Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005134-TA|BGIBMGA005134-PA|undefined
(123 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM051005-1|CAJ19542.1| 104|Homo sapiens immunoglobulin heavy ch... 32 0.44
AY626664-1|AAV30676.1| 123|Homo sapiens immunoglobulin heavy ch... 32 0.58
AF062128-1|AAC18164.1| 122|Homo sapiens immunoglobulin heavy ch... 31 0.77
AY607421-1|AAT02034.1| 111|Homo sapiens immunoglobulin heavy ch... 31 1.0
AY950791-1|AAY25173.1| 121|Homo sapiens immunoglobulin gamma he... 31 1.3
AK127527-1|BAC87020.1| 134|Homo sapiens protein ( Homo sapiens ... 31 1.3
DQ926028-1|ABI50693.1| 121|Homo sapiens immunoglobulin heavy ch... 30 1.8
DQ926421-1|ABK81588.1| 113|Homo sapiens immunoglobulin heavy ch... 29 3.1
AJ627972-1|CAF31318.1| 119|Homo sapiens immunoglobulin heavy ch... 29 3.1
AJ627967-1|CAF31313.1| 119|Homo sapiens immunoglobulin heavy ch... 29 3.1
AJ627960-1|CAF31306.1| 119|Homo sapiens immunoglobulin heavy ch... 29 3.1
AJ506445-1|CAD44680.1| 85|Homo sapiens immunoglobulin heavy ch... 29 3.1
AF174013-1|AAD53760.1| 144|Homo sapiens immunoglobulin heavy ch... 29 3.1
AJ556674-1|CAD89401.1| 125|Homo sapiens immunoglobulin gamma he... 29 4.1
U80123-1|AAC51038.1| 123|Homo sapiens immunoglobulin heavy chai... 29 5.4
AY607337-1|AAT01959.1| 113|Homo sapiens immunoglobulin heavy ch... 29 5.4
AJ300804-1|CAC28909.1| 124|Homo sapiens immunoglobulin gamma he... 29 5.4
AJ222577-1|CAA10845.1| 117|Homo sapiens IgM protein. 29 5.4
AF303917-1|AAG40827.1| 105|Homo sapiens immunoglobulin heavy ch... 29 5.4
DQ168450-1|ABA56163.1| 394|Homo sapiens signal peptide peptidas... 28 7.2
BC062595-1|AAH62595.1| 377|Homo sapiens histocompatibility (min... 28 7.2
BC008959-1|AAH08959.1| 377|Homo sapiens histocompatibility (min... 28 7.2
BC008938-1|AAH08938.1| 377|Homo sapiens histocompatibility (min... 28 7.2
AY169312-1|AAO12537.1| 426|Homo sapiens intramembrane protease ... 28 7.2
AY169311-1|AAO12536.1| 377|Homo sapiens intramembrane protease ... 28 7.2
AY169310-1|AAO12535.1| 394|Homo sapiens intramembrane protease ... 28 7.2
AL121751-8|CAI19154.2| 426|Homo sapiens histocompatibility (min... 28 7.2
AL121751-7|CAI19153.1| 377|Homo sapiens histocompatibility (min... 28 7.2
AL110115-6|CAI20174.1| 377|Homo sapiens histocompatibility (min... 28 7.2
AL110115-5|CAI20175.2| 426|Homo sapiens histocompatibility (min... 28 7.2
AK075283-1|BAC11519.1| 377|Homo sapiens protein ( Homo sapiens ... 28 7.2
AJ420895-1|CAD13132.1| 377|Homo sapiens signal peptide peptidas... 28 7.2
AJ345029-1|CAC87790.1| 377|Homo sapiens presenilin-like protein... 28 7.2
AJ245006-1|CAB44140.1| 121|Homo sapiens immunoglobulin mu heavy... 28 7.2
AF515663-1|AAN77099.1| 377|Homo sapiens putative presenilin-lik... 28 7.2
AF483215-1|AAM22076.1| 377|Homo sapiens minor histocompatibilit... 28 7.2
AF174049-1|AAD53795.1| 124|Homo sapiens immunoglobulin heavy ch... 28 7.2
DQ524000-1|ABI35512.1| 125|Homo sapiens immunoglobulin heavy ch... 28 9.5
DQ523881-1|ABI35393.1| 93|Homo sapiens immunoglobulin heavy ch... 28 9.5
AJ233709-1|CAC29397.1| 124|Homo sapiens immunoglobulin G heavy ... 28 9.5
AF301516-1|AAG33822.1| 105|Homo sapiens immunoglobulin heavy ch... 28 9.5
>AM051005-1|CAJ19542.1| 104|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 104
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEA 93
G W W+ P G W G + S + +L + + I T+ +Q L VTA +
Sbjct: 15 GYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLRLKSVTAADT 74
Query: 94 SAYEQALAEYDDTGTSDDWDFGI 116
+ Y A EY G+ DW F +
Sbjct: 75 AVYYCASKEYCSAGSCYDWYFDL 97
>AY626664-1|AAV30676.1| 123|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 123
Score = 31.9 bits (69), Expect = 0.58
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDGEDF---ALHA-MPIMHHTNVSQACSMLDGVTAYEAS 94
WGWV P G W G + + DG F +L + + I T+ S+ L VTA + +
Sbjct: 36 WGWVRQPPGKGLEWIGSIHY--DGSTFYNPSLKSRVTISGDTSKSEFSVKLSSVTAADTA 93
Query: 95 AYEQALAEYDDTGTS--DDWDFG 115
Y A YD +G+ D W G
Sbjct: 94 VYYCARTYYDASGSPYFDHWGQG 116
>AF062128-1|AAC18164.1| 122|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 122
Score = 31.5 bits (68), Expect = 0.77
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDGEDF---ALHA-MPIMHHTNVSQACSMLDGVTAYEAS 94
WGW+ P G W G + +S G F +L + + I T+ SQ L+ VTA + +
Sbjct: 36 WGWIRQPPGKGLEWIGYIYYS--GSTFYNPSLKSRVTISVDTSKSQFSLRLNSVTAADTA 93
Query: 95 AYEQALAEYDDTGTSDDWDFG 115
Y A Y G D W G
Sbjct: 94 VYYCARRGYSGYGAFDYWGQG 114
>AY607421-1|AAT02034.1| 111|Homo sapiens immunoglobulin heavy chain
CDR3 protein.
Length = 111
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 42 WGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEASAY 96
W W+ P G W G + +S + +L + + I T+ +Q L VTA + + Y
Sbjct: 26 WSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVY 85
Query: 97 EQALAEYDDTGTSDDWDFG 115
A EY +G+ D W G
Sbjct: 86 YCARGEYYGSGSLDYWGQG 104
>AY950791-1|AAY25173.1| 121|Homo sapiens immunoglobulin gamma heavy
chain variable region protein.
Length = 121
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWSQDGE-DFALHAMPIMH-HTNVSQACSMLDGVTAYEA 93
G WGW+ P G W G + ++ + + +L + M T+ +Q L VTA +
Sbjct: 33 GYYWGWIRQPPGKGLEWIGSVYYNGNTYYNPSLQSRLTMSADTSKNQLSLSLTSVTAADT 92
Query: 94 SAYEQALAEYDDTGTSDDWDFG 115
+ Y A + Y +G D+W G
Sbjct: 93 AVYYCARSTYWGSGDFDNWGQG 114
>AK127527-1|BAC87020.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ45620 fis, clone BRTHA3027638. ).
Length = 134
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 35 QLAWGQGW-GWVTLPNGVWSGRLTWSQDG 62
QL WGQGW GWV P+ S R + DG
Sbjct: 29 QLPWGQGWGGWVKAPDA--SARCPRAADG 55
>DQ926028-1|ABI50693.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDGEDF---ALHAMPIMH-HTNVSQACSMLDGVTAYEAS 94
WGW+ P G W G + +S G F +L + M T+ +Q L+ VTA + +
Sbjct: 36 WGWIRQPPGKGLEWIGSIHYS--GSTFYNPSLESRVTMSADTSKNQVSLKLNSVTAADTA 93
Query: 95 AYEQALAEYDDTGTS-DDWDFG 115
Y A + D+G+ D W G
Sbjct: 94 VYYCARSRPHDSGSCFDYWGXG 115
>DQ926421-1|ABK81588.1| 113|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 113
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEA 93
G W W+ P G W G + S + +L + + I T+ +Q L VTA +
Sbjct: 31 GYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADT 90
Query: 94 SAYEQALAEYDDTGTSDDWDFG 115
+ Y A TG +D W G
Sbjct: 91 AVYYCARGALQTTGPADYWGQG 112
>AJ627972-1|CAF31318.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 42 WGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEASAY 96
W W+ P G W G + S D +L + + I T+ +Q L VTA + + Y
Sbjct: 34 WSWIRQPPGKGLEWIGEINPSGSTNYDPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVY 93
Query: 97 EQALAEYDDTGTSDDWDFG 115
A D +G +D W G
Sbjct: 94 YCARGGGDSSGYTDYWGQG 112
>AJ627967-1|CAF31313.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 42 WGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEASAY 96
W W+ P G W G + S D +L + + I T+ +Q L VTA + + Y
Sbjct: 34 WSWIRQPPGKGLEWIGEINPSGSTNYDPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVY 93
Query: 97 EQALAEYDDTGTSDDWDFG 115
A D +G +D W G
Sbjct: 94 YCARGGGDSSGYTDYWGQG 112
>AJ627960-1|CAF31306.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 42 WGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEASAY 96
W W+ P G W G + S D +L + + I T+ +Q L VTA + + Y
Sbjct: 34 WSWIRQPPGKGLEWIGEINPSGSTNYDPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVY 93
Query: 97 EQALAEYDDTGTSDDWDFG 115
A D +G +D W G
Sbjct: 94 YCARGGGDSSGYTDYWGQG 112
>AJ506445-1|CAD44680.1| 85|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 85
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDGEDF---ALHA-MPIMHHTNVSQACSMLDGVTAYEAS 94
WGW+ P G W G L +S G F +L + + I T+ +Q L VTA + +
Sbjct: 3 WGWIRQPPGKGLEWIGSLYYS--GSTFYNPSLKSRVTIYADTSKNQFSLKLTSVTAADTA 60
Query: 95 AYEQALAEYDDTGTSDDWDFGID 117
Y E +G S W +G+D
Sbjct: 61 VYYCVRHEGYCSGHSCYWYYGMD 83
>AF174013-1|AAD53760.1| 144|Homo sapiens immunoglobulin heavy chain
variable region precursor protein.
Length = 144
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 42 WGWVTLPNGV---WSGRL-TWSQDGEDFALHAMPIMH-HTNVSQACSMLDGVTAYEASAY 96
W W+ P G W GR+ T + +L + M T+ +Q L VTA + + Y
Sbjct: 53 WSWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVY 112
Query: 97 EQALAEYDDTGTSDDWDF 114
A YD +G D+ F
Sbjct: 113 YCARNYYDSSGYRMDYYF 130
>AJ556674-1|CAD89401.1| 125|Homo sapiens immunoglobulin gamma heavy
chain variable region protein.
Length = 125
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDGEDF---ALHA-MPIMHHTNVSQACSMLDGVTAYEAS 94
WGW+ P G W G + + DG + +L + + I T+ + L VTA + +
Sbjct: 36 WGWIRQPPGKGLEWIGTVYY--DGSSYYNPSLKSRVTISVDTSKNHFSLRLSSVTAADTA 93
Query: 95 AYEQALAEYDDTGTSDDW 112
Y A +Y + ++ DW
Sbjct: 94 VYYCARLQYGSSWSTGDW 111
>U80123-1|AAC51038.1| 123|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 123
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDG--EDFALHAMPIMHHTNVSQACSMLDGVTAYEASAY 96
WGW+ P G W G + +S + I T +Q L VTA + + Y
Sbjct: 36 WGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTPKNQFSLKLSSVTAADTAVY 95
Query: 97 EQALAEYDDTGTS--DDWDFG 115
A YD +G + D W G
Sbjct: 96 YCARRAYDSSGYNWFDPWGQG 116
>AY607337-1|AAT01959.1| 113|Homo sapiens immunoglobulin heavy chain
CDR3 protein.
Length = 113
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEA 93
G W W+ P G W G + S + +L + + I T+ +Q L VTA +
Sbjct: 25 GYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADT 84
Query: 94 SAYEQALAEYDDTGTSDDWDFG 115
+ Y A+ TG D W G
Sbjct: 85 AVYYCAIRVMGATGWFDPWGQG 106
>AJ300804-1|CAC28909.1| 124|Homo sapiens immunoglobulin gamma heavy
chain variable region protein.
Length = 124
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEA 93
G W W+ P G W G + S + +L + + I T+ +Q L VTA +
Sbjct: 31 GYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADT 90
Query: 94 SAYEQALAEYDDTG--TSDDWD 113
+ Y A+ YD +G T D +D
Sbjct: 91 AVYYCAVYYYDSSGYQTGDAFD 112
>AJ222577-1|CAA10845.1| 117|Homo sapiens IgM protein.
Length = 117
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEA 93
G W W+ P G W G + S + +L + + I T+ +Q L VTA +
Sbjct: 28 GYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADT 87
Query: 94 SAYEQALAEYDDTGTSDDW 112
+ Y A YD +G + D+
Sbjct: 88 AVYYCARGYYDSSGYNFDY 106
>AF303917-1|AAG40827.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 42 WGWVTLPNGV---WSGRLTWS-QDGEDFALHAMPIMH-HTNVSQACSMLDGVTAYEASAY 96
W W+ P G W G + +S + +L + M T+ +Q L+ VTA + + Y
Sbjct: 18 WSWIRQPPGKGLEWIGYIFYSGSTNYNPSLKSRVTMSVDTSRNQFSLKLNSVTAADTAVY 77
Query: 97 EQALAEYDDTGTSDDWDFGI 116
A Y G+ DW F +
Sbjct: 78 YCARDRYCSGGSCFDWYFDL 97
>DQ168450-1|ABA56163.1| 394|Homo sapiens signal peptide peptidase
beta protein.
Length = 394
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>BC062595-1|AAH62595.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>BC008959-1|AAH08959.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>BC008938-1|AAH08938.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AY169312-1|AAO12537.1| 426|Homo sapiens intramembrane protease
isoform 3 protein.
Length = 426
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AY169311-1|AAO12536.1| 377|Homo sapiens intramembrane protease
isoform 1 protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AY169310-1|AAO12535.1| 394|Homo sapiens intramembrane protease
isoform 2 protein.
Length = 394
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AL121751-8|CAI19154.2| 426|Homo sapiens histocompatibility (minor)
13 protein.
Length = 426
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AL121751-7|CAI19153.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AL110115-6|CAI20174.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AL110115-5|CAI20175.2| 426|Homo sapiens histocompatibility (minor)
13 protein.
Length = 426
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AK075283-1|BAC11519.1| 377|Homo sapiens protein ( Homo sapiens
cDNA FLJ90802 fis, clone Y79AA1000226, highly similar to
Minor histocompatibility antigen H13 (EC3.4.99.-). ).
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AJ420895-1|CAD13132.1| 377|Homo sapiens signal peptide peptidase
protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AJ345029-1|CAC87790.1| 377|Homo sapiens presenilin-like protein 3
protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AJ245006-1|CAB44140.1| 121|Homo sapiens immunoglobulin mu heavy
chain variable region protein.
Length = 121
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDG--EDFALHAMPIMHHTNVSQACSMLDGVTAYEASAY 96
WGW+ P G W G + +S + I T+ +Q L VTA + + Y
Sbjct: 36 WGWIRQPPGKRLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVY 95
Query: 97 EQALAEYDDTGTSDDWDFG 115
A Y D D W G
Sbjct: 96 YCARLSYGDYWYFDLWGRG 114
>AF515663-1|AAN77099.1| 377|Homo sapiens putative presenilin-like
aspartyl protease protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AF483215-1|AAM22076.1| 377|Homo sapiens minor histocompatibility
antigen H13 isoform 1 protein.
Length = 377
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 62 GEDFALHAMPIMHHTNVSQACSMLDGVTAYE 92
G F+L+ + ++H NVS C +L G+ Y+
Sbjct: 189 GLAFSLNGVELLHLNNVSTGCILLGGLFIYD 219
>AF174049-1|AAD53795.1| 124|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 124
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEA 93
G W W+ P G W G + S + +L + + I T+ +Q L VTA +
Sbjct: 31 GYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADT 90
Query: 94 SAYEQALAEYDDTGTSDDWDFG 115
+ Y A YD +G D W G
Sbjct: 91 AVYYCARLYYDSSGL-DYWGQG 111
>DQ524000-1|ABI35512.1| 125|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 125
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 34 HQLAWGQGWGWVTLPNG---VWSGRL--TWSQDGEDFALHAMPIMHHTNVSQACSMLDGV 88
+ ++ G WGW+ P G W G + + S + I T+ +Q L V
Sbjct: 26 YSISSGYYWGWIRQPPGKGLEWIGSIYHSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSV 85
Query: 89 TAYEASAYEQALAEYDDTGTSDDW 112
TA + + + A +E + G S W
Sbjct: 86 TAADTAVHYCARSEGEGEGYSSSW 109
>DQ523881-1|ABI35393.1| 93|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 93
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 42 WGWVTLPNGV---WSGRLTWSQDG--EDFALHAMPIMHHTNVSQACSMLDGVTAYEASAY 96
WGW+ P G W G + +S + I T+ +Q L VTA + + Y
Sbjct: 8 WGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVY 67
Query: 97 EQALAEYDDTGTSDDWDFG 115
A+ T D W G
Sbjct: 68 YCAMLYCSSTSCYDYWGQG 86
>AJ233709-1|CAC29397.1| 124|Homo sapiens immunoglobulin G heavy
chain variable region protein.
Length = 124
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 34 HQLAWGQGWGWVTLPNG---VWSGRL--TWSQDGEDFALHAMPIMHHTNVSQACSMLDGV 88
+ L G WGW+ P G W G + + + D + I T+ +Q L+ V
Sbjct: 27 YSLGSGYNWGWIRQPPGKGLEWIGSIYDSGNSDYNPSLKSRVTISVDTSKNQVSLRLNSV 86
Query: 89 TAYEASAY 96
TA + + Y
Sbjct: 87 TAADTAVY 94
>AF301516-1|AAG33822.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 39 GQGWGWVTLPNGV---WSGRLTWS-QDGEDFALHA-MPIMHHTNVSQACSMLDGVTAYEA 93
G W W+ P G W G + +S + +L + + I T+ +Q L VTA +
Sbjct: 15 GYYWSWIRQPPGKGLEWIGYIYYSGSTNYNPSLKSRVTISVDTSENQFSLKLSSVTAADT 74
Query: 94 SAYEQALAEYDDTGTSDDWDFGI 116
+ Y A + G+ DW F +
Sbjct: 75 AVYYCARDRFCSGGSCFDWYFDL 97
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.134 0.448
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,667,363
Number of Sequences: 224733
Number of extensions: 876671
Number of successful extensions: 2640
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2622
Number of HSP's gapped (non-prelim): 41
length of query: 123
length of database: 73,234,838
effective HSP length: 81
effective length of query: 42
effective length of database: 55,031,465
effective search space: 2311321530
effective search space used: 2311321530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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