GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005149-TA|BGIBMGA005149-PA|undefined
         (192 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    23   1.9  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    23   1.9  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    23   1.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.6  

>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 74  PAHLYHPGTDKCWPAFRQGPCEVGQYLVLPQNSVIPVC 111
           P HL HPG D     +   P ++ +Y       V PVC
Sbjct: 383 PQHLIHPGKD-INKLYGMTPSDIDKY----SRIVFPVC 415


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 74  PAHLYHPGTDKCWPAFRQGPCEVGQYLVLPQNSVIPVC 111
           P HL HPG D     +   P ++ +Y       V PVC
Sbjct: 383 PQHLIHPGKD-INKLYGMTPSDIDKY----SRIVFPVC 415


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 74  PAHLYHPGTDKCWPAFRQGPCEVGQYLVLPQNSVIPVC 111
           P HL HPG D     +   P ++ +Y       V PVC
Sbjct: 321 PQHLIHPGKD-INKLYGMTPSDIDKY----SRIVFPVC 353


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 115 PCNTDTLVQLNGNCEKLGSIAPCNHLYPVSSSLGVNSTTLVVSCVTLSL 163
           P   D L Q+NG    L +I     L+    S+ V      ++C T+ L
Sbjct: 280 PDRIDILSQINGILGSLVAITGGCFLFRAWESIIVGMIGAFITCFTMPL 328


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 143 VSSSLGVNSTTLVVSCVTLSLETRFTEVIG 172
           +   + VN+TT   + VTLS++    EV G
Sbjct: 168 IPHDIAVNTTTEKGALVTLSVQLLSCEVNG 197


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 156 VSCVTLSLETRFTEVIGVLCPPGSRRSVN 184
           V    LS E   ++ + ++CP G R  +N
Sbjct: 593 VPLTALSEEGVQSKDLALICPDGGRAEIN 621


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 156 VSCVTLSLETRFTEVIGVLCPPGSRRSVN 184
           V    LS E   ++ + ++CP G R  +N
Sbjct: 593 VPLTALSEEGVQSKDLALICPDGGRAEIN 621


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 156 VSCVTLSLETRFTEVIGVLCPPGSRRSVN 184
           V    LS E   ++ + ++CP G R  +N
Sbjct: 593 VPLTALSEEGVQSKDLALICPDGGRAEIN 621


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)

Query: 159 VTLSLETRFTEVIGVLCPPG 178
           +TL++E+   ++  +L PPG
Sbjct: 114 ITLNIESTSNKMTVILTPPG 133


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.138    0.453 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,357
Number of Sequences: 429
Number of extensions: 3086
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 192
length of database: 140,377
effective HSP length: 54
effective length of query: 138
effective length of database: 117,211
effective search space: 16175118
effective search space used: 16175118
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)