GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005182-TA|BGIBMGA005182-PA|IPR003337|Trehalose-
phosphatase, IPR006379|HAD-superfamily hydrolase, subfamily IIB,
IPR001830|Glycosyl transferase, family 20
         (733 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK095241-1|BAC04506.1|  956|Homo sapiens protein ( Homo sapiens ...    34   1.6  
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.            34   1.6  
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.               34   1.6  
BC082270-1|AAH82270.1|  588|Homo sapiens YEATS2 protein protein.       32   8.4  
AY312370-1|AAQ85138.1|   74|Homo sapiens AAA1 variant VI protein.      32   8.4  
AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein.     32   8.4  

>AK095241-1|BAC04506.1|  956|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37922 fis, clone CTONG1000277. ).
          Length = 956

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 5/136 (3%)

Query: 387 LNDVDSWMKAFLKAMDS-LEEEADDLGATTMQPVTIDDFDEYLSKYIGYTQKLALLLDYD 445
           L+  ++W++   + MD  L    D   A T+    +  F   + ++  ++  L    + D
Sbjct: 392 LHQTEAWLQEVEELMDEDLSASQDHSQAVTLIQEKMTLFKSLMDRFEHHSNILLTFENKD 451

Query: 446 GTLAPIAPHPDLATLPLETKHTLQR---LSNMSDVYIAIISGRNVDNVKQMVGIEGITYA 502
               P+ P   L  +     + L++   L      Y  ++ G  VD VK  + I  I Y 
Sbjct: 452 ENHLPLVPPNKLEEMKRRINNILEKKFILLLEFHYYKCLVLGL-VDEVKSKLDIWNIKYG 510

Query: 503 GNHGLEILHPDGSKFV 518
               +E+L  D  KF+
Sbjct: 511 SRESVELLLEDWHKFI 526


>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
          Length = 6884

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 5/136 (3%)

Query: 387 LNDVDSWMKAFLKAMDS-LEEEADDLGATTMQPVTIDDFDEYLSKYIGYTQKLALLLDYD 445
           L+  ++W++   + MD  L    D   A T+    +  F   + ++  ++  L    + D
Sbjct: 392 LHQTEAWLQEVEELMDEDLSASQDHSQAVTLIQEKMTLFKSLMDRFEHHSNILLTFENKD 451

Query: 446 GTLAPIAPHPDLATLPLETKHTLQR---LSNMSDVYIAIISGRNVDNVKQMVGIEGITYA 502
               P+ P   L  +     + L++   L      Y  ++ G  VD VK  + I  I Y 
Sbjct: 452 ENHLPLVPPNKLEEMKRRINNILEKKFILLLEFHYYKCLVLGL-VDEVKSKLDIWNIKYG 510

Query: 503 GNHGLEILHPDGSKFV 518
               +E+L  D  KF+
Sbjct: 511 SRESVELLLEDWHKFI 526


>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
          Length = 6885

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 5/136 (3%)

Query: 387 LNDVDSWMKAFLKAMDS-LEEEADDLGATTMQPVTIDDFDEYLSKYIGYTQKLALLLDYD 445
           L+  ++W++   + MD  L    D   A T+    +  F   + ++  ++  L    + D
Sbjct: 392 LHQTEAWLQEVEELMDEDLSASQDHSQAVTLIQEKMTLFKSLMDRFEHHSNILLTFENKD 451

Query: 446 GTLAPIAPHPDLATLPLETKHTLQR---LSNMSDVYIAIISGRNVDNVKQMVGIEGITYA 502
               P+ P   L  +     + L++   L      Y  ++ G  VD VK  + I  I Y 
Sbjct: 452 ENHLPLVPPNKLEEMKRRINNILEKKFILLLEFHYYKCLVLGL-VDEVKSKLDIWNIKYG 510

Query: 503 GNHGLEILHPDGSKFV 518
               +E+L  D  KF+
Sbjct: 511 SRESVELLLEDWHKFI 526


>BC082270-1|AAH82270.1|  588|Homo sapiens YEATS2 protein protein.
          Length = 588

 Score = 31.9 bits (69), Expect = 8.4
 Identities = 13/44 (29%), Positives = 29/44 (65%)

Query: 220 LVHRLKAFERLLEKHPEHIEKVVLLQISVPSRTDVKEYQDLKEE 263
           L  +L+  ++  ++ PE+ E+V +L +S P + ++K+ Q+ K+E
Sbjct: 439 LCRKLEDLQQFQKREPENEEEVDILSLSEPVKINIKKEQEEKQE 482


>AY312370-1|AAQ85138.1|   74|Homo sapiens AAA1 variant VI protein.
          Length = 74

 Score = 31.9 bits (69), Expect = 8.4
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 33 MPDRATFIADHWKAYIKIN--EEFAEKTVHALHLLNKQKKD 71
          M +R   + D+WKAY++ N   +F+   +HA   L ++K+D
Sbjct: 6  MLERLKTLGDYWKAYVRRNAGRQFSHCNLHAHQFLVRRKQD 46


>AB033023-1|BAA86511.1| 1487|Homo sapiens KIAA1197 protein protein.
          Length = 1487

 Score = 31.9 bits (69), Expect = 8.4
 Identities = 13/44 (29%), Positives = 29/44 (65%)

Query: 220  LVHRLKAFERLLEKHPEHIEKVVLLQISVPSRTDVKEYQDLKEE 263
            L  +L+  ++  ++ PE+ E+V +L +S P + ++K+ Q+ K+E
Sbjct: 1338 LCRKLEDLQQFQKREPENEEEVDILSLSEPVKINIKKEQEEKQE 1381


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.137    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,901,444
Number of Sequences: 224733
Number of extensions: 4889729
Number of successful extensions: 13354
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 13352
Number of HSP's gapped (non-prelim): 6
length of query: 733
length of database: 73,234,838
effective HSP length: 95
effective length of query: 638
effective length of database: 51,885,203
effective search space: 33102759514
effective search space used: 33102759514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 69 (31.9 bits)