GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005129-TA|BGIBMGA005129-PA|IPR013273|ADAM-TS,
IPR002223|Proteinase inhibitor I2, Kunitz metazoa,
IPR000884|Thrombospondin, type I, IPR010294|ADAM-TS Spacer 1
         (2102 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    31   0.13 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    31   0.13 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    30   0.17 

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
            protein.
          Length = 427

 Score = 30.7 bits (66), Expect = 0.13
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 1479 GETHATGPNLGG---CDCSTSKYGCCPDGQTLAEGPKFFGCTDIPENKQVACSLAKDRGS 1535
            G    +GPN  G     C ++     P GQ  A  P  +         +  CS+  DR S
Sbjct: 61   GNFSPSGPNSPGSFTAGCHSNLLSTSPSGQNKAVAP--YPPNHPLSGSKHLCSICGDRAS 118

Query: 1536 GRDYSVY 1542
            G+ Y VY
Sbjct: 119  GKHYGVY 125


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
            protein.
          Length = 427

 Score = 30.7 bits (66), Expect = 0.13
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 1479 GETHATGPNLGG---CDCSTSKYGCCPDGQTLAEGPKFFGCTDIPENKQVACSLAKDRGS 1535
            G    +GPN  G     C ++     P GQ  A  P  +         +  CS+  DR S
Sbjct: 61   GNFSPSGPNSPGSFTAGCHSNLLSTSPSGQNKAVAP--YPPNHPLSGSKHLCSICGDRAS 118

Query: 1536 GRDYSVY 1542
            G+ Y VY
Sbjct: 119  GKHYGVY 125


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 30.3 bits (65), Expect = 0.17
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 707  GSGTEIG-KGFLKKSRYLTSINNTTSI-KDCIVDQRRNNRVWHT 748
            G G  I   G L++S  L  +   TSI KDC+ D +R N++  T
Sbjct: 1280 GKGERIDMNGKLRQSPRLKELVGATSIIKDCVEDMKRGNKILRT 1323


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.137    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,463
Number of Sequences: 429
Number of extensions: 29357
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 5
length of query: 2102
length of database: 140,377
effective HSP length: 69
effective length of query: 2033
effective length of database: 110,776
effective search space: 225207608
effective search space used: 225207608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)