GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005179-TA|BGIBMGA005179-PA|IPR013818|Lipase, N-terminal,
IPR008262|Lipase, active site, IPR000734|Lipase
         (329 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   2.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 68  PENNEQIRSEYFDATKSLTLLTHGWLSSSDSEWLQYIKNSLLKRDDFN 115
           P++ E    EY     +L L  H  L S D+   +Y+ + +    D N
Sbjct: 201 PDSKECSNQEYEIMKDNLLLYNHARLMSQDNHSKEYLVSIMFSHYDRN 248


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 268 FYGESITSKISFNAYPCDSWRNYEKGE 294
           FYG  + S    N   CD ++N   GE
Sbjct: 26  FYGSIMFSMTQVNKEECDYYQNLNLGE 52


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,250
Number of Sequences: 429
Number of extensions: 4735
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 2
length of query: 329
length of database: 140,377
effective HSP length: 58
effective length of query: 271
effective length of database: 115,495
effective search space: 31299145
effective search space used: 31299145
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)