Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005174-TA|BGIBMGA005174-PA|IPR001926|Pyridoxal-5'-
phosphate-dependent enzyme, beta subunit, IPR001216|Cysteine
synthase/cystathionine beta-synthase P-phosphate-binding site
(196 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X88562-1|CAA61252.1| 551|Homo sapiens cystathionine beta-syntha... 210 3e-54
X82166-1|CAA57656.1| 551|Homo sapiens cystathionine beta-syntha... 210 3e-54
L19501-1|AAA19874.1| 551|Homo sapiens cystathionine beta-syntha... 210 3e-54
L14577-1|AAA98524.1| 551|Homo sapiens cystathionine beta-syntha... 210 3e-54
BT007154-1|AAP35818.1| 551|Homo sapiens cystathionine-beta-synt... 210 3e-54
BC011381-1|AAH11381.1| 551|Homo sapiens CBS protein protein. 210 3e-54
BC010242-1|AAH10242.1| 551|Homo sapiens CBS protein protein. 210 3e-54
BC007257-1|AAH07257.1| 551|Homo sapiens CBS protein protein. 210 3e-54
AF042836-2|AAC64683.1| 551|Homo sapiens cystathionine beta-synt... 210 3e-54
AF042836-1|AAC64684.1| 565|Homo sapiens cystathionine beta-synt... 210 3e-54
BC000440-1|AAH00440.1| 551|Homo sapiens CBS protein protein. 208 1e-53
AL137314-1|CAB70691.1| 475|Homo sapiens hypothetical protein pr... 204 2e-52
CR457300-1|CAG33581.1| 340|Homo sapiens SRR protein. 47 5e-05
BC091479-1|AAH91479.1| 329|Homo sapiens SDSL protein protein. 47 5e-05
BC074728-1|AAH74728.1| 340|Homo sapiens serine racemase protein. 47 5e-05
BC009849-1|AAH09849.1| 329|Homo sapiens serine dehydratase-like... 47 5e-05
AY034081-1|AAK58495.1| 340|Homo sapiens serine racemase protein. 47 5e-05
AK223120-1|BAD96840.1| 340|Homo sapiens serine racemase variant... 47 5e-05
AK023169-1|BAB14442.1| 340|Homo sapiens protein ( Homo sapiens ... 47 5e-05
AF169974-1|AAG27081.1| 340|Homo sapiens serine racemase protein. 47 5e-05
AF134473-1|AAP97250.1| 329|Homo sapiens serine dehydratase-2 pr... 47 5e-05
CR456703-1|CAG32984.1| 373|Homo sapiens CGI-63 protein. 41 0.002
BC001419-1|AAH01419.1| 373|Homo sapiens mitochondrial trans-2-e... 41 0.002
AL590729-4|CAI14330.1| 373|Homo sapiens mitochondrial trans-2-e... 41 0.002
AL590729-3|CAI14329.1| 297|Homo sapiens mitochondrial trans-2-e... 41 0.002
AL590729-2|CAI14327.1| 189|Homo sapiens mitochondrial trans-2-e... 41 0.002
AF151821-1|AAD34058.1| 373|Homo sapiens CGI-63 protein protein. 41 0.002
AL834378-1|CAD39041.1| 288|Homo sapiens hypothetical protein pr... 33 0.65
D49835-1|BAA23165.1| 1656|Homo sapiens DNA-binding protein protein. 30 4.6
AL589644-1|CAI14574.1| 1723|Homo sapiens ras responsive element ... 30 4.6
AL355336-1|CAH73521.1| 1723|Homo sapiens ras responsive element ... 30 4.6
AL139095-6|CAI16450.1| 1723|Homo sapiens ras responsive element ... 30 4.6
AB019352-1|BAD32779.1| 1476|Homo sapiens Zinc-finger motif-Enhan... 30 4.6
AB019351-1|BAD32778.1| 1687|Homo sapiens zinc-finger motif-enhan... 30 4.6
AB019254-1|BAD32776.1| 1742|Homo sapiens zinc-finger motif-enhan... 30 4.6
>X88562-1|CAA61252.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>X82166-1|CAA57656.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>L19501-1|AAA19874.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>L14577-1|AAA98524.1| 551|Homo sapiens cystathionine beta-synthase
protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>BT007154-1|AAP35818.1| 551|Homo sapiens
cystathionine-beta-synthase protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>BC011381-1|AAH11381.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>BC010242-1|AAH10242.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>BC007257-1|AAH07257.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>AF042836-2|AAC64683.1| 551|Homo sapiens cystathionine
beta-synthase major isoform protein.
Length = 551
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>AF042836-1|AAC64684.1| 565|Homo sapiens cystathionine
beta-synthase minor isoform protein.
Length = 565
Score = 210 bits (512), Expect = 3e-54
Identities = 104/162 (64%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH A ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTAPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>BC000440-1|AAH00440.1| 551|Homo sapiens CBS protein protein.
Length = 551
Score = 208 bits (507), Expect = 1e-53
Identities = 103/162 (63%), Positives = 126/162 (77%), Gaps = 1/162 (0%)
Query: 23 DMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDR 82
+ PH ++ K+ DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDR
Sbjct: 62 ESPHHHTPPAKSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDR 121
Query: 83 IAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 142
I+ RM DAE+ G LKPG ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+
Sbjct: 122 ISLRMIEDAERDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV 180
Query: 143 LVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKEIPHAIILDQ 184
L LGAEI+RTPT A +DSPES++ VA RL EIP++ ILDQ
Sbjct: 181 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQ 222
>AL137314-1|CAB70691.1| 475|Homo sapiens hypothetical protein
protein.
Length = 475
Score = 204 bits (498), Expect = 2e-52
Identities = 100/145 (68%), Positives = 119/145 (82%), Gaps = 1/145 (0%)
Query: 40 DILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKP 99
DIL IG+TP+V+++K+ K GLKCE+ AKCEF N GGSVKDRI+ RM DAE+ G LKP
Sbjct: 3 DILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKP 62
Query: 100 GKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTPTEAAW 159
G ++I EPTSGNTGIGLALAAAVRGYRCIIV+PEKMS EKV+ L LGAEI+RTPT A +
Sbjct: 63 GDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARF 121
Query: 160 DSPESNIMVAHRLAKEIPHAIILDQ 184
DSPES++ VA RL EIP++ ILDQ
Sbjct: 122 DSPESHVGVAWRLKNEIPNSHILDQ 146
>CR457300-1|CAG33581.1| 340|Homo sapiens SRR protein.
Length = 340
Score = 46.8 bits (106), Expect = 5e-05
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 35 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 94
+K H +I + I TP++ S L + G ++ KCE GS K R A
Sbjct: 13 EKAHINIRDSIHLTPVLTSSILNQLTGRN--LFFKCELFQKTGSFKIRGALNAVRSLVPD 70
Query: 95 GILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTP 154
+ + K+V+ +SGN G L AA + G IV+P+ D K + GA I+
Sbjct: 71 ALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCE 129
Query: 155 TEAAWDSPESNIMVAHRLAKE 175
S ES VA R+ +E
Sbjct: 130 -----PSDESRENVAKRVTEE 145
>BC091479-1|AAH91479.1| 329|Homo sapiens SDSL protein protein.
Length = 329
Score = 46.8 bits (106), Expect = 5e-05
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 48 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVIVEP 107
TPL++ L + G+ ++ KCE + P GS K R + +KG +V
Sbjct: 18 TPLLESWALSQVAGMP--VFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRH-----LVCS 70
Query: 108 TSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTPTEAAWDSPESNIM 167
+ GN GI A AA G IVLPE S + V L GAE+ T WD E+N+
Sbjct: 71 SGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEV--QLTGKVWD--EANLR 126
Query: 168 VAHRLAK 174
A LAK
Sbjct: 127 -AQELAK 132
>BC074728-1|AAH74728.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 46.8 bits (106), Expect = 5e-05
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 35 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 94
+K H +I + I TP++ S L + G ++ KCE GS K R A
Sbjct: 13 EKAHINIRDSIHLTPVLTSSILNQLTGRN--LFFKCELFQKTGSFKIRGALNAVRSLVPD 70
Query: 95 GILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTP 154
+ + K+V+ +SGN G L AA + G IV+P+ D K + GA I+
Sbjct: 71 ALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCE 129
Query: 155 TEAAWDSPESNIMVAHRLAKE 175
S ES VA R+ +E
Sbjct: 130 -----PSDESRENVAKRVTEE 145
>BC009849-1|AAH09849.1| 329|Homo sapiens serine dehydratase-like
protein.
Length = 329
Score = 46.8 bits (106), Expect = 5e-05
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 48 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVIVEP 107
TPL++ L + G+ ++ KCE + P GS K R + +KG +V
Sbjct: 18 TPLLESWALSQVAGMP--VFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRH-----LVCS 70
Query: 108 TSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTPTEAAWDSPESNIM 167
+ GN GI A AA G IVLPE S + V L GAE+ T WD E+N+
Sbjct: 71 SGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEV--QLTGKVWD--EANLR 126
Query: 168 VAHRLAK 174
A LAK
Sbjct: 127 -AQELAK 132
>AY034081-1|AAK58495.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 46.8 bits (106), Expect = 5e-05
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 35 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 94
+K H +I + I TP++ S L + G ++ KCE GS K R A
Sbjct: 13 EKAHINIRDSIHLTPVLTSSILNQLTGRN--LFFKCELFQKTGSFKIRGALNAVRSLVPD 70
Query: 95 GILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTP 154
+ + K+V+ +SGN G L AA + G IV+P+ D K + GA I+
Sbjct: 71 ALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCE 129
Query: 155 TEAAWDSPESNIMVAHRLAKE 175
S ES VA R+ +E
Sbjct: 130 -----PSDESRENVAKRVTEE 145
>AK223120-1|BAD96840.1| 340|Homo sapiens serine racemase variant
protein.
Length = 340
Score = 46.8 bits (106), Expect = 5e-05
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 35 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 94
+K H +I + I TP++ S L + G ++ KCE GS K R A
Sbjct: 13 EKAHINIRDSIHLTPVLTSSILNQLTGRN--LFFKCELFQKTGSFKIRGALNAVRSLVPD 70
Query: 95 GILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTP 154
+ + K+V+ +SGN G L AA + G IV+P+ D K + GA I+
Sbjct: 71 ALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCE 129
Query: 155 TEAAWDSPESNIMVAHRLAKE 175
S ES VA R+ +E
Sbjct: 130 -----PSDESRENVAKRVTEE 145
>AK023169-1|BAB14442.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ13107 fis, clone NT2RP3002501, weakly similar to
THREONINE DEHYDRATASE CATABOLIC (EC 4.2.1.16). ).
Length = 340
Score = 46.8 bits (106), Expect = 5e-05
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 35 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 94
+K H +I + I TP++ S L + G ++ KCE GS K R A
Sbjct: 13 EKAHINIRDSIHLTPVLTSSILNQLTGRN--LFFKCELFQKTGSFKIRGALNAVRSLVPD 70
Query: 95 GILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTP 154
+ + K+V+ +SGN G L AA + G IV+P+ D K + GA I+
Sbjct: 71 ALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCE 129
Query: 155 TEAAWDSPESNIMVAHRLAKE 175
S ES VA R+ +E
Sbjct: 130 -----PSDESRENVAKRVTEE 145
>AF169974-1|AAG27081.1| 340|Homo sapiens serine racemase protein.
Length = 340
Score = 46.8 bits (106), Expect = 5e-05
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 35 QKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQK 94
+K H +I + I TP++ S L + G ++ KCE GS K R A
Sbjct: 13 EKAHINIRDSIHLTPVLTSSILNQLTGRN--LFFKCELFQKTGSFKIRGALNAVRSLVPD 70
Query: 95 GILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTP 154
+ + K+V+ +SGN G L AA + G IV+P+ D K + GA I+
Sbjct: 71 ALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCE 129
Query: 155 TEAAWDSPESNIMVAHRLAKE 175
S ES VA R+ +E
Sbjct: 130 -----PSDESRENVAKRVTEE 145
>AF134473-1|AAP97250.1| 329|Homo sapiens serine dehydratase-2
protein.
Length = 329
Score = 46.8 bits (106), Expect = 5e-05
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 48 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVIVEP 107
TPL++ L + G+ ++ KCE + P GS K R + +KG +V
Sbjct: 18 TPLLESWALSQVAGMP--VFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRH-----LVCS 70
Query: 108 TSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVTLGAEIIRTPTEAAWDSPESNIM 167
+ GN GI A AA G IVLPE S + V L GAE+ T WD E+N+
Sbjct: 71 SGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEV--QLTGKVWD--EANLR 126
Query: 168 VAHRLAK 174
A LAK
Sbjct: 127 -AQELAK 132
>CR456703-1|CAG32984.1| 373|Homo sapiens CGI-63 protein.
Length = 373
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 84 AYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKV-NT 142
AYRM +D EQ L+PG SVI ++ G + AA G R I V+ ++ +K+ +
Sbjct: 171 AYRMLMDFEQ---LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDR 227
Query: 143 LVTLGAEIIRTPTE 156
L +LGAE + T E
Sbjct: 228 LKSLGAEHVITEEE 241
>BC001419-1|AAH01419.1| 373|Homo sapiens mitochondrial
trans-2-enoyl-CoA reductase protein.
Length = 373
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 84 AYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKV-NT 142
AYRM +D EQ L+PG SVI ++ G + AA G R I V+ ++ +K+ +
Sbjct: 171 AYRMLMDFEQ---LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDR 227
Query: 143 LVTLGAEIIRTPTE 156
L +LGAE + T E
Sbjct: 228 LKSLGAEHVITEEE 241
>AL590729-4|CAI14330.1| 373|Homo sapiens mitochondrial
trans-2-enoyl-CoA reductase protein.
Length = 373
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 84 AYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKV-NT 142
AYRM +D EQ L+PG SVI ++ G + AA G R I V+ ++ +K+ +
Sbjct: 171 AYRMLMDFEQ---LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDR 227
Query: 143 LVTLGAEIIRTPTE 156
L +LGAE + T E
Sbjct: 228 LKSLGAEHVITEEE 241
>AL590729-3|CAI14329.1| 297|Homo sapiens mitochondrial
trans-2-enoyl-CoA reductase protein.
Length = 297
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 84 AYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKV-NT 142
AYRM +D EQ L+PG SVI ++ G + AA G R I V+ ++ +K+ +
Sbjct: 95 AYRMLMDFEQ---LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDR 151
Query: 143 LVTLGAEIIRTPTE 156
L +LGAE + T E
Sbjct: 152 LKSLGAEHVITEEE 165
>AL590729-2|CAI14327.1| 189|Homo sapiens mitochondrial
trans-2-enoyl-CoA reductase protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 84 AYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKV-NT 142
AYRM +D EQ L+PG SVI ++ G + AA G R I V+ ++ +K+ +
Sbjct: 10 AYRMLMDFEQ---LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDR 66
Query: 143 LVTLGAEIIRTPTE 156
L +LGAE + T E
Sbjct: 67 LKSLGAEHVITEEE 80
>AF151821-1|AAD34058.1| 373|Homo sapiens CGI-63 protein protein.
Length = 373
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 84 AYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKV-NT 142
AYRM +D EQ L+PG SVI ++ G + AA G R I V+ ++ +K+ +
Sbjct: 171 AYRMLMDFEQ---LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDR 227
Query: 143 LVTLGAEIIRTPTE 156
L +LGAE + T E
Sbjct: 228 LKSLGAEHVITEEE 241
>AL834378-1|CAD39041.1| 288|Homo sapiens hypothetical protein
protein.
Length = 288
Score = 33.1 bits (72), Expect = 0.65
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 77 GSVKDRIAYRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMS 136
GS K R A + + K+V+ +SGN G L AA + G IV+P+
Sbjct: 1 GSFKIRGALNAVRSLVPDALERKPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAP 59
Query: 137 DEKVNTLVTLGAEIIRTPTEAAWDSPESNIMVAHRLAKE 175
D K + GA I+ S ES VA R+ +E
Sbjct: 60 DCKKLAIQAYGASIVYCE-----PSDESRENVAKRVTEE 93
>D49835-1|BAA23165.1| 1656|Homo sapiens DNA-binding protein protein.
Length = 1656
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 78 SVKDRIAYRMFLDAEQKG-ILKPGKSVIVEPTSGNTGIGLA 117
+ KD I + + L QKG I++P S++V+P SG + I LA
Sbjct: 410 ATKDSIKH-LSLQPFQKGFIIQPDSSIVVKPISGESAIELA 449
>AL589644-1|CAI14574.1| 1723|Homo sapiens ras responsive element
binding protein 1 protein.
Length = 1723
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 78 SVKDRIAYRMFLDAEQKG-ILKPGKSVIVEPTSGNTGIGLA 117
+ KD I + + L QKG I++P S++V+P SG + I LA
Sbjct: 410 ATKDSIKH-LSLQPFQKGFIIQPDSSIVVKPISGESAIELA 449
>AL355336-1|CAH73521.1| 1723|Homo sapiens ras responsive element
binding protein 1 protein.
Length = 1723
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 78 SVKDRIAYRMFLDAEQKG-ILKPGKSVIVEPTSGNTGIGLA 117
+ KD I + + L QKG I++P S++V+P SG + I LA
Sbjct: 410 ATKDSIKH-LSLQPFQKGFIIQPDSSIVVKPISGESAIELA 449
>AL139095-6|CAI16450.1| 1723|Homo sapiens ras responsive element
binding protein 1 protein.
Length = 1723
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 78 SVKDRIAYRMFLDAEQKG-ILKPGKSVIVEPTSGNTGIGLA 117
+ KD I + + L QKG I++P S++V+P SG + I LA
Sbjct: 410 ATKDSIKH-LSLQPFQKGFIIQPDSSIVVKPISGESAIELA 449
>AB019352-1|BAD32779.1| 1476|Homo sapiens Zinc-finger motif-Enhancer
binding-Protein-1 gamma protein.
Length = 1476
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 78 SVKDRIAYRMFLDAEQKG-ILKPGKSVIVEPTSGNTGIGLA 117
+ KD I + + L QKG I++P S++V+P SG + I LA
Sbjct: 429 ATKDSIKH-LSLQPFQKGFIIQPDSSIVVKPISGESAIELA 468
>AB019351-1|BAD32778.1| 1687|Homo sapiens zinc-finger motif-enhancer
binding-protein-1 beta protein.
Length = 1687
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 78 SVKDRIAYRMFLDAEQKG-ILKPGKSVIVEPTSGNTGIGLA 117
+ KD I + + L QKG I++P S++V+P SG + I LA
Sbjct: 429 ATKDSIKH-LSLQPFQKGFIIQPDSSIVVKPISGESAIELA 468
>AB019254-1|BAD32776.1| 1742|Homo sapiens zinc-finger motif-enhancer
binding-protein-1 protein.
Length = 1742
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 78 SVKDRIAYRMFLDAEQKG-ILKPGKSVIVEPTSGNTGIGLA 117
+ KD I + + L QKG I++P S++V+P SG + I LA
Sbjct: 429 ATKDSIKH-LSLQPFQKGFIIQPDSSIVVKPISGESAIELA 468
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.135 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,548,036
Number of Sequences: 224733
Number of extensions: 1124604
Number of successful extensions: 2183
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2134
Number of HSP's gapped (non-prelim): 47
length of query: 196
length of database: 73,234,838
effective HSP length: 86
effective length of query: 110
effective length of database: 53,907,800
effective search space: 5929858000
effective search space used: 5929858000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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