GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005154-TA|BGIBMGA005154-PA|IPR001395|Aldo/keto reductase
         (152 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   9.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 105 DYIDMYLMHTPFAFEHVPGD 124
           D++ +   HT    E VPGD
Sbjct: 132 DFVKVLSWHTDQGEEFVPGD 151


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 19  GFGTWQSSDEVLEKA 33
           GF  W SSD++  KA
Sbjct: 329 GFIIWGSSDDINTKA 343


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.138    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,367
Number of Sequences: 429
Number of extensions: 2151
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 152
length of database: 140,377
effective HSP length: 53
effective length of query: 99
effective length of database: 117,640
effective search space: 11646360
effective search space used: 11646360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)