SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005154-TA|BGIBMGA005154-PA|IPR001395|Aldo/keto reductase
         (152 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism...   106   2e-24
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy...    91   5e-20
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc...    78   7e-16
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc...    69   3e-13
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc...    56   2e-09
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo...    49   3e-07
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy...    46   2e-06
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom...    40   1e-04
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi...    32   0.033
SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit L7|...    29   0.31 
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy...    25   6.6  
SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyce...    25   6.6  

>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 325

 Score =  106 bits (254), Expect = 2e-24
 Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 6/145 (4%)

Query: 6   YFELNGGDRMPKIGFGTWQSSDEVLEKAVLAALDAGYRHFDTAHAYENEAALGRALRKWI 65
           YF L  GD++P IG GTW+S  +  + AV AAL AGYRH DTAH Y NE  +G  +R   
Sbjct: 14  YFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR--- 70

Query: 66  GDNPAKRRELFVVTKLPPGGNRPELVREYFDTSFRNLGLDYIDMYLMHTPFAFEHVPGDL 125
            ++   R +++V +KL    +R  LV    + + ++L L+YID YL+H PFA    P +L
Sbjct: 71  -ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEEL 129

Query: 126 HPKNPDGTMKVDYSTDLAAVWKVSE 150
            P+N  G + +     +   W+  E
Sbjct: 130 -PRNEKGEL-IYEDVPIEETWQAME 152


>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 321

 Score = 91.5 bits (217), Expect = 5e-20
 Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 6   YFELNGGDRMPKIGFGTWQSSDEVLEKAVLAALDAGYRHFDTAHAYENEAALGRALRKWI 65
           +F L  G ++P +G GTW+S     + AV  AL  GYRH D A  Y NE  +G  ++   
Sbjct: 15  HFTLADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK--- 71

Query: 66  GDNPAKRRELFVVTKLPPGGNRPELVREYFDTSFRNLGLDYIDMYLMHTPFAFEHVPGDL 125
            ++   R++++V +KL    + PE V +  + + ++L LDY+D YL+H P +F+    D 
Sbjct: 72  -ESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFK-TGEDK 129

Query: 126 HPKNPDGTMKVDYSTDLAAVWKVSE 150
            PK+ DG + +     +   WK  E
Sbjct: 130 FPKDKDGNL-IYEKNPIEETWKAME 153


>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 275

 Score = 77.8 bits (183), Expect = 7e-16
 Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 6   YFELNGGDRMPKIGFGTWQSSDEVLEKAVLAALDAGYRHFDTAHAYENEAALGRALRKWI 65
           + +LN G + P+  +G++  +      +V AAL  GYRH D+A  Y NEA  GRA+ K++
Sbjct: 5   FVKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFM 64

Query: 66  GDNPAKRRELFVVTKLPP-GGNRPELVREYFDTSFRNLGLDYIDMYLMHTPF 116
            +   KR +++  +KL    G +  L     D S +  GL YID++L+H+P+
Sbjct: 65  EETGTKREDIWFTSKLNDLSGYKSTL--SSIDASVKACGLGYIDLFLLHSPY 114


>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 283

 Score = 68.9 bits (161), Expect = 3e-13
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 9   LNGGDRMPKIGFGTWQSSDEVLEKAVLAALDAGYRHFDTAHAYENEAALGRALRKWIGDN 68
           L  G  +P+IGFG +          V  ALD+GYRH DTA  Y NE   G+A+  W   N
Sbjct: 13  LTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKN 72

Query: 69  PAKRRELFVVTKLPPGGNRPELVREYFDTSFRNLGLDYIDMYLMHTP 115
             KR ++F+ +KL    +     R    +S  +LG  YID++L+ +P
Sbjct: 73  NVKRTDIFLTSKLANCSDYYS-TRAAIRSSLHHLG-TYIDLFLIQSP 117


>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
           reductase AKR3C2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 284

 Score = 56.0 bits (129), Expect = 2e-09
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 9/87 (10%)

Query: 33  AVLAALDAGYRHFDTAHAYENEAALGRALRKWIGDNPAKRRELFVVTKLPPG-GNRPELV 91
           +V  AL AG+ H D A  Y NE  +G AL++   + P  R +LF+ +K+     N PE +
Sbjct: 36  SVKNALAAGFIHIDCAEVYGNEEEVGVALKE--ANVP--RSKLFITSKVMHNVDNIPEAL 91

Query: 92  REYFDTSFRNLGLDYIDMYLMHTPFAF 118
            E    S R LG DY+D+YL+H+P  F
Sbjct: 92  NE----SLRKLGTDYLDLYLLHSPIPF 114


>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
           YakC|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 340

 Score = 49.2 bits (112), Expect = 3e-07
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 25/123 (20%)

Query: 11  GGDRMPKIGFGTW-------QSSDEVLEKAVLAALDAGYRHFDTAHAY---ENEAALGRA 60
           G D +P IGFG          SS+E  +  +  A D G   +D++  Y    NE  +GR 
Sbjct: 9   GNDTVPAIGFGCMGLHAMYGPSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGR- 67

Query: 61  LRKWIGDNPAKRRELFVVTKL-----PPGG-----NRPELVREYFDTSFRNLGLDYIDMY 110
              W      +R+E+F+ TK      P  G     N P+ + +  D S + LG+D ID+Y
Sbjct: 68  ---WFKQT-GRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLY 123

Query: 111 LMH 113
            +H
Sbjct: 124 YVH 126


>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 276

 Score = 46.4 bits (105), Expect = 2e-06
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)

Query: 20  FGTWQSSDEVLEKAVLAALDAGYRHFDTAHAYENEAALGRALRKWIGDNP-AKRRELFVV 78
           FG +Q  D    + V+ AL  G R  D+A  Y NE    +A++ +   N   KR ++ ++
Sbjct: 18  FGVYQLKD--CYQQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLI 75

Query: 79  TKLPPGGNRPELVREYFDTSFRNLGLDYIDMYLMHTP 115
           TK+P      E   +  + S R  G   +D+ L+H+P
Sbjct: 76  TKIPDSLQGFERTWKAVEQSLRRTGRPKLDVVLIHSP 112


>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 344

 Score = 40.3 bits (90), Expect = 1e-04
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 37  ALDAGYRHFDTAHAYEN---EAALGRALRK--WIGDNPAKRRELF--VVTKLP--PGGNR 87
           A D G   FDTA  Y N   E  +G+A+++  W         ++F    TKLP   G +R
Sbjct: 53  AWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSR 112

Query: 88  PELVREYFDTSFRNLGLDYIDMYLMHTP 115
             ++ E  + S + LGL Y+D+ + H P
Sbjct: 113 KHII-EGLNASLKRLGLPYVDVIMAHRP 139


>SPAC977.14c |||aldo/keto reductase, unknown biological
          role|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 351

 Score = 32.3 bits (70), Expect = 0.033
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 27 DEVLEKAVLAALDAGYRHFDTAHAYE---NEAALGRALRKW 64
          +E + K + AA DAG R FDTA+ Y    +E  +G+ +RK+
Sbjct: 43 EEEVFKIMKAAYDAGIRTFDTANCYSAGVSEELVGKFIRKY 83


>SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit
          L7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 287

 Score = 29.1 bits (62), Expect = 0.31
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 38 LDAGYRH-FDTAHAYENEAALGRALRKWIGDNP 69
          L A YRH  DTA + +      R L +WIGDNP
Sbjct: 65 LAASYRHDIDTALSTDEHTQKDR-LPRWIGDNP 96


>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 973

 Score = 24.6 bits (51), Expect = 6.6
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 46  DTAHAYENEAALGRALRK--WIGDNPAKRRELFVVTKLPPGGNRPELVR 92
           D A A EN    G    K  W+  +P+K+ + F      PG  RP L R
Sbjct: 231 DQASASENNKDRGEFEGKDEWLLPHPSKKGQTFEGGFTIPGDIRPHLFR 279


>SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 469

 Score = 24.6 bits (51), Expect = 6.6
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 11/86 (12%)

Query: 31  EKAVLAALDAGYRHFDTAHAYENEAALGRALRKWIGDNPAKRRE---LFVVTKLPPGGNR 87
           +K  +A+ D G  HF+TA+++E    L  +L + +G     RR     F V+ +      
Sbjct: 5   QKQHVASEDQG--HFNTAYSHEEFNFLQSSLTRKLGPEYVSRRSGPGGFSVSYI-ESWKA 61

Query: 88  PELVREYF-----DTSFRNLGLDYID 108
            EL  E F      +S R++ +D++D
Sbjct: 62  IELANEIFGFNGWSSSIRSINVDFMD 87


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.319    0.138    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,515
Number of Sequences: 5004
Number of extensions: 33524
Number of successful extensions: 62
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 47
Number of HSP's gapped (non-prelim): 12
length of query: 152
length of database: 2,362,478
effective HSP length: 67
effective length of query: 85
effective length of database: 2,027,210
effective search space: 172312850
effective search space used: 172312850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)

- SilkBase 1999-2023 -