GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005175-TA|BGIBMGA005175-PA|undefined
         (50 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   1.2  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   3.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   3.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   3.7  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              19   4.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          18   8.5  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.0 bits (42), Expect = 1.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 3  AAVPPAENGGPRSELEQLQMRAGQVTDESLESTRRMMQL 41
          A+VP     GP  EL Q++    +   E ++S   ++ L
Sbjct: 19 ASVPKVVYDGPIYELRQIEEENIEPDTELMDSNEPLLPL 57


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.4 bits (38), Expect = 3.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 7   PAENGGPRSEL 17
           P  NGGPR+ L
Sbjct: 147 PGGNGGPRNGL 157


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.4 bits (38), Expect = 3.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 7   PAENGGPRSEL 17
           P  NGGPR+ L
Sbjct: 147 PGGNGGPRNGL 157


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 3.7
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 1    MPAAVPPAENGGPRSELEQLQMRAGQVTDESLESTRRMMQLC 42
            +   +P  +     +  +Q Q  + Q   ES+ S   + QLC
Sbjct: 1292 LETGIPRDQRAMTEARNQQQQASSQQQIPESMRSKALIDQLC 1333


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 19.0 bits (37), Expect = 4.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query: 27 VTDESLESTRRMMQLCEE 44
          V++ES+   R++  +C E
Sbjct: 18 VSEESINKLRKIESVCAE 35


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 18.2 bits (35), Expect = 8.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 6   PPAENGGPRSELEQLQ 21
           PP E G PR    +L+
Sbjct: 138 PPREPGTPRINFTKLK 153


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.128    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,891
Number of Sequences: 429
Number of extensions: 298
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 50
length of database: 140,377
effective HSP length: 30
effective length of query: 20
effective length of database: 127,507
effective search space:  2550140
effective search space used:  2550140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)
S2: 35 (18.2 bits)