GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005149-TA|BGIBMGA005149-PA|undefined
         (192 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.                39   0.013
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.             39   0.013
D89629-1|BAB46925.1|  815|Homo sapiens cerebral protein-12 protein.    38   0.017
D83018-1|BAA11681.1|  816|Homo sapiens nel-related protein 2 pro...    38   0.017
BC020544-1|AAH20544.1|  816|Homo sapiens NELL2 protein protein.        38   0.017
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.                36   0.067

>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
          Length = 1283

 Score = 38.7 bits (86), Expect = 0.013
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 70  CDCRPAHLYHPGTDKCWPAFRQGPCEVGQYLVLPQNSVIPVCEQNPCNTDTLVQLNGNCE 129
           C C PA  +      C PA ++ PC     ++ P   V        C    L  L  + +
Sbjct: 692 CTC-PAGTFLNDAGACVPA-QECPCYAHGTVLAPGEVVHDEGAVCSCTGGKLSCLGASLQ 749

Query: 130 K-LGSIAPCNHLYPVSSSLGVNSTTLVVSCVTLSLETRFTEVI-GVLCPPGSRRSVNGKC 187
           K  G  AP  +L   +SS G      + SC TL +    T  + G +CPPG     +G C
Sbjct: 750 KSTGCAAPMVYLDCSNSSAGTPGAECLRSCHTLDVGCFSTHCVSGCVCPPGLVSDGSGGC 809

Query: 188 V 188
           +
Sbjct: 810 I 810


>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
          Length = 1594

 Score = 38.7 bits (86), Expect = 0.013
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 70  CDCRPAHLYHPGTDKCWPAFRQGPCEVGQYLVLPQNSVIPVCEQNPCNTDTLVQLNGNCE 129
           C C PA  +      C PA ++ PC     ++ P   V        C    L  L  + +
Sbjct: 733 CTC-PAGTFLNDAGACVPA-QECPCYAHGTVLAPGEVVHDEGAVCSCTGGKLSCLGASLQ 790

Query: 130 K-LGSIAPCNHLYPVSSSLGVNSTTLVVSCVTLSLETRFTEVI-GVLCPPGSRRSVNGKC 187
           K  G  AP  +L   +SS G      + SC TL +    T  + G +CPPG     +G C
Sbjct: 791 KSTGCAAPMVYLDCSNSSAGTPGAECLRSCHTLDVGCFSTHCVSGCVCPPGLVSDGSGGC 850

Query: 188 V 188
           +
Sbjct: 851 I 851


>D89629-1|BAB46925.1|  815|Homo sapiens cerebral protein-12 protein.
          Length = 815

 Score = 38.3 bits (85), Expect = 0.017
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 66  DDWICDCRPAHLYHPGTDKCWPAFRQGPC-EVG-QYLVLPQNSVIPVCEQNPCNTDTL 121
           D W+ +C+         D CWP     PC +V  ++ +LP+N   P C  +PC  DT+
Sbjct: 712 DTWVQNCQQCRCLQGEVD-CWPL----PCPDVECEFSILPENECCPRCVTDPCQADTI 764


>D83018-1|BAA11681.1|  816|Homo sapiens nel-related protein 2
           protein.
          Length = 816

 Score = 38.3 bits (85), Expect = 0.017
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 66  DDWICDCRPAHLYHPGTDKCWPAFRQGPC-EVG-QYLVLPQNSVIPVCEQNPCNTDTL 121
           D W+ +C+         D CWP     PC +V  ++ +LP+N   P C  +PC  DT+
Sbjct: 713 DTWVQNCQQCRCLQGEVD-CWPL----PCPDVECEFSILPENECCPRCVTDPCQADTI 765


>BC020544-1|AAH20544.1|  816|Homo sapiens NELL2 protein protein.
          Length = 816

 Score = 38.3 bits (85), Expect = 0.017
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%)

Query: 66  DDWICDCRPAHLYHPGTDKCWPAFRQGPC-EVG-QYLVLPQNSVIPVCEQNPCNTDTL 121
           D W+ +C+         D CWP     PC +V  ++ +LP+N   P C  +PC  DT+
Sbjct: 713 DTWVQNCQQCRCLQGEVD-CWPL----PCPDVECEFSILPENECCPRCVTDPCQADTI 765


>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
          Length = 1321

 Score = 36.3 bits (80), Expect = 0.067
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 4/121 (3%)

Query: 70  CDCRPAHLYHPGTDKCWPAFRQGPCEVGQYLVLPQNSVIPVCEQNPCNTDTLVQLNGNCE 129
           C C PA  +      C PA ++ PC     ++ P   V        C    L  L  + +
Sbjct: 731 CTC-PAGTFLNDAGACVPA-QKCPCYAHGTVLAPGEVVHDEGAVCSCTGGKLSCLGASLQ 788

Query: 130 K-LGSIAPCNHLYPVSSSLGVNSTTLVVSCVTLSLETRFTEVI-GVLCPPGSRRSVNGKC 187
           K  G  AP  +L   +SS G        SC TL +    T  + G +CPPG     +G C
Sbjct: 789 KSTGCAAPMVYLDCSNSSAGTLGAECDGSCHTLDVGCFSTHCVSGCVCPPGLVSDGSGGC 848

Query: 188 V 188
           +
Sbjct: 849 I 849


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.138    0.453 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,640,382
Number of Sequences: 224733
Number of extensions: 1472175
Number of successful extensions: 2522
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2519
Number of HSP's gapped (non-prelim): 9
length of query: 192
length of database: 73,234,838
effective HSP length: 86
effective length of query: 106
effective length of database: 53,907,800
effective search space: 5714226800
effective search space used: 5714226800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)