Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005163-TA|BGIBMGA005163-PA|undefined
(139 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101823-1|AAI01824.1| 473|Homo sapiens bestrophin 4 protein. 32 0.58
AY515707-1|AAR99657.1| 473|Homo sapiens bestrophin 4 protein. 32 0.58
AL592166-10|CAI13005.1| 473|Homo sapiens vitelliform macular dy... 32 0.58
AF440757-1|AAM76996.1| 473|Homo sapiens vitelliform macular dys... 32 0.58
BC022957-1|AAH22957.3| 460|Homo sapiens chromosome 9 open readi... 31 1.0
AL159167-1|CAI40281.1| 500|Homo sapiens chromosome 9 open readi... 31 1.0
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 31 1.4
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 31 1.4
AK000713-1|BAA91337.1| 551|Homo sapiens protein ( Homo sapiens ... 30 3.1
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 29 4.1
M97935-1|AAB64012.1| 750|Homo sapiens transcription factor ISGF... 29 4.1
BT007241-1|AAP35905.1| 712|Homo sapiens signal transducer and a... 29 4.1
BC002704-1|AAH02704.1| 712|Homo sapiens signal transducer and a... 29 4.1
AY865620-1|AAW56072.1| 750|Homo sapiens signal transducer and a... 29 4.1
AY462870-1|AAS58864.1| 452|Homo sapiens POTE8B protein. 29 4.1
AC067945-2|AAY24183.1| 750|Homo sapiens unknown protein. 29 4.1
AY462869-1|AAS58863.1| 498|Homo sapiens POTE8A protein. 29 5.4
BC101474-1|AAI01475.1| 1249|Homo sapiens BRCA1 interacting prote... 29 7.2
BC101472-1|AAI01473.1| 1249|Homo sapiens BRCA1 interacting prote... 29 7.2
AK127558-1|BAC87034.1| 492|Homo sapiens protein ( Homo sapiens ... 29 7.2
AF360549-1|AAK38111.1| 1249|Homo sapiens BRCA1-binding helicase-... 29 7.2
>BC101823-1|AAI01824.1| 473|Homo sapiens bestrophin 4 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 37 QKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHPSFTVASIIASAS 96
+ +D F+ N++ D + ++S D ++ + KD Y + D P P +TVA+ S
Sbjct: 315 EDDDDFETNQLIDRNLQVSLLSVDEMYQNLPPAEKDQYWDE--DQPQPPYTVATAAESLR 372
Query: 97 QK-MGSV-NLKYNDRIEQ 112
+GS NL+ +D EQ
Sbjct: 373 PSFLGSTFNLRMSDDPEQ 390
>AY515707-1|AAR99657.1| 473|Homo sapiens bestrophin 4 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 37 QKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHPSFTVASIIASAS 96
+ +D F+ N++ D + ++S D ++ + KD Y + D P P +TVA+ S
Sbjct: 315 EDDDDFETNQLIDRNLQVSLLSVDEMYQNLPPAEKDQYWDE--DQPQPPYTVATAAESLR 372
Query: 97 QK-MGSV-NLKYNDRIEQ 112
+GS NL+ +D EQ
Sbjct: 373 PSFLGSTFNLRMSDDPEQ 390
>AL592166-10|CAI13005.1| 473|Homo sapiens vitelliform macular
dystrophy 2-like 2 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 37 QKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHPSFTVASIIASAS 96
+ +D F+ N++ D + ++S D ++ + KD Y + D P P +TVA+ S
Sbjct: 315 EDDDDFETNQLIDRNLQVSLLSVDEMYQNLPPAEKDQYWDE--DQPQPPYTVATAAESLR 372
Query: 97 QK-MGSV-NLKYNDRIEQ 112
+GS NL+ +D EQ
Sbjct: 373 PSFLGSTFNLRMSDDPEQ 390
>AF440757-1|AAM76996.1| 473|Homo sapiens vitelliform macular
dystrophy 2-like protein 2 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 37 QKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHPSFTVASIIASAS 96
+ +D F+ N++ D + ++S D ++ + KD Y + D P P +TVA+ S
Sbjct: 315 EDDDDFETNQLIDRNLQVSLLSVDEMYQNLPPAEKDQYWDE--DQPQPPYTVATAAESLR 372
Query: 97 QK-MGSV-NLKYNDRIEQ 112
+GS NL+ +D EQ
Sbjct: 373 PSFLGSTFNLRMSDDPEQ 390
>BC022957-1|AAH22957.3| 460|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 460
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 35 RKQKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHPSFTVASIIAS 94
RKQ E+ + ++ E + I + T ++ Q+ L+D+Y SQ P++ S +
Sbjct: 135 RKQFEEMASYFNSSSVN-EFAKHITNATSEERQKMLRDFYASQYPEVKEFFVDSVSQFNN 193
Query: 95 ASQKMGSVNL-KYNDRIEQGNVSKNTDMEFVPQRRSTLK 132
+S + G K +D+ E + +D E + + ST K
Sbjct: 194 SSFEKGEQRTRKKSDKRESLIKPRLSDSETLSFKDSTNK 232
>AL159167-1|CAI40281.1| 500|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 500
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 35 RKQKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHPSFTVASIIAS 94
RKQ E+ + ++ E + I + T ++ Q+ L+D+Y SQ P++ S +
Sbjct: 175 RKQFEEMASYFNSSSVN-EFAKHITNATSEERQKMLRDFYASQYPEVKEFFVDSVSQFNN 233
Query: 95 ASQKMGSVNL-KYNDRIEQGNVSKNTDMEFVPQRRSTLK 132
+S + G K +D+ E + +D E + + ST K
Sbjct: 234 SSFEKGEQRTRKKSDKRESLIKPRLSDSETLSFKDSTNK 272
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 2 SEETSVQHSDTIKEENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDT 61
SE T T + E ++F D HL+ + + + L+++ F+L NE
Sbjct: 1322 SEHTQTVSQLTSQNEVLRNSFRDQVRHLQEEHRKTVETLQQQLSKMEAQLFQLKNEPTTR 1381
Query: 62 TVKDEQQSLKDYYISQIPDLP 82
+ QQSLK+ + DLP
Sbjct: 1382 SPVSSQQSLKNLRERRNTDLP 1402
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 2 SEETSVQHSDTIKEENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDT 61
SE T T + E ++F D HL+ + + + L+++ F+L NE
Sbjct: 1374 SEHTQTVSQLTSQNEVLRNSFRDQVRHLQEEHRKTVETLQQQLSKMEAQLFQLKNEPTTR 1433
Query: 62 TVKDEQQSLKDYYISQIPDLP 82
+ QQSLK+ + DLP
Sbjct: 1434 SPVSSQQSLKNLRERRNTDLP 1454
>AK000713-1|BAA91337.1| 551|Homo sapiens protein ( Homo sapiens
cDNA FLJ20706 fis, clone KAIA1273. ).
Length = 551
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 16 ENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEIND 60
E +T+ ++DY + S K ED F++N TD+ + S EI++
Sbjct: 106 EISTEQELEDYISVIQSIIFKDSEDYFEVNIPTDLRAKHSGEISE 150
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 28 HLRLSYYRKQKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHP 84
++ L Y K+ E + E D +++E ND T E LK + ++++P L P
Sbjct: 1449 NITLPIYTKESESDQEQEEEID----MTSEKNDETESTETSVLKSHLVNEVPVLASP 1501
>M97935-1|AAB64012.1| 750|Homo sapiens transcription factor ISGF-3
protein.
Length = 750
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 7 VQHSDTIKEENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDTTVKDE 66
+QH+ + N DNF +D + + Y KE+ L + S I T + D+
Sbjct: 79 LQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKILENAQRFNQAQSGNIQSTVMLDK 138
Query: 67 QQSLKDYYISQIPD 80
Q+ L D + + D
Sbjct: 139 QKEL-DSKVRNVKD 151
>BT007241-1|AAP35905.1| 712|Homo sapiens signal transducer and
activator of transcription 1, 91kDa protein.
Length = 712
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 7 VQHSDTIKEENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDTTVKDE 66
+QH+ + N DNF +D + + Y KE+ L + S I T + D+
Sbjct: 79 LQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKILENAQRFNQAQSGNIQSTVMLDK 138
Query: 67 QQSLKDYYISQIPD 80
Q+ L D + + D
Sbjct: 139 QKEL-DSKVRNVKD 151
>BC002704-1|AAH02704.1| 712|Homo sapiens signal transducer and
activator of transcription 1, 91kDa protein.
Length = 712
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 7 VQHSDTIKEENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDTTVKDE 66
+QH+ + N DNF +D + + Y KE+ L + S I T + D+
Sbjct: 79 LQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKILENAQRFNQAQSGNIQSTVMLDK 138
Query: 67 QQSLKDYYISQIPD 80
Q+ L D + + D
Sbjct: 139 QKEL-DSKVRNVKD 151
>AY865620-1|AAW56072.1| 750|Homo sapiens signal transducer and
activator of transcription 1, 91kDa protein.
Length = 750
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 7 VQHSDTIKEENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDTTVKDE 66
+QH+ + N DNF +D + + Y KE+ L + S I T + D+
Sbjct: 79 LQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKILENAQRFNQAQSGNIQSTVMLDK 138
Query: 67 QQSLKDYYISQIPD 80
Q+ L D + + D
Sbjct: 139 QKEL-DSKVRNVKD 151
>AY462870-1|AAS58864.1| 452|Homo sapiens POTE8B protein.
Length = 452
Score = 29.5 bits (63), Expect = 4.1
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Query: 17 NTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYIS 76
N D F L Y Q ++ N + +L++E +K + S + ++
Sbjct: 225 NALDRF-GRICQLLSDYKENQMPNNSSGNSNPEQDLKLTSEEEPQRLKGSENSQHEK-VT 282
Query: 77 QIPDLPHPSFTVASIIASASQKMGSVNLKYNDRIEQGNVSKNTDMEFVPQRRS 129
Q PD+ + + QK GS N+ ++ + G + N D VPQR+S
Sbjct: 283 QEPDI---NKDCDREVEEEMQKHGSNNVGLSENLTDGAAAGNGDGGLVPQRKS 332
>AC067945-2|AAY24183.1| 750|Homo sapiens unknown protein.
Length = 750
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 7 VQHSDTIKEENTTDNFIDDYSHLRLSYYRKQKEDSFDLNEVTDISFELSNEINDTTVKDE 66
+QH+ + N DNF +D + + Y KE+ L + S I T + D+
Sbjct: 79 LQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKILENAQRFNQAQSGNIQSTVMLDK 138
Query: 67 QQSLKDYYISQIPD 80
Q+ L D + + D
Sbjct: 139 QKEL-DSKVRNVKD 151
>AY462869-1|AAS58863.1| 498|Homo sapiens POTE8A protein.
Length = 498
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 33 YYRKQKEDSFDLNEVTDISFELSNEINDTTVKDEQQSLKDYYISQIPDLPHPSFTVASII 92
Y Q ++ N + +L++E +K + S + ++Q PD+ + +
Sbjct: 286 YKENQMPNNSSGNSNPEQDLKLTSEEEPQRLKGSENSQHEK-VTQEPDI---NKDCDREV 341
Query: 93 ASASQKMGSVNLKYNDRIEQGNVSKNTDMEFVPQRRS 129
QK GS N+ ++ + G + N D VPQR+S
Sbjct: 342 EEEMQKHGSNNVGLSENLTDGAAAGNGDGGLVPQRKS 378
>BC101474-1|AAI01475.1| 1249|Homo sapiens BRCA1 interacting protein
C-terminal helicase 1 protein.
Length = 1249
Score = 28.7 bits (61), Expect = 7.2
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 35 RKQKEDSFDLNEVTD-----ISFELSNEINDTTVK---DEQQSLKDYYISQIP----DLP 82
RK+K D L E IS S N T + SL Y+ +IP +L
Sbjct: 965 RKEKNDPVFLEEAGKAEKIVISRSTSPTFNKQTKRVSWSSFNSLGQYFTGKIPKATPELG 1024
Query: 83 HPSFTVASIIASASQKMGSVN-LKYNDRIEQGNVSKNTDMEFVPQRRSTLKPKKLD 137
+ +S ++KM S L + D+ E N++ NT PQ + + K+D
Sbjct: 1025 SSENSASSPPRFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSLKID 1080
>BC101472-1|AAI01473.1| 1249|Homo sapiens BRCA1 interacting protein
C-terminal helicase 1 protein.
Length = 1249
Score = 28.7 bits (61), Expect = 7.2
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 35 RKQKEDSFDLNEVTD-----ISFELSNEINDTTVK---DEQQSLKDYYISQIP----DLP 82
RK+K D L E IS S N T + SL Y+ +IP +L
Sbjct: 965 RKEKNDPVFLEEAGKAEKIVISRSTSPTFNKQTKRVSWSSFNSLGQYFTGKIPKATPELG 1024
Query: 83 HPSFTVASIIASASQKMGSVN-LKYNDRIEQGNVSKNTDMEFVPQRRSTLKPKKLD 137
+ +S ++KM S L + D+ E N++ NT PQ + + K+D
Sbjct: 1025 SSENSASSPPRFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSLKID 1080
>AK127558-1|BAC87034.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ45651 fis, clone CTONG2010330, weakly similar
to Homo sapiens phospholipase A2, group IVB (cytosolic)
(PLA2G4B). ).
Length = 492
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 65 DEQQSLKDYYISQIPDLPH-PSFTVASIIASASQKMGSVNLKYN-DRIEQGNV 115
DE ++LK+YY+ + P P P T +I +K + ++ + + +EQG V
Sbjct: 381 DENENLKEYYLMENPQEPDAPIVTFFPLINDTFRKYKAPGVERSPEELEQGQV 433
>AF360549-1|AAK38111.1| 1249|Homo sapiens BRCA1-binding helicase-like
protein BACH1 protein.
Length = 1249
Score = 28.7 bits (61), Expect = 7.2
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 35 RKQKEDSFDLNEVTD-----ISFELSNEINDTTVK---DEQQSLKDYYISQIP----DLP 82
RK+K D L E IS S N T + SL Y+ +IP +L
Sbjct: 965 RKEKNDPVFLEEAGKAEKIVISRSTSPTFNKQTKRVSWSSFNSLGQYFTGKIPKATPELG 1024
Query: 83 HPSFTVASIIASASQKMGSVN-LKYNDRIEQGNVSKNTDMEFVPQRRSTLKPKKLD 137
+ +S ++KM S L + D+ E N++ NT PQ + + K+D
Sbjct: 1025 SSENSASSPPRFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSLKID 1080
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.308 0.126 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,167,462
Number of Sequences: 224733
Number of extensions: 635485
Number of successful extensions: 1420
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1410
Number of HSP's gapped (non-prelim): 21
length of query: 139
length of database: 73,234,838
effective HSP length: 83
effective length of query: 56
effective length of database: 54,581,999
effective search space: 3056591944
effective search space used: 3056591944
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 60 (28.3 bits)
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