
+K D +++V L+
Sbjct: 364 KKKKNDDSPAEVVELQ 379
>03_05_0049 -
20277234-20277251,20277670-20277795,20278085-20278153,
20278233-20278280,20278413-20278494,20278583-20278662,
20278764-20278835,20278912-20279006,20280396-20280477,
20280604-20280963
Length = 343
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 141 KAVKTCRQILVRSLSTSNKLDQQDAKCKVTKSSSFAEK 178
KA+ Q+LV +L TS+KL D KV ++ F E+
Sbjct: 160 KAMGVTNQLLVNALRTSSKLVVSDDGKKVRRAQPFTER 197
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.307 0.121 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,026,090
Number of Sequences: 37544
Number of extensions: 340731
Number of successful extensions: 1014
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1005
Number of HSP's gapped (non-prelim): 20
length of query: 479
length of database: 14,793,348
effective HSP length: 85
effective length of query: 394
effective length of database: 11,602,108
effective search space: 4571230552
effective search space used: 4571230552
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 62 (29.1 bits)
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