Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005157-TA|BGIBMGA005157-PA|IPR002125|CMP/dCMP deaminase,
zinc-binding
(319 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222473-1|BAD96193.1| 270|Homo sapiens single-strand selective... 159 2e-38
AK001235-1|BAA91571.1| 270|Homo sapiens protein ( Homo sapiens ... 159 2e-38
AF489699-1|AAL86910.1| 270|Homo sapiens SMUG1 protein. 159 2e-38
AF125182-1|AAD17301.1| 270|Homo sapiens single-strand selective... 159 2e-38
BC037955-1|AAH37955.2| 193|Homo sapiens DEADC1 protein protein. 140 8e-33
AL031320-2|CAD92490.1| 191|Homo sapiens protein ( Human DNA seq... 140 8e-33
BX538182-1|CAD98054.1| 144|Homo sapiens hypothetical protein pr... 126 1e-28
BC105607-1|AAI05608.1| 177|Homo sapiens SMUG1 protein protein. 78 4e-14
BC088352-1|AAH88352.1| 177|Homo sapiens SMUG1 protein protein. 78 4e-14
BC000417-1|AAH00417.1| 177|Homo sapiens SMUG1 protein protein. 78 4e-14
AK091468-1|BAC03670.1| 161|Homo sapiens protein ( Homo sapiens ... 42 0.002
BC011824-1|AAH11824.1| 351|Homo sapiens hypothetical protein BC... 37 0.082
>AK222473-1|BAD96193.1| 270|Homo sapiens single-strand selective
monofunctional uracil DNA glycosylase variant protein.
Length = 270
Score = 159 bits (385), Expect = 2e-38
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 1 MNPGPWGMSQTGVPFGEISSVRDWLGINGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWG 60
MNPGP+GM+QTGVPFGE+S VRDWLGI G V PP E RPV G +C ++EVSG RFWG
Sbjct: 84 MNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWG 143
Query: 61 LFKNLCGEPNNFFESSFVYNYLPEQWMKNNGCNLTPGDFKAAEIDSLYHICDPIFKKVLE 120
F+NLCG+P FF FV+N P ++ +G NLTP + A + + L ICD + ++
Sbjct: 144 FFRNLCGQPEVFFHHCFVHNLCPLLFLAPSGRNLTPAELPAKQREQLLGICDAALCRQVQ 203
Query: 121 LYDVHIIVAIGKFCELRAQKIL 142
L V ++V +G+ E RA++ L
Sbjct: 204 LLGVRLVVGVGRLAEQRARRAL 225
>AK001235-1|BAA91571.1| 270|Homo sapiens protein ( Homo sapiens
cDNA FLJ10373 fis, clone NT2RM2001935. ).
Length = 270
Score = 159 bits (385), Expect = 2e-38
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 1 MNPGPWGMSQTGVPFGEISSVRDWLGINGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWG 60
MNPGP+GM+QTGVPFGE+S VRDWLGI G V PP E RPV G +C ++EVSG RFWG
Sbjct: 84 MNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWG 143
Query: 61 LFKNLCGEPNNFFESSFVYNYLPEQWMKNNGCNLTPGDFKAAEIDSLYHICDPIFKKVLE 120
F+NLCG+P FF FV+N P ++ +G NLTP + A + + L ICD + ++
Sbjct: 144 FFRNLCGQPEVFFHHCFVHNLCPLLFLAPSGRNLTPAELPAKQREQLLGICDAALCRQVQ 203
Query: 121 LYDVHIIVAIGKFCELRAQKIL 142
L V ++V +G+ E RA++ L
Sbjct: 204 LLGVRLVVGVGRLAEQRARRAL 225
>AF489699-1|AAL86910.1| 270|Homo sapiens SMUG1 protein.
Length = 270
Score = 159 bits (385), Expect = 2e-38
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 1 MNPGPWGMSQTGVPFGEISSVRDWLGINGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWG 60
MNPGP+GM+QTGVPFGE+S VRDWLGI G V PP E RPV G +C ++EVSG RFWG
Sbjct: 84 MNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWG 143
Query: 61 LFKNLCGEPNNFFESSFVYNYLPEQWMKNNGCNLTPGDFKAAEIDSLYHICDPIFKKVLE 120
F+NLCG+P FF FV+N P ++ +G NLTP + A + + L ICD + ++
Sbjct: 144 FFRNLCGQPEVFFHHCFVHNLCPLLFLAPSGRNLTPAELPAKQREQLLGICDAALCRQVQ 203
Query: 121 LYDVHIIVAIGKFCELRAQKIL 142
L V ++V +G+ E RA++ L
Sbjct: 204 LLGVRLVVGVGRLAEQRARRAL 225
>AF125182-1|AAD17301.1| 270|Homo sapiens single-strand selective
monofunctional uracil DNA glycosylase protein.
Length = 270
Score = 159 bits (385), Expect = 2e-38
Identities = 71/142 (50%), Positives = 95/142 (66%)
Query: 1 MNPGPWGMSQTGVPFGEISSVRDWLGINGSVGKPPLEIKSRPVNGFDCKRTEVSGKRFWG 60
MNPGP+GM+QTGVPFGE+S VRDWLGI G V PP E RPV G +C ++EVSG RFWG
Sbjct: 84 MNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSEVSGARFWG 143
Query: 61 LFKNLCGEPNNFFESSFVYNYLPEQWMKNNGCNLTPGDFKAAEIDSLYHICDPIFKKVLE 120
F+NLCG+P FF FV+N P ++ +G NLTP + A + + L ICD + ++
Sbjct: 144 FFRNLCGQPEVFFHHCFVHNLCPLLFLAPSGRNLTPAELPAKQREQLLGICDAALCRQVQ 203
Query: 121 LYDVHIIVAIGKFCELRAQKIL 142
L V ++V +G+ E RA++ L
Sbjct: 204 LLGVRLVVGVGRLAEQRARRAL 225
>BC037955-1|AAH37955.2| 193|Homo sapiens DEADC1 protein protein.
Length = 193
Score = 140 bits (338), Expect = 8e-33
Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 5/145 (3%)
Query: 176 EVPVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYFKNVIV 235
EVPVGC+ N +++ + +N VN T N TRHAE+ IDQ+L++CR + F++ ++
Sbjct: 43 EVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVL 102
Query: 236 YVTVEPCIMCAAALNNLNIREVVYGCPNDRFGG-NTVLDVSNFYEQN----YILNGNLLA 290
YVTVEPCIMCAAAL + I VVYGC N+RFGG +VL++++ N + A
Sbjct: 103 YVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRA 162
Query: 291 DEAMMLLKEFYKGINPNAPESKVKK 315
+EA+ +LK FYK NPNAP+SKV+K
Sbjct: 163 EEAVEMLKTFYKQENPNAPKSKVRK 187
>AL031320-2|CAD92490.1| 191|Homo sapiens protein ( Human DNA
sequence from clone RP1-20N2 on chromosome 6q24. ).
Length = 191
Score = 140 bits (338), Expect = 8e-33
Identities = 69/145 (47%), Positives = 97/145 (66%), Gaps = 5/145 (3%)
Query: 176 EVPVGCVFTVNGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYFKNVIV 235
EVPVGC+ N +++ + +N VN T N TRHAE+ IDQ+L++CR + F++ ++
Sbjct: 41 EVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVL 100
Query: 236 YVTVEPCIMCAAALNNLNIREVVYGCPNDRFGG-NTVLDVSNFYEQN----YILNGNLLA 290
YVTVEPCIMCAAAL + I VVYGC N+RFGG +VL++++ N + A
Sbjct: 101 YVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRA 160
Query: 291 DEAMMLLKEFYKGINPNAPESKVKK 315
+EA+ +LK FYK NPNAP+SKV+K
Sbjct: 161 EEAVEMLKTFYKQENPNAPKSKVRK 185
>BX538182-1|CAD98054.1| 144|Homo sapiens hypothetical protein
protein.
Length = 144
Score = 126 bits (303), Expect = 1e-28
Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 5/135 (3%)
Query: 186 NGQIIAESKNSVNATHNPTRHAEINCIDQILEYCRLNNIDYKLYFKNVIVYVTVEPCIMC 245
N +++ + +N VN T N TRHAE+ IDQ+L++CR + F++ ++YVTVEPCIMC
Sbjct: 4 NNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMC 63
Query: 246 AAALNNLNIREVVYGCPNDRFGG-NTVLDVSNFYEQN----YILNGNLLADEAMMLLKEF 300
AAAL + I VVYGC N+RFGG +VL++++ N + A+EA+ +LK F
Sbjct: 64 AAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLKTF 123
Query: 301 YKGINPNAPESKVKK 315
YK NPNAP+SKV+K
Sbjct: 124 YKQENPNAPKSKVRK 138
>BC105607-1|AAI05608.1| 177|Homo sapiens SMUG1 protein protein.
Length = 177
Score = 78.2 bits (184), Expect = 4e-14
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 1 MNPGPWGMSQTGVPFGEISSVRDWLGINGSVGKPPLEIKSRPVNGFDCKRTE 52
MNPGP+GM+QTGVPFGE+S VRDWLGI G V PP E RPV G +C ++E
Sbjct: 84 MNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSE 135
>BC088352-1|AAH88352.1| 177|Homo sapiens SMUG1 protein protein.
Length = 177
Score = 78.2 bits (184), Expect = 4e-14
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 1 MNPGPWGMSQTGVPFGEISSVRDWLGINGSVGKPPLEIKSRPVNGFDCKRTE 52
MNPGP+GM+QTGVPFGE+S VRDWLGI G V PP E RPV G +C ++E
Sbjct: 84 MNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSE 135
>BC000417-1|AAH00417.1| 177|Homo sapiens SMUG1 protein protein.
Length = 177
Score = 78.2 bits (184), Expect = 4e-14
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 1 MNPGPWGMSQTGVPFGEISSVRDWLGINGSVGKPPLEIKSRPVNGFDCKRTE 52
MNPGP+GM+QTGVPFGE+S VRDWLGI G V PP E RPV G +C ++E
Sbjct: 84 MNPGPFGMAQTGVPFGEVSMVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSE 135
>AK091468-1|BAC03670.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ34149 fis, clone FCBBF3012588, highly similar to
Homo sapiens single-strand selective monofunctional
uracil DNA ).
Length = 161
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 78 VYNYLPEQWMKNNGCNLTPGDFKAAEIDSLYHICDPIFKKVLELYDVHIIVAIGKFCELR 137
+YN + W + NLTP + A + + L ICD + ++L V ++V +G+ E R
Sbjct: 54 IYNPVEYAWEPHR--NLTPAELPAKQREQLLGICDAALCRQVQLLGVRLVVGVGRLAEQR 111
Query: 138 AQKIL 142
A++ L
Sbjct: 112 ARRAL 116
>BC011824-1|AAH11824.1| 351|Homo sapiens hypothetical protein
BC011824 protein.
Length = 351
Score = 37.1 bits (82), Expect = 0.082
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 235 VYVTVEPCIMCAAALNNLNIREVVYGCPN 263
+YVT EPC MCA AL + I V YG P+
Sbjct: 284 LYVTREPCAMCAMALVHARILRVFYGAPS 312
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.139 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,572,719
Number of Sequences: 224733
Number of extensions: 1926900
Number of successful extensions: 5598
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5583
Number of HSP's gapped (non-prelim): 12
length of query: 319
length of database: 73,234,838
effective HSP length: 90
effective length of query: 229
effective length of database: 53,008,868
effective search space: 12139030772
effective search space used: 12139030772
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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