GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005141-TA|BGIBMGA005141-PA|undefined
         (133 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.     30   2.2  
BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein.        29   3.8  
BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein.        29   3.8  
X63692-1|CAA45219.1| 1616|Homo sapiens DNA (cytosine-5-)-methylt...    28   8.7  
AL512764-1|CAC21681.1|  793|Homo sapiens hypothetical protein pr...    28   8.7  
AC010077-1|AAD54507.1|  966|Homo sapiens MTDM_HUMAN [AA 1- 966] ...    28   8.7  
AB209413-1|BAD92650.1| 1606|Homo sapiens DNA (cytosine-5-)-methy...    28   8.7  

>AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.
          Length = 2469

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 10   KLTDRTALGLCHLGAKLKPGIRRECADGEGATFDGLLRAATDGGVRAYRANSALTSYCVT 69
            +L   T  G+     K KPG     + G G+   G     T GG +   A+  L S   T
Sbjct: 2226 ELARGTENGMKPATPKAKPG---PSSQGSGSPRPG---TKTGGGSQPQPASGQLQSETAT 2279

Query: 70   TPAPPLLASRATRCARFPS 88
            TPA P   SR+    R P+
Sbjct: 2280 TPAKPSFPSRSPAPERLPA 2298


>BC126227-1|AAI26228.1| 1632|Homo sapiens DNMT1 protein protein.
          Length = 1632

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 47  RAATDGGVRAYRANSALTSYCV---TTPAP-PLLASRATRCARFPSHHRRALPARKLPQP 102
           R+ +DG  +  R   A  S        P+P P +  ++TR     SH  +  PA++ PQ 
Sbjct: 140 RSKSDGEAKRSRDPPASASQVTGIRAEPSPSPRITRKSTRQTTITSHFAKG-PAKRKPQE 198

Query: 103 ISSVRSSKGLIYRQDQSRDTDSFRLLRR 130
            S    S   I  +D+ +D    R+  R
Sbjct: 199 ESERAKSDESIKEEDKDQDEKRRRVTSR 226


>BC092517-1|AAH92517.1| 1511|Homo sapiens DNMT1 protein protein.
          Length = 1511

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 47  RAATDGGVRAYRANSALTSYCV---TTPAP-PLLASRATRCARFPSHHRRALPARKLPQP 102
           R+ +DG  +  R   A  S        P+P P +  ++TR     SH  +  PA++ PQ 
Sbjct: 19  RSKSDGEAKRSRDPPASASQVTGIRAEPSPSPRITRKSTRQTTITSHFAKG-PAKRKPQE 77

Query: 103 ISSVRSSKGLIYRQDQSRDTDSFRLLRR 130
            S    S   I  +D+ +D    R+  R
Sbjct: 78  ESERAKSDESIKEEDKDQDEKRRRVTSR 105


>X63692-1|CAA45219.1| 1616|Homo sapiens DNA
           (cytosine-5-)-methyltransferase protein.
          Length = 1616

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 71  PAP-PLLASRATRCARFPSHHRRALPARKLPQPISSVRSSKGLIYRQDQSRDTDSFRLLR 129
           P+P P +  ++TR     SH  +  PA++ PQ  S    S   I  +D+ +D    R+  
Sbjct: 151 PSPSPRITRKSTRQTTITSHFAKG-PAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTS 209

Query: 130 R 130
           R
Sbjct: 210 R 210


>AL512764-1|CAC21681.1|  793|Homo sapiens hypothetical protein
           protein.
          Length = 793

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 63  LTSYC-VTTPAPPLLASRATRCARFPSHHRRALPARKLP 100
           L  +C    PAP     RA R AR  + H RALP    P
Sbjct: 689 LRGHCRAAVPAPAAHRRRAGRPARTQARHHRALPGPLAP 727


>AC010077-1|AAD54507.1|  966|Homo sapiens MTDM_HUMAN [AA 1- 966]
           protein.
          Length = 966

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 71  PAP-PLLASRATRCARFPSHHRRALPARKLPQPISSVRSSKGLIYRQDQSRDTDSFRLLR 129
           P+P P +  ++TR     SH  +  PA++ PQ  S    S   I  +D+ +D    R+  
Sbjct: 30  PSPSPRITRKSTRQTTITSHFAKG-PAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTS 88

Query: 130 R 130
           R
Sbjct: 89  R 89


>AB209413-1|BAD92650.1| 1606|Homo sapiens DNA
           (cytosine-5-)-methyltransferase 1 variant protein.
          Length = 1606

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 71  PAP-PLLASRATRCARFPSHHRRALPARKLPQPISSVRSSKGLIYRQDQSRDTDSFRLLR 129
           P+P P +  ++TR     SH  +  PA++ PQ  S    S   I  +D+ +D    R+  
Sbjct: 138 PSPSPRITRKSTRQTTITSHFAKG-PAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTS 196

Query: 130 R 130
           R
Sbjct: 197 R 197


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.324    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,121,750
Number of Sequences: 224733
Number of extensions: 744849
Number of successful extensions: 2297
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2295
Number of HSP's gapped (non-prelim): 8
length of query: 133
length of database: 73,234,838
effective HSP length: 82
effective length of query: 51
effective length of database: 54,806,732
effective search space: 2795143332
effective search space used: 2795143332
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)