Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005151-TA|BGIBMGA005151-PA|IPR001208|MCM,
IPR008994|Nucleic acid-binding, OB-fold, IPR008048|MCM protein 5
(675 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 669 0.0
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 285 7e-77
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 283 3e-76
Z81039-6|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 277 2e-74
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 268 7e-72
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 219 7e-57
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 219 7e-57
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 219 7e-57
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 219 7e-57
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 33 0.66
Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical pr... 31 2.7
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 30 4.6
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 30 4.6
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 8.1
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical
protein R10E4.4 protein.
Length = 759
Score = 669 bits (1654), Expect = 0.0
Identities = 317/539 (58%), Positives = 414/539 (76%), Gaps = 13/539 (2%)
Query: 1 MEGFDDPGVFFSDNF----GVEENESQDHVNLQAVKKKFKEFMRQFHTGNFNYKYRDALK 56
M D+PG+++ + F GV + + + + +F+ F+R F TG F YRD LK
Sbjct: 1 MSNLDNPGIYYQERFFANDGVPDTGRELIAEYRQLITQFRNFIRDFSTGGFGMIYRDQLK 60
Query: 57 RNYNLNQYWVEINIEDLSSFDDVLAEKLYKKPTEHLPIXXXXXXXXXXXXXXPRPEGEEK 116
RNY ++Y +EIN+ L +FD+ + KL K P + LP PRP+GEEK
Sbjct: 61 RNYFSHEYRLEINLNHLKNFDEDIEMKLRKFPGKVLPALEEAAKIVADEITTPRPKGEEK 120
Query: 117 VEDIQVLLSSDAHSSNLRELKSETVSRLVKIPGIVISASGIKAKATKISIQCRSCRNVIP 176
+ DIQV L+ D + ++LR++KS VS++VKI GI+++A+ +++KATK+++QCR C++ IP
Sbjct: 121 LHDIQVTLTLDEYPTSLRQVKSAQVSQVVKISGIIVAAAQVRSKATKVTLQCRQCKHTIP 180
Query: 177 NLPVKPGLEGYVMPRKCNTEQSGR-PKCPLDPYFIIPDKCKCIDYQVLKLQEAPESIPQG 235
++ +KPGLEG+ +PR C Q G+ +CP+DPY ++PDKC+C+DYQ LKLQE PE +P G
Sbjct: 181 DVSIKPGLEGFALPRTCAAPQQGQMQRCPIDPYIMLPDKCECVDYQTLKLQENPEDVPHG 240
Query: 236 EMPRHLTVYCDRTLCERVAPGARVTVLGIYSIKKIAKVGREGRDKGSVGVRSSYLRAVGL 295
EMPRHL ++ +R L ++V PG RVT++G+YSIKK+ + ++G DK G+R+ YLR +G+
Sbjct: 241 EMPRHLQLFTERYLTDKVVPGNRVTIVGVYSIKKL--IQKKGGDKSLQGIRTPYLRVLGI 298
Query: 296 ---TAEEGVTSGLRPFTAEEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLF 352
T+ G T+ FT EEE F+ LA D YE I KSIAPS++G+ D+KK+IACLLF
Sbjct: 299 HMETSGPGRTN-FTTFTPEEERMFKTLAQRKDAYELIAKSIAPSIYGSADIKKSIACLLF 357
Query: 353 GGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASV 412
GG+RK+LPDG+TRRGDIN+LLLGDPGTAKSQLLKFVE+V+PIGVYTSGKGSSAAGLTASV
Sbjct: 358 GGARKKLPDGITRRGDINVLLLGDPGTAKSQLLKFVEQVSPIGVYTSGKGSSAAGLTASV 417
Query: 413 IRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTL 472
IRDP SR+F+MEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTL
Sbjct: 418 IRDPQSRSFIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTL 477
Query: 473 NSRCSVLAAANSVFGRWDDTKADDNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYVL 529
NSRCSVLAAANSV+GRWD+++ DDNIDFMPTILSRFDMI+IVKD HD +D +A++V+
Sbjct: 478 NSRCSVLAAANSVYGRWDESRGDDNIDFMPTILSRFDMIYIVKDTHDVLKDATLAKHVI 536
Score = 173 bits (420), Expect = 4e-43
Identities = 83/130 (63%), Positives = 107/130 (82%), Gaps = 1/130 (0%)
Query: 546 SIPITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRLFQVSTLDAAMTGSLAGAEGFT 605
+IPITVRQLEAIVRI+ES+AKM+LQ FAT+ HV EALRLF+VST++AA TG+LAG EGFT
Sbjct: 629 AIPITVRQLEAIVRIAESIAKMELQQFATDKHVEEALRLFRVSTIEAAATGNLAGVEGFT 688
Query: 606 TEEDHEMLTRVEKQLKRRFAVGSQVSEQTIIQDFL-RQKYPERAILKVIHMMIRRGELQH 664
+ D E L R+E Q+K+RFA+G+ VSE I+QDF+ RQ Y E + KVI ++RRG+LQ
Sbjct: 689 STADQEALNRIEVQMKKRFAIGTHVSEHLIVQDFVARQHYRESLVKKVIDNLVRRGDLQQ 748
Query: 665 RLQRKMLYRL 674
++QRKMLYR+
Sbjct: 749 KMQRKMLYRV 758
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 285 bits (699), Expect = 7e-77
Identities = 199/601 (33%), Positives = 311/601 (51%), Gaps = 45/601 (7%)
Query: 23 QDHVNLQAVKK----KFKEFMRQFHT-GNFNYKYRDALKRNYNLNQYWVEINIEDLS--S 75
+DHV+ +AV K +FK F+R FH GN KY +K N+ +E++ DLS +
Sbjct: 156 RDHVSDEAVAKEIERRFKNFLRSFHEPGNKQTKYIQMIKSMAADNRESLEVSFTDLSDDN 215
Query: 76 FDDVLAEKLYKKPTEHLPIXXXXXXXXXXXXXXPRPEGEEKVEDIQVLLSSDAHSSNLRE 135
+ ++ L + P E L I P +I+V +S ++R
Sbjct: 216 GEQNISYFLPEAPNEMLAIMDRAATEVVMNMY---PFYSRVCNEIKVRISQLPVEEDIRM 272
Query: 136 LKSETVSRLVKIPGIVISASGIKAKATKISIQCRSCRNVIPNLPVKPGLEGYVMPRKCNT 195
L+ ++ L++ G+V ASGI + + C +C ++ P + V P C
Sbjct: 273 LRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVACGYLLG--PFVQQNDEEVRPTIC-- 328
Query: 196 EQSGRPKCP-LDPYFIIPDKCKCIDYQVLKLQEAPESIPQGEMPRHLTVYCDRTLCERVA 254
P C P+ + + +YQ + +QE+P + G +PR V LC+
Sbjct: 329 -----PSCQGKGPFELNVENTVYHNYQRITMQESPNKVAAGRLPRSKDVILLGDLCDSCK 383
Query: 255 PGARVTVLGIYSIKKIAKVGREGRDKGSVGVRSSYLRAVGLTAEEGVTSGLRPFTAEEEE 314
PG + V G+Y+ + K V ++ + A +T ++ + S T E+ +
Sbjct: 384 PGDEIEVTGVYTNNFDGSLNY----KQGFPVFNTLIHANHITNKDKMASD--QLTDEDIK 437
Query: 315 QFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGGSRKRLPDGLTRRGDINILLL 374
R L+ P+I +R+ SIAPS++G D+K+AIA LF G K RGDIN+LL
Sbjct: 438 AIRELSQDPNISQRVFSSIAPSIYGHDDVKRAIALALFRGEAKNPGAKHRLRGDINVLLC 497
Query: 375 GDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIRDPGSRNFVMEGGAMVLADGG 434
GDPGTAKSQ L++ +AP V T+G+G+SA GLTA V R P +R + +E GAMVLAD G
Sbjct: 498 GDPGTAKSQFLRYAAHIAPRSVLTTGQGASAVGLTAYVQRHPVTREWTLEAGAMVLADKG 557
Query: 435 VVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDDTKA 494
V IDEFDKM + DR +IHEAMEQQ+ISI+KAGI T+L++RC+V+AA+N + GR++ T+
Sbjct: 558 VCLIDEFDKMSDQDRTSIHEAMEQQSISISKAGIVTSLHARCTVIAASNPIGGRYNPTRT 617
Query: 495 -DDNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYV-------------LMRTGALQHE 538
+N+D ILSRFD++ +++D D D +A++V +++ G E
Sbjct: 618 FAENVDLTEPILSRFDVLCVIRDSVDSVEDERLAKFVVGNHRTHHPDAKKIVKEGDELEE 677
Query: 539 RQADKRLSIPITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRLFQVSTLDAAMTGSL 598
Q D+R + + + L +R A+ + P E H + +F ++ TGS+
Sbjct: 678 DQMDERTGVRLIPQDL---LRKYIIYAREKCHPTLPEQHSEKFSNIFAQMRKESMATGSV 734
Query: 599 A 599
A
Sbjct: 735 A 735
Score = 34.3 bits (75), Expect = 0.28
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 546 SIPITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRL 584
S+ ITVR +E+++R+SE+ AK+ L+ + + A+R+
Sbjct: 733 SVAITVRHVESMIRLSEAHAKLHLRSYVNDEDCAAAIRV 771
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 283 bits (694), Expect = 3e-76
Identities = 173/464 (37%), Positives = 257/464 (55%), Gaps = 23/464 (4%)
Query: 66 VEINIEDLSSFDDVLAEKLYKKPTEHLPIXXXXXXXXXXXXXXPRPEGEEKVEDIQVLLS 125
+ +N++ L++F + L K+ P + +P + I++
Sbjct: 172 INLNLKHLNAFSEALYRKVIAYPADVIPYLDIVVNEVFAERF-----NRTLAQSIELRPF 226
Query: 126 SDAHSSNLRELKSETVSRLVKIPGIVISASGIKAKATKISIQCRSCRNVIPNLPVKPGLE 185
+ + N+R L V +L+ I G+V S + + QC C I + K +E
Sbjct: 227 NAQKTRNMRGLNPNDVDQLITISGMVTRTSSLIPEMRSGYFQCAVCAFGIESEVDKGRIE 286
Query: 186 GYVMPRKCNTEQSGRPKCPLDPYFIIPDKCKCIDYQVLKLQEAPESIPQGEMPRHLTVYC 245
V+ C+ C + ++ ++ +D QV+KLQE+P+ +P GE P ++VY
Sbjct: 287 EPVVCTNCSNTH-----C----FQLVHNRSVFLDKQVVKLQESPDDMPSGETPHTVSVYA 337
Query: 246 DRTLCERVAPGARVTVLGIYSIKKIAKVGREGRDKGSV---GVRSSYLRAVGLTAEEGVT 302
+L E V PG R+TV GI+ + KV + R SV + + + R + T+
Sbjct: 338 HGSLVESVQPGDRITVTGIFRATGM-KVNPKQRALASVYRTSIDALHFRKMD-TSRLHQD 395
Query: 303 SGLRPFTAEEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGGSRK--RLP 360
+G T E +Q L+ PDI + + +SIAPS++ D+K+ + CLLFGG+RK
Sbjct: 396 NG-ETITEERIQQIIELSKRPDIMDALAQSIAPSIYEHDDVKRGLLCLLFGGTRKDDETT 454
Query: 361 DGLTRRGDINILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIRDPGSRN 420
+ R +INILL GDPGT+KSQ+L++V ++ P YTSGKGSSA GLTASV RD ++
Sbjct: 455 NKTKLRSEINILLCGDPGTSKSQMLQYVYRLLPRSQYTSGKGSSAVGLTASVSRDADTKQ 514
Query: 421 FVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLA 480
V++ GA+VLAD GV CIDEFDKM E R +HE MEQQT+SIAKAGI LN+R SVLA
Sbjct: 515 LVLQTGALVLADNGVCCIDEFDKMNESARSVLHEVMEQQTLSIAKAGIICQLNARASVLA 574
Query: 481 AANSVFGRWDDTKA-DDNIDFMPTILSRFDMIFIVKDEHDQNRD 523
AAN V +W+ K +NI T+LSRFD+IF++ D D+ +D
Sbjct: 575 AANPVDSKWNRNKTIVENITLPHTLLSRFDLIFLIVDAQDEMQD 618
Score = 32.7 bits (71), Expect = 0.87
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 524 IARYVLMRTGALQHERQADKRLSIPITVRQLEAIVRISESLAKMQLQPFATEAHVNEALR 583
I +Y+ MR QH + I RQLE+++R+SE+ AK++L + V +A
Sbjct: 671 IEKYLFMRKAGAQHGQ-------ITAYPRQLESLIRLSEAHAKIRLSQEVSVDDVEKAFT 723
Query: 584 LFQVSTLDAAMTGS 597
L++ + +A+ S
Sbjct: 724 LWREALKQSAVDPS 737
>Z81039-6|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 277 bits (679), Expect = 2e-74
Identities = 162/402 (40%), Positives = 235/402 (58%), Gaps = 17/402 (4%)
Query: 132 NLRELKSETVSRLVKIPGIVISASGIKAKATKISIQCRSCRNVIPNLPVK-PGLEGYVMP 190
N R LKS + LV GIV S ++ K C + V+ L+ V
Sbjct: 117 NPRTLKSSYLGNLVCCEGIVTKCSTVRQKLLTSVHYCPATNKVLEKKFADFTMLDTAVTN 176
Query: 191 RKCNTEQSGRPKCPLDPYFIIPDKCKCIDYQVLKLQEAPESIPQGEMPRHLTVYCDRTLC 250
TE K PL+ F D+Q +QE PES P G++PR + D L
Sbjct: 177 NNYPTEDEN--KNPLETEF---GHSVYKDHQTFTIQELPESAPAGQLPRAVDCVADLDLA 231
Query: 251 ERVAPGARVTVLGIYSIKKIAKVGREGRDKGSVGVRSSYLRAVGLTAEEGVTSGLRPFTA 310
+RV PG RV ++G++ + + G S+ + + + + ++E + + F
Sbjct: 232 DRVKPGDRVRIIGVFRVLPNKQNGVSSGSFRSIII----INHIQMLSKEVIPN----FEP 283
Query: 311 EEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGGSRKRLPDGLTRRGDIN 370
++ + R+++ S + +E + +S+APS+ G + KKA+ CLL GG K L +G RGDIN
Sbjct: 284 QDVKDVRKISKSRNPFELLARSLAPSICGHEETKKALLCLLLGGMEKILNNGSRLRGDIN 343
Query: 371 ILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIRDPGSRNFVMEGGAMVL 430
+LL+GDP AKSQLL++V ++AP + T+G+GSS GLTA+V DP S +E GAMVL
Sbjct: 344 VLLIGDPSVAKSQLLRYVLRMAPRAITTTGRGSSGVGLTAAVTTDPDSGERRLEAGAMVL 403
Query: 431 ADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWD 490
AD GVVCIDEFDKM + DR AIHE MEQ ++I+KAGI LN+RCSVLAAAN V+GR++
Sbjct: 404 ADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHAKLNARCSVLAAANPVYGRYN 463
Query: 491 DTKAD-DNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYVL 529
K+ +NI ++LSRFD+IF++ DEHD ++D +A +VL
Sbjct: 464 PFKSPMENIGMQDSLLSRFDLIFVLLDEHDADKDANVAEHVL 505
Score = 32.3 bits (70), Expect = 1.1
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 540 QADKRLSIPITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRL 584
+ D+ ++P+T RQLE ++R+S ++AK + +A L
Sbjct: 601 KTDQERTMPVTARQLETLIRLSTAIAKARFSKKVEREDTEKAYNL 645
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 268 bits (658), Expect = 7e-72
Identities = 166/467 (35%), Positives = 262/467 (56%), Gaps = 19/467 (4%)
Query: 117 VEDIQVLLSSD--AHSSNLRELKSETVSRLVKIPGIVISASGIKAKATKISIQCRSCRNV 174
++ +V ++D AH + +R +K+ + LV + G+VI A+ +K ++ C +C
Sbjct: 144 LQRFEVYFTTDDAAHETCVRNIKATEIGHLVSMKGVVIRATEVKPCVEVMTYTCDTCAAE 203
Query: 175 IPNLPVKPGLEGYVMPRKCNTEQSGRPKCPLDPYFIIPDKCKCIDYQVLKLQEAPESIPQ 234
+ PVK G++ + P C ++ K + + K + +Q LK+QE E +P
Sbjct: 204 VYQ-PVK-GMQ-FTPPVNCPNKECVEAKANGRLHMQLRGS-KFVKFQELKIQELSEQVPV 259
Query: 235 GEMPRHLTVYCDRTLCERVAPGARVTVLGIYSIKKIAKVGREGRDKGSVGVRSSYLRAVG 294
G +PR +TV+ + + G V V G++ I + G R G + V +YL A
Sbjct: 260 GSIPRTMTVHVYGEMTRKCNTGNVVHVSGVFL--PIMQSGF--RPTGGL-VADTYLEAHY 314
Query: 295 LTAEEGVTSGLRPFTAEEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGG 354
+ + + F + + L D YE + SIAP +FG VD+KK + L GG
Sbjct: 315 INNLDDNPT----FNGVQSAELEVLRRKGDNYETLAASIAPEIFGHVDVKKCLLMALVGG 370
Query: 355 SRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIR 414
+ +G+ RG IN+L++GDPG AKSQLL +V ++AP YT+G+GSS GLTA+V++
Sbjct: 371 NDNS-SNGMKIRGCINVLMMGDPGVAKSQLLGYVNRLAPRSQYTTGRGSSGVGLTAAVMK 429
Query: 415 DPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNS 474
DP + +EGGA+VLADGG+ CIDEFDKM + DR AIHE MEQQTISIAKAGI TTLN+
Sbjct: 430 DPVTGEMSLEGGALVLADGGICCIDEFDKMMDHDRTAIHEVMEQQTISIAKAGIMTTLNA 489
Query: 475 RCSVLAAANSVFGRWDDTKA-DDNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYVLMR 531
R +++AAAN +GR++ ++ + N+D +LSRFD+I +++D+ D+ D +A ++
Sbjct: 490 RTAIIAAANPAYGRYNPNRSIEQNVDLPAALLSRFDLILLMQDKADRENDKILAEHITYV 549
Query: 532 TGALQHERQADKRLSIPITVRQLEAIVRISESLAKMQLQPFATEAHV 578
H + K L T+R+ ++ + L+ EA+V
Sbjct: 550 HQHGCHPNREKKDLISLETLREYISLCKTYTPTVDPALRERIVEAYV 596
Score = 31.9 bits (69), Expect = 1.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 549 ITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRLFQ 586
++ R + IVR++ + AK++L E+ V EALRL Q
Sbjct: 611 VSPRMILGIVRMATARAKLRLSTIVDESDVEEALRLMQ 648
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 219 bits (534), Expect = 7e-57
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 4/238 (1%)
Query: 309 TAEEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGGSRKRLPD-GLTRRG 367
+ E+ ++++ I + I S+ P+++G ++K + +L GG K+ D G + RG
Sbjct: 330 STEDRATLKKMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLMLLGGVAKKSRDEGTSLRG 389
Query: 368 DINILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIRDPGSRNFVMEGGA 427
DIN+ L+GDP TAKSQ+LK VE+ +P +YTSGK SSAAGLTA+V++D S FV+E GA
Sbjct: 390 DINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGA 449
Query: 428 MVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFG 487
++LAD GV CIDEFDKM D+VAIHEAMEQQTISI KAG+ TLN+R S+LAAAN V G
Sbjct: 450 LMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLNARASILAAANPVNG 509
Query: 488 RWDDTK-ADDNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYVLMRTGALQHERQAD 542
R+D ++ N+ I+SRFD+ F++ DE ++ D IAR +L A+ + D
Sbjct: 510 RYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECNEVTDYAIARRILDNHRAISEHTERD 567
Score = 66.5 bits (155), Expect = 6e-11
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 10/249 (4%)
Query: 31 VKKKFKEFMRQFHTGNFNYKYRDALKRNYNLNQYWVEINIEDLSSFDDVLAEKLYKKPTE 90
V+ +F +F++ F + Y+ A+K + + IN++ L F + LA + +
Sbjct: 20 VQNEFSKFLKSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATTIELQYYR 79
Query: 91 HLPIXXXXXXXXXXXXXXPRPEGEEKVEDIQVLLSSDAHSSNLRELKSETVSRLVKIPGI 150
P + + + V L + + +REL ++ V LV+I G
Sbjct: 80 VYPFMCEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKVRELSADKVGGLVRIAGQ 139
Query: 151 VISASGIKAKATKISIQCRSCRNVIPNLPVKPGLEGYVMPRKC-NTEQSGRPKCPLDPYF 209
++ + + ++ C C + V+ Y P KC N + R + LD
Sbjct: 140 IVRTHPVHPELSRACFVCEDCG--VTTRDVQQQFR-YTQPTKCANPQCMNRTRFSLDV-- 194
Query: 210 IIPDKCKCIDYQVLKLQEAPESIPQGEMPRHLTVYCDRTLCERVAPGARVTVLG-IYSIK 268
+ +D+Q +++QE +P+G +PR + V + E V PG + ++G + I
Sbjct: 195 ---NSSTFVDFQKIRIQETQAELPRGSIPRTVDVIVRGEMVETVQPGDKCDIVGTLIVIP 251
Query: 269 KIAKVGREG 277
IA++ G
Sbjct: 252 DIAQLSTPG 260
Score = 35.9 bits (79), Expect = 0.093
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 549 ITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRLFQVS 588
ITVRQLE++VR+SE+LA++ HV +A L S
Sbjct: 619 ITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELLNKS 658
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 219 bits (534), Expect = 7e-57
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 4/238 (1%)
Query: 309 TAEEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGGSRKRLPD-GLTRRG 367
+ E+ ++++ I + I S+ P+++G ++K + +L GG K+ D G + RG
Sbjct: 330 STEDRATLKKMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLMLLGGVAKKSRDEGTSLRG 389
Query: 368 DINILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIRDPGSRNFVMEGGA 427
DIN+ L+GDP TAKSQ+LK VE+ +P +YTSGK SSAAGLTA+V++D S FV+E GA
Sbjct: 390 DINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGA 449
Query: 428 MVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFG 487
++LAD GV CIDEFDKM D+VAIHEAMEQQTISI KAG+ TLN+R S+LAAAN V G
Sbjct: 450 LMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLNARASILAAANPVNG 509
Query: 488 RWDDTK-ADDNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYVLMRTGALQHERQAD 542
R+D ++ N+ I+SRFD+ F++ DE ++ D IAR +L A+ + D
Sbjct: 510 RYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECNEVTDYAIARRILDNHRAISEHTERD 567
Score = 66.5 bits (155), Expect = 6e-11
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 10/249 (4%)
Query: 31 VKKKFKEFMRQFHTGNFNYKYRDALKRNYNLNQYWVEINIEDLSSFDDVLAEKLYKKPTE 90
V+ +F +F++ F + Y+ A+K + + IN++ L F + LA + +
Sbjct: 20 VQNEFSKFLKSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATTIELQYYR 79
Query: 91 HLPIXXXXXXXXXXXXXXPRPEGEEKVEDIQVLLSSDAHSSNLRELKSETVSRLVKIPGI 150
P + + + V L + + +REL ++ V LV+I G
Sbjct: 80 VYPFMCEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKVRELSADKVGGLVRIAGQ 139
Query: 151 VISASGIKAKATKISIQCRSCRNVIPNLPVKPGLEGYVMPRKC-NTEQSGRPKCPLDPYF 209
++ + + ++ C C + V+ Y P KC N + R + LD
Sbjct: 140 IVRTHPVHPELSRACFVCEDCG--VTTRDVQQQFR-YTQPTKCANPQCMNRTRFSLDV-- 194
Query: 210 IIPDKCKCIDYQVLKLQEAPESIPQGEMPRHLTVYCDRTLCERVAPGARVTVLG-IYSIK 268
+ +D+Q +++QE +P+G +PR + V + E V PG + ++G + I
Sbjct: 195 ---NSSTFVDFQKIRIQETQAELPRGSIPRTVDVIVRGEMVETVQPGDKCDIVGTLIVIP 251
Query: 269 KIAKVGREG 277
IA++ G
Sbjct: 252 DIAQLSTPG 260
Score = 35.9 bits (79), Expect = 0.093
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 549 ITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRLFQVS 588
ITVRQLE++VR+SE+LA++ HV +A L S
Sbjct: 619 ITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELLNKS 658
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 219 bits (534), Expect = 7e-57
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 4/238 (1%)
Query: 309 TAEEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGGSRKRLPD-GLTRRG 367
+ E+ ++++ I + I S+ P+++G ++K + +L GG K+ D G + RG
Sbjct: 36 STEDRATLKKMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLMLLGGVAKKSRDEGTSLRG 95
Query: 368 DINILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIRDPGSRNFVMEGGA 427
DIN+ L+GDP TAKSQ+LK VE+ +P +YTSGK SSAAGLTA+V++D S FV+E GA
Sbjct: 96 DINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGA 155
Query: 428 MVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFG 487
++LAD GV CIDEFDKM D+VAIHEAMEQQTISI KAG+ TLN+R S+LAAAN V G
Sbjct: 156 LMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLNARASILAAANPVNG 215
Query: 488 RWDDTK-ADDNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYVLMRTGALQHERQAD 542
R+D ++ N+ I+SRFD+ F++ DE ++ D IAR +L A+ + D
Sbjct: 216 RYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECNEVTDYAIARRILDNHRAISEHTERD 273
Score = 35.9 bits (79), Expect = 0.093
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 549 ITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRLFQVS 588
ITVRQLE++VR+SE+LA++ HV +A L S
Sbjct: 325 ITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELLNKS 364
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 219 bits (534), Expect = 7e-57
Identities = 114/238 (47%), Positives = 160/238 (67%), Gaps = 4/238 (1%)
Query: 309 TAEEEEQFRRLAASPDIYERIGKSIAPSVFGAVDMKKAIACLLFGGSRKRLPD-GLTRRG 367
+ E+ ++++ I + I S+ P+++G ++K + +L GG K+ D G + RG
Sbjct: 330 STEDRATLKKMSDDKKIEKNIVDSLFPNIYGNHEVKLGVLLMLLGGVAKKSRDEGTSLRG 389
Query: 368 DINILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAGLTASVIRDPGSRNFVMEGGA 427
DIN+ L+GDP TAKSQ+LK VE+ +P +YTSGK SSAAGLTA+V++D S FV+E GA
Sbjct: 390 DINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASSAAGLTAAVVKDEESFEFVIEAGA 449
Query: 428 MVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFG 487
++LAD GV CIDEFDKM D+VAIHEAMEQQTISI KAG+ TLN+R S+LAAAN V G
Sbjct: 450 LMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISITKAGVKATLNARASILAAANPVNG 509
Query: 488 RWDDTK-ADDNIDFMPTILSRFDMIFIVKDEHDQNRD--IARYVLMRTGALQHERQAD 542
R+D ++ N+ I+SRFD+ F++ DE ++ D IAR +L A+ + D
Sbjct: 510 RYDRSRPLKYNVQMSAPIMSRFDLFFVLVDECNEVTDYAIARRILDNHRAISEHTERD 567
Score = 66.5 bits (155), Expect = 6e-11
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 10/249 (4%)
Query: 31 VKKKFKEFMRQFHTGNFNYKYRDALKRNYNLNQYWVEINIEDLSSFDDVLAEKLYKKPTE 90
V+ +F +F++ F + Y+ A+K + + IN++ L F + LA + +
Sbjct: 20 VQNEFSKFLKSFKDQKNEFIYKSAMKELVQPEKNTIFINMQHLYKFSNNLATTIELQYYR 79
Query: 91 HLPIXXXXXXXXXXXXXXPRPEGEEKVEDIQVLLSSDAHSSNLRELKSETVSRLVKIPGI 150
P + + + V L + + +REL ++ V LV+I G
Sbjct: 80 VYPFMCEALHLATLDACDESERQQMFKKQLYVSLFNLDAKTKVRELSADKVGGLVRIAGQ 139
Query: 151 VISASGIKAKATKISIQCRSCRNVIPNLPVKPGLEGYVMPRKC-NTEQSGRPKCPLDPYF 209
++ + + ++ C C + V+ Y P KC N + R + LD
Sbjct: 140 IVRTHPVHPELSRACFVCEDCG--VTTRDVQQQFR-YTQPTKCANPQCMNRTRFSLDV-- 194
Query: 210 IIPDKCKCIDYQVLKLQEAPESIPQGEMPRHLTVYCDRTLCERVAPGARVTVLG-IYSIK 268
+ +D+Q +++QE +P+G +PR + V + E V PG + ++G + I
Sbjct: 195 ---NSSTFVDFQKIRIQETQAELPRGSIPRTVDVIVRGEMVETVQPGDKCDIVGTLIVIP 251
Query: 269 KIAKVGREG 277
IA++ G
Sbjct: 252 DIAQLSTPG 260
Score = 35.9 bits (79), Expect = 0.093
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 549 ITVRQLEAIVRISESLAKMQLQPFATEAHVNEALRLFQVS 588
ITVRQLE++VR+SE+LA++ HV +A L S
Sbjct: 619 ITVRQLESLVRLSEALARLHCGKEVLVEHVEKAAELLNKS 658
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 33.1 bits (72), Expect = 0.66
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 454 EAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDDTKADDNIDFMPTILSRFDMIFI 513
EA+ T++I ITTTL R S A +D ++ D++ T+L F +F
Sbjct: 156 EALVTSTLNIRGNKITTTLRPRTSPYKRAGDASMSREDLRSPDSVSTFTTVLHVFHKVFQ 215
Query: 514 VKDEHD--QNRDIARYVLMRTGALQHERQADKR 544
V + +NR R ++ +L+ +A+++
Sbjct: 216 VAATYTIRENRS-ERQTKVKLESLERRLKANEK 247
>Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical
protein T14G10.1 protein.
Length = 652
Score = 31.1 bits (67), Expect = 2.7
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 427 AMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTL 472
A + AD G++C+ F ++DR+ + E + + + ++TTL
Sbjct: 121 AKLFADSGMICLAAFISPFQEDRLDARKIHESENVKFIEVHVSTTL 166
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 30.3 bits (65), Expect = 4.6
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 370 NILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGS-SAAGLTASVIRDPGSRNFVMEGGAM 428
N+LL+G G K+ L + + +V + + S + AG + + GG +
Sbjct: 143 NVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNV 202
Query: 429 VLADGGVVCIDEFDKM 444
A G+V +DE DK+
Sbjct: 203 EKAQQGIVFLDEVDKI 218
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 30.3 bits (65), Expect = 4.6
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 370 NILLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGS-SAAGLTASVIRDPGSRNFVMEGGAM 428
N+LL+G G K+ L + + +V + + S + AG + + GG +
Sbjct: 259 NVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNV 318
Query: 429 VLADGGVVCIDEFDKM 444
A G+V +DE DK+
Sbjct: 319 EKAQQGIVFLDEVDKI 334
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 29.5 bits (63), Expect = 8.1
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 291 RAVGLTAEEG----VTSGLR--PFTAEEEEQFRRLAASP--DIYERIGKSIAPSVFGAVD 342
+A+G+ E G SGLR P +E L S + IG + + GA
Sbjct: 267 KAMGMDTEGGGKDEKMSGLRAEPTLKHFDENIISLIESEIMSVNNEIGWADVAGLEGAKK 326
Query: 343 MKKAIACLLFGGSRKRLPDGLT--RRGDINILLLGDPGTAKSQLLKFVEKVAPIGVYTSG 400
+ I L F KR PD T R +LL G PGT K+ + + V +
Sbjct: 327 ALREIVVLPF----KR-PDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQCKATFF--- 378
Query: 401 KGSSAAGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAME--Q 458
SA+ LT+ + + G + L V+ IDE D + + HE+ +
Sbjct: 379 -NISASSLTSKWVGE-GEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIK 436
Query: 459 QTISIAKAGITTTLNSRCSVLAAAN 483
+ G+ T + R VL A N
Sbjct: 437 TEFLVQLDGVNTAPDERLLVLGATN 461
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,657,785
Number of Sequences: 27539
Number of extensions: 659710
Number of successful extensions: 1521
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1461
Number of HSP's gapped (non-prelim): 31
length of query: 675
length of database: 12,573,161
effective HSP length: 86
effective length of query: 589
effective length of database: 10,204,807
effective search space: 6010631323
effective search space used: 6010631323
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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