Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005127-TA|BGIBMGA005127-PA|IPR011598|Helix-loop-helix
DNA-binding, IPR001092|Basic helix-loop-helix dimerisation region bHLH
(234 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 25 0.60
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 0.79
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 0.79
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 0.79
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 25 0.79
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 0.79
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 25 0.79
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.79
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 25 0.79
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.79
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 0.79
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.79
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 0.79
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 25 0.79
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.79
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 24 1.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 1.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 1.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 1.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 1.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 1.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 1.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 1.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 1.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 1.8
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 7.4
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 21 9.8
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.60
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 49 EHTFSHKKYDKTISHHRSYVLEDYEPKRITYFRPHEFEPSNHEGPRYYEHEYVRDTVVGQ 108
E+ ++Y+K H+ L + R Y R E E ++++ R Y +Y
Sbjct: 11 EYKEKDRRYEKL--HNEKEKLLEERTSRKRYSRSREREQNSYKNEREYR-KY-------- 59
Query: 109 ETLNSESSLDYSQDSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMN 168
E+S + S+D ++ K+ + H I SL YKK C+ R ++N
Sbjct: 60 ----RETSKERSRDRKEREKSKE---HKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNIN 112
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
Score = 21.4 bits (43), Expect = 7.4
Identities = 13/63 (20%), Positives = 24/63 (38%)
Query: 128 KTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNRAFDLLRSKLPVTKPSKKK 187
K N HDT+L + + E + T+ + R R D + ++ ++
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRNRE 244
Query: 188 YSK 190
Y K
Sbjct: 245 YRK 247
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 24.6 bits (51), Expect = 0.79
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+DS D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDSKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.79
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+DS D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.4
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 49 EHTFSHKKYDKTISHHRSYVLEDYEPKRITYFRPHEFEPSNHEGPRYYEHEYVRDTVVGQ 108
E+ ++Y+K H+ L + R Y R E E ++++ R Y +Y
Sbjct: 11 EYKEKDRRYEKL--HNEKEKLLEERTSRKRYSRSREREQNSYKNEREYR-KY-------- 59
Query: 109 ETLNSESSLDYSQDSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMN 168
E+S + S+D ++ K+ + H I SL YKK C+ + ++N
Sbjct: 60 ----RETSKERSRDRKEREKSKE---HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.4
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 18/120 (15%)
Query: 49 EHTFSHKKYDKTISHHRSYVLEDYEPKRITYFRPHEFEPSNHEGPRYYEHEYVRDTVVGQ 108
E+ ++Y+K H+ L + R Y R E E ++++ R Y +Y
Sbjct: 11 EYKEKDRRYEKL--HNEKEKLLEERTSRKRYSRSREREQNSYKNEREYR-KY-------- 59
Query: 109 ETLNSESSLDYSQDSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMN 168
E+S + S+D ++ K+ + H I SL YKK C+ + ++N
Sbjct: 60 ----RETSKERSRDRKEREKSKE---HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 1.4
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
Score = 23.0 bits (47), Expect = 2.4
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 86 EPSNHEGPRYY-EHEYVRDTVVGQETLNSESSLDYSQDSQDNMKTND-DSNHDTILSLKE 143
E S +E +Y +R + +S S + S N + + D ++ + + KE
Sbjct: 201 EKSGNESKKYATSSNSLRSRTHDFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKE 260
Query: 144 RALQLEREYKKTACDRER 161
+ L+ K+ +C RER
Sbjct: 261 KLLEERTSRKRYSCSRER 278
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.8 bits (49), Expect = 1.4
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYS-QDSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSYHDEKFKQLRNEDNKIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 1.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 118 DYSQ-DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
+YS D + N+D+ D KE LQ RE +RER R M +
Sbjct: 7 NYSHHDEKFKQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKK 59
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMR 165
D + N+DS D KE LQ RE +RER R
Sbjct: 12 DEKFKQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQR 55
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 122 DSQDNMKTNDDSNHDTILSLKERALQLEREYKKTACDRERTRMRDMNR 169
D + N+D+ D KE LQ RE +RER R M +
Sbjct: 12 DEKFKQLRNEDNEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKK 59
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 71 DYEPKRITYFRPHEFEP 87
+YE RI YF E+ P
Sbjct: 115 EYECSRIDYFPNEEYSP 131
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 63 HHRSYVLEDYEPKRITYFRPHEFEPSNHEGPRYYE 97
HH+ + + ++ T E +P+ + YYE
Sbjct: 65 HHKFFQVHEWPVGNDTLKSKMEIDPATQKDAGYYE 99
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.132 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,283
Number of Sequences: 429
Number of extensions: 3831
Number of successful extensions: 32
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of query: 234
length of database: 140,377
effective HSP length: 56
effective length of query: 178
effective length of database: 116,353
effective search space: 20710834
effective search space used: 20710834
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)
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