Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005121-TA|BGIBMGA005121-PA|IPR005123|2OG-Fe(II)
oxygenase
(224 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 2.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.3
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 2.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 4.0
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 4.0
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 5.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 7.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.3
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.3
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 26 ITAIYYLNLDWDVKRYGGLLRVFPEGTNQVADIAPIFDRML 66
I AI+ +L W + G R PEG N A F+R L
Sbjct: 172 IIAIWLFSLGWTIAPMFGWNRYVPEG-NMTACGTDYFNRGL 211
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 2.3
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 95 AHEREEALRKYKERGQPSSTESNSEMRIQKTLSDMPILLAKKYSVEQPAFADELDSIDAN 154
+++ E RKY+ER + S + R ++ S P +++ S+ + ++ + N
Sbjct: 49 SYKNERKYRKYRERSKERSRD-----RTERERSREPKIIS---SLSNKTIHNN-NNYNNN 99
Query: 155 NLKCTSYKLNKLNNDRLLFSDI 176
N +Y N NN + L+ +I
Sbjct: 100 NYNNYNYNNNNYNNYKKLYYNI 121
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 23.0 bits (47), Expect = 2.3
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 26 ITAIYYLNLDWDVKRYGGLLRVFPEGTNQVADIAPIFDRML 66
I AI+ +L W + G R PEG N A F+R L
Sbjct: 48 IIAIWLFSLGWTIAPMFGWNRYVPEG-NMTACGTDYFNRGL 87
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic
acetylcholine receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 3.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 30 YYLNLDWDVKRYGGL 44
Y L WD K YGG+
Sbjct: 82 YDYKLKWDPKEYGGV 96
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 94 DAHEREEALRKYKERGQPSSTESNSEMR 121
++++ E+ RKY+ER + S + R
Sbjct: 48 NSYKNEKEYRKYRERSKERSRDKRERER 75
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 94 DAHEREEALRKYKERGQPSSTESNSEMR 121
++++ E+ RKY+ER + S + R
Sbjct: 48 NSYKNEKEYRKYRERSKERSRDKRERER 75
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 8 LGSHYVKHVDNPNKDGRCITAIYY 31
L ++Y+ ++ N N D +YY
Sbjct: 85 LSNNYISNISNYNNDNNYNKKLYY 108
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 70 SDRRNPHEVLFAYSTRYAITLWYFDAH 96
+ R NP + + YS RY + + + +H
Sbjct: 310 TQRDNPQILTYKYSKRYKMAVAFMLSH 336
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 94 DAHEREEALRKYKERGQPSSTESNSEMR 121
++++ E RKY+ER + S + R
Sbjct: 281 NSYKNEREYRKYRERSKERSRDRTERER 308
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Query: 32 LNLDWDVKRYGGL--LRVFP 49
+N+ W+V YGG+ LR+ P
Sbjct: 83 VNMRWNVSDYGGVRDLRIPP 102
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 95 AHEREEALRKYKERGQPSSTESNSEMR 121
+++ E RKY+ER + S + R
Sbjct: 49 SYKNERKYRKYRERSKERSRDRTERER 75
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.136 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,366
Number of Sequences: 429
Number of extensions: 3348
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 11
length of query: 224
length of database: 140,377
effective HSP length: 55
effective length of query: 169
effective length of database: 116,782
effective search space: 19736158
effective search space used: 19736158
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)
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