GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005155-TA|BGIBMGA005155-PA|IPR001395|Aldo/keto reductase
         (298 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   1.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    24   1.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    24   1.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   2.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   3.3  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   5.7  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    22   5.7  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    22   5.7  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    22   5.7  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    22   5.7  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    22   5.7  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    22   5.7  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    22   5.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 176  KLSIPIVAYSPLGSKALADALAAKTGRDYPDL 207
            K ++ + AY+ +GS  L++ L  +T  D P +
Sbjct: 1082 KYTLVVQAYNQVGSGPLSEPLLTQTMEDVPSI 1113


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 176  KLSIPIVAYSPLGSKALADALAAKTGRDYPDL 207
            K ++ + AY+ +GS  L++ L  +T  D P +
Sbjct: 1078 KYTLVVQAYNQVGSGPLSEPLLTQTMEDVPSI 1109


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 13  NKNKQYSDIKNIKLNANYRNDEVYQECSYQTPTLKSLKNVKDVSDLVG--VHNNIHHKTN 70
           ++ ++    KN      YR  E  +E S      +  +  K +S L    +HNN ++K N
Sbjct: 42  SREREQKSYKNENSYRKYR--ETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYN 99

Query: 71  MEQSWSKVY 79
              +  K+Y
Sbjct: 100 YNNNCKKLY 108


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 158 QVEVHLLCQQKALVEAAKKLSIPIVAYSPLGSKALADALAAK 199
           Q+  H++  +KAL E AKK+++  +  +   S   A+   AK
Sbjct: 233 QIVSHVVNHEKALREQAKKMNVDSLRSNANTSSQSAEIRIAK 274


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 229 LRYTVQRGLAAIPKSTNPTRIKQNLSIWDFE 259
           L Y +Q  + +   ST    I++  SIWD++
Sbjct: 292 LEYDLQTSIMSRHYSTRAIVIEKGQSIWDYD 322


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 33  DEVYQECSYQTPTLKSLKNVKDVSDLVGVHNNIHHKTNMEQSWSKVYK 80
           D   +E S +   + SL N    S+    +NN ++  N   +++  YK
Sbjct: 302 DRTERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNNYNNNYNNNYK 349


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 8   SYEVNNKNKQYSDIKNIKLNANY 30
           +Y   N N  Y++ K +  N NY
Sbjct: 93  NYNNYNNNNNYNNYKKLYYNINY 115


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.131    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,102
Number of Sequences: 429
Number of extensions: 3559
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 298
length of database: 140,377
effective HSP length: 57
effective length of query: 241
effective length of database: 115,924
effective search space: 27937684
effective search space used: 27937684
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 43 (21.4 bits)