GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005165-TA|BGIBMGA005165-PA|undefined
         (345 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   1.3  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    24   1.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   9.0  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   9.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   9.0  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 111 FEQIWAANDYAMFVKMMTHKNVEL-QLQALELIERRYGTMPSIFMSETEKLETSETNENE 169
           F  +W A+    F+++     + L +L  LE++E     +P   +   + L+T    EN 
Sbjct: 126 FNSVWGAS---RFLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLTENR 182

Query: 170 EWPDND 175
               ND
Sbjct: 183 LRDIND 188


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 186 IGEIEDDKEEALNVTPEVVVTQKQTLLSKLNSFD 219
           IGE  +++E     T EVV  Q + + +K+NS+D
Sbjct: 126 IGEKLEEREAGK--TDEVVFRQTKAIANKINSWD 157


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 69  LVDVMLGSFMDDIGITAEQFEAACKLS 95
           L D+ L     D+ + +EQFEA  KL+
Sbjct: 330 LSDIPLHDATRDLVLMSEQFEADYKLT 356


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 3/43 (6%)

Query: 240 PVESTITPSTKVEVSDEELRARQEYLKQQRDKLLALKKQVREK 282
           P+E     S K+  S   +  RQEY   +  KL  L K +  K
Sbjct: 66  PIEPLAVDSVKIGESQGSVTLRQEY---KNIKLYGLTKNLEIK 105


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 69  LVDVMLGSFMDDIGITAEQFEAACKLS 95
           L D+ L     D+ + +EQFEA  KL+
Sbjct: 330 LSDIPLHDATRDLVLMSEQFEADYKLT 356


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.131    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,344
Number of Sequences: 429
Number of extensions: 4198
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 345
length of database: 140,377
effective HSP length: 58
effective length of query: 287
effective length of database: 115,495
effective search space: 33147065
effective search space used: 33147065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 44 (21.8 bits)