GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005133-TA|BGIBMGA005133-PA|undefined
         (80 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   2.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   2.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   4.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   4.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   7.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   7.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   7.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   10.0 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   10.0 

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 15  GKCLATQKYLVKESPEMLAIATWTGQVPKRPAL 47
           G C A   Y+V ++P  LA  T T  +  +  L
Sbjct: 461 GVCHADDAYMVVDTP-FLASTTTTNDIKMQKVL 492


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 15  GKCLATQKYLVKESPEMLAIATWTGQVPKRPAL 47
           G C A   Y+V ++P  LA  T T  +  +  L
Sbjct: 461 GVCHADDAYMVVDTP-FLASTTTTNDIKMQKVL 492


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 30  EMLAIATWTGQVPKRPALPLGAKVSQLMA 58
           ++  +  W   +P   +LPL  +V  L A
Sbjct: 241 QLFQLVAWAKHIPHFTSLPLEDQVLLLRA 269


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 30  EMLAIATWTGQVPKRPALPLGAKVSQLMA 58
           ++  +  W   +P   +LPL  +V  L A
Sbjct: 241 QLFQLVAWAKHIPHFTSLPLEDQVLLLRA 269


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.0 bits (37), Expect = 7.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 37  WTGQVPKRPAL 47
           W+G+  KRP L
Sbjct: 839 WSGEPSKRPLL 849


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.0 bits (37), Expect = 7.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 37  WTGQVPKRPAL 47
           W+G+  KRP L
Sbjct: 877 WSGEPSKRPLL 887


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.0 bits (37), Expect = 7.6
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 16  KCLATQKYLVKESPEMLAIATWTGQVP 42
           KC    K  ++    ++ + T TG+ P
Sbjct: 177 KCTVCSKTFIQSGQLVIHMRTHTGEKP 203


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)

Query: 59  LGSRRDPGNVVW 70
           +G  + PG VVW
Sbjct: 881 IGGLQHPGAVVW 892


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 13  ASGKCLATQKYLVKESPEMLAIATWTGQVPKR 44
           A+G   AT   +V  S    A+ T T  +P R
Sbjct: 233 ATGTGPATPSAVVATSNATAAMTTGTTTIPTR 264


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.129    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,101
Number of Sequences: 429
Number of extensions: 653
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 80
length of database: 140,377
effective HSP length: 47
effective length of query: 33
effective length of database: 120,214
effective search space:  3967062
effective search space used:  3967062
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
S2: 36 (18.6 bits)