GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005166-TA|BGIBMGA005166-PA|undefined
         (678 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    33   1.7  
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro...    31   3.9  
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P...    31   3.9  

>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 621 RVLDERALDSITDCVFTPQAETKDKSDVSQHSIGGFLSRYKYRLRCRRAHRHNII 675
           +VL  RA+ +ITDC +  +  T  + D++ H++   +SR+  R   R    H+I+
Sbjct: 828 QVLQNRAMRAITDCPYYVRGTTLHR-DLNLHTVEEQISRHTSRYSDRLRRHHSIL 881


>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p
           protein.
          Length = 2201

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 75  KLENPSKDLEVPVKYTNGDVKKEKE-EIVTNGHYTHISKQTATDIKTTNTKALKTKQVKE 133
           K E P  + EV VK    + +KEK+ + ++N   +  + +  T   TT+T ++ +  VK+
Sbjct: 191 KEEKPPSEKEVKVKSKEKEKEKEKDVDPLSNAQQSEPAAKHTTSTSTTSTTSITS--VKK 248

Query: 134 PIRRESTTSINQGSG 148
             +R+  T +   +G
Sbjct: 249 QAKRKIATPMPSSAG 263


>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
           isoform A protein.
          Length = 2529

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 75  KLENPSKDLEVPVKYTNGDVKKEKE-EIVTNGHYTHISKQTATDIKTTNTKALKTKQVKE 133
           K E P  + EV VK    + +KEK+ + ++N   +  + +  T   TT+T ++ +  VK+
Sbjct: 519 KEEKPPSEKEVKVKSKEKEKEKEKDVDPLSNAQQSEPAAKHTTSTSTTSTTSITS--VKK 576

Query: 134 PIRRESTTSINQGSG 148
             +R+  T +   +G
Sbjct: 577 QAKRKIATPMPSSAG 591


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.132    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,733,030
Number of Sequences: 52641
Number of extensions: 936320
Number of successful extensions: 2802
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2802
Number of HSP's gapped (non-prelim): 3
length of query: 678
length of database: 24,830,863
effective HSP length: 90
effective length of query: 588
effective length of database: 20,093,173
effective search space: 11814785724
effective search space used: 11814785724
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)