GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005172-TA|BGIBMGA005172-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap, IPR001314|Peptidase S1A, chymotrypsin
         (225 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    65   6e-13
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 64.9 bits (151), Expect = 6e-13
 Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 70  IDDIALIRLKEPADFDLDNIKAICLPITPELQREPLVDNFGVVAGWGVTE-EGLQSPVLL 128
           I+DIAL++ ++   F  D +   CLP    L  +    +   V GWG T   G+ S +L 
Sbjct: 255 INDIALLKTEKDIKFG-DKVGPACLPFQHFL--DSFAGSDVTVLGWGHTSFNGMLSHILQ 311

Query: 129 SVQLPILSKEKCLQDYSQYSLKINDKQLCAGGLHDKDSCAGDSGGPLLYPGKVGSTGVRY 188
              L +L++ +C + Y   ++ +N   +CA     KD+C  DSGGP+L+         R 
Sbjct: 312 KTTLNMLTQVECYKYYG--NIMVN--AMCAYA-KGKDACQMDSGGPVLWQ---NPRTKRL 363

Query: 189 VQRGIVSFGSKRCGISLPGVYTNVAYYMDWILN 221
           V  GI+S+G++ CG   P   T V  Y+DWI++
Sbjct: 364 VNIGIISWGAE-CG-KYPNGNTKVGSYIDWIVS 394



 Score = 25.4 bits (53), Expect = 0.44
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 15  NCGTIESDRIFGGNRTRLFEMPWM 38
           NCG     RI GG  T + E P M
Sbjct: 152 NCGWKNPSRIVGGTNTGINEFPMM 175


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 163 DKDSCAGDSGGPLLYPGKVGST 184
           D  +   D GGPL    KV +T
Sbjct: 436 DMSNMQSDDGGPLSLKNKVETT 457


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)

Query: 144  YSQYSLKINDKQLCAGGLHDKDSCAGDSGGPLLYPGKVGSTGVRYV 189
            ++ +S + +D   CA       S  G  G P  + G  GS G R V
Sbjct: 1800 HNVFSPEYDDPANCAPEEDQYGSQYGQYGAPYDHYGSRGSVGRRSV 1845


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 57  EVIPHTGYTPQTLIDDIALIR 77
           +V+PH  Y+P     D  L R
Sbjct: 265 DVLPHPPYSPDLAPSDYFLFR 285


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.140    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,049
Number of Sequences: 429
Number of extensions: 2770
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 225
length of database: 140,377
effective HSP length: 55
effective length of query: 170
effective length of database: 116,782
effective search space: 19852940
effective search space used: 19852940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)