GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005170-TA|BGIBMGA005170-PA|IPR002110|Ankyrin,
IPR005821|Ion transport
         (746 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    28   0.32 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   3.0  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    24   5.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   9.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 125 CLVGSEECVKLLLDHGAHPNTWDSSTETKATPLH 158
           C++  E   KL +  G H   W S TET AT LH
Sbjct: 204 CII-DENTTKLAIVVGEHD--WSSKTETNATVLH 234


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 482 LELMMIIGRFPTFGLYVQMFTTVTVNFATFLLAYSCLLIAFG 523
           LEL+ +   FP   +  ++ + +T+N  T +LA S  +I  G
Sbjct: 30  LELINLENFFPEENVVEELLSPLTLNRITHILANSPAIIILG 71


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 544 KTVMMMSGELEYEDIFYNNCTNSEIYY 570
           K +  +S    Y + +YNN    ++YY
Sbjct: 302 KIISSLSNSCNYSNNYYNNNNYKKLYY 328


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 338 LLLSAGADPNAADNFGYTP 356
           L ++AG DP +  N GY P
Sbjct: 537 LRMTAGIDPKSIFNSGYRP 555


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,441
Number of Sequences: 429
Number of extensions: 8271
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 4
length of query: 746
length of database: 140,377
effective HSP length: 63
effective length of query: 683
effective length of database: 113,350
effective search space: 77418050
effective search space used: 77418050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)