Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005108-TA|BGIBMGA005108-PA|IPR001275|DM DNA-binding
(169 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117245-1|AAI17246.1| 472|Homo sapiens doublesex and mab-3 rel... 85 9e-17
BC113584-1|AAI13585.1| 472|Homo sapiens doublesex and mab-3 rel... 85 9e-17
AL136365-2|CAB99336.1| 472|Homo sapiens doublesex and mab-3 rel... 85 9e-17
BC130437-1|AAI30438.1| 504|Homo sapiens DMRT-like family A1 pro... 77 4e-14
BC130435-1|AAI30436.1| 504|Homo sapiens DMRT-like family A1 pro... 77 4e-14
AL161730-1|CAH73857.1| 504|Homo sapiens DMRT-like family A1 pro... 77 4e-14
AK096011-1|BAC04672.1| 504|Homo sapiens protein ( Homo sapiens ... 77 4e-14
BC040847-1|AAH40847.1| 373|Homo sapiens doublesex and mab-3 rel... 76 7e-14
AY442915-1|AAR89620.1| 175|Homo sapiens doublesex and mab-3 rel... 76 7e-14
AY442914-1|AAR89619.1| 275|Homo sapiens doublesex and mab-3 rel... 76 7e-14
AL162131-1|CAB82427.1| 373|Homo sapiens human DMRT1 protein rel... 76 7e-14
AL136365-1|CAB99335.1| 373|Homo sapiens doublesex and mab-3 rel... 76 7e-14
AJ276801-1|CAB82851.1| 373|Homo sapiens doublesex and MAB-3 rel... 76 7e-14
AF130728-1|AAD40474.1| 373|Homo sapiens doublesex and mab-3 rel... 76 7e-14
AF193872-1|AAF78891.1| 57|Homo sapiens putative DM domain prot... 74 2e-13
AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM) do... 73 5e-13
Y19052-1|CAB59891.1| 226|Homo sapiens doublesex-like 2 protein ... 66 4e-11
BC039266-1|AAH39266.1| 367|Homo sapiens DMRT-like family C2 pro... 66 4e-11
BC030204-1|AAH30204.1| 226|Homo sapiens DMRT2 protein protein. 66 4e-11
BC029202-1|AAH29202.1| 367|Homo sapiens DMRT-like family C2 pro... 66 4e-11
AL358976-3|CAH70589.1| 561|Homo sapiens doublesex and mab-3 rel... 66 4e-11
AL358976-2|CAH70588.1| 226|Homo sapiens doublesex and mab-3 rel... 66 4e-11
AJ291669-1|CAC40652.1| 333|Homo sapiens Doublesex-mab-3 (DM) do... 66 4e-11
AF284225-1|AAF86295.1| 561|Homo sapiens DMRT2/terra-like protei... 66 4e-11
AF284224-1|AAF86293.1| 226|Homo sapiens DMRT2 protein. 66 4e-11
AF284223-1|AAF86291.1| 226|Homo sapiens DMRT2 protein. 66 4e-11
AF130729-1|AAD40475.1| 226|Homo sapiens DM domain-containing tr... 66 4e-11
AJ290954-1|CAC16590.1| 263|Homo sapiens putative DMO orthologue... 65 1e-10
AL365445-2|CAI22836.1| 342|Homo sapiens DMRT-like family B with... 64 2e-10
AK057273-1|BAB71407.1| 342|Homo sapiens protein ( Homo sapiens ... 64 2e-10
AJ291671-1|CAC40654.1| 336|Homo sapiens doublesex-mab-3 (DM) do... 64 2e-10
AK057404-1|BAB71473.1| 224|Homo sapiens protein ( Homo sapiens ... 64 3e-10
AJ301581-1|CAC37947.1| 124|Homo sapiens doublesex-mab-3 (DM) do... 52 8e-07
AK097358-1|BAC05015.1| 174|Homo sapiens protein ( Homo sapiens ... 33 0.50
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 30 3.5
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 30 3.5
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 30 3.5
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 30 3.5
AF149297-1|AAF34820.1| 704|Homo sapiens NAG-5 protein protein. 30 3.5
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 30 3.5
Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein. 30 4.6
BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein. 30 4.6
BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein. 30 4.6
U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated ... 29 8.1
U19260-1|AAA65732.1| 568|Homo sapiens LMP1 associated protein p... 29 8.1
U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein prot... 29 8.1
L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein p... 29 8.1
BC075087-1|AAH75087.1| 568|Homo sapiens TNF receptor-associated... 29 8.1
BC075086-1|AAH75086.1| 568|Homo sapiens TNF receptor-associated... 29 8.1
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 29 8.1
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 29 8.1
AL109827-22|CAI20134.1| 291|Homo sapiens RNA binding motif prot... 29 8.1
AL109827-21|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 29 8.1
AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens ... 29 8.1
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 29 8.1
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 29 8.1
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 29 8.1
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 29 8.1
AC005175-4|AAC24305.1| 813|Homo sapiens R31449_3 protein. 29 8.1
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 29 8.1
>BC117245-1|AAI17246.1| 472|Homo sapiens doublesex and mab-3
related transcription factor 3 protein.
Length = 472
Score = 85.4 bits (202), Expect = 9e-17
Identities = 49/120 (40%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 22 GASSSGVPRAP----PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
G S PRAP P CARCRNH + LKGHKRYC+++ CTCEKC L +RQRVMA Q
Sbjct: 12 GGPVSQPPRAPLQRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQ 71
Query: 78 TXXXXXXXXXXXXXXXLEL-----GIQPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSA 132
+ G PPG + P PP P P PP L +A
Sbjct: 72 VALRRQQANESLESLIPDSLRALPGPPPPGDAVAAPQPPPASQPSQPQ-PPRPAAELAAA 130
>BC113584-1|AAI13585.1| 472|Homo sapiens doublesex and mab-3
related transcription factor 3 protein.
Length = 472
Score = 85.4 bits (202), Expect = 9e-17
Identities = 49/120 (40%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 22 GASSSGVPRAP----PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
G S PRAP P CARCRNH + LKGHKRYC+++ CTCEKC L +RQRVMA Q
Sbjct: 12 GGPVSQPPRAPLQRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQ 71
Query: 78 TXXXXXXXXXXXXXXXLEL-----GIQPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSA 132
+ G PPG + P PP P P PP L +A
Sbjct: 72 VALRRQQANESLESLIPDSLRALPGPPPPGDAVAAPQPPPASQPSQPQ-PPRPAAELAAA 130
>AL136365-2|CAB99336.1| 472|Homo sapiens doublesex and mab-3
related transcription factor 3 protein.
Length = 472
Score = 85.4 bits (202), Expect = 9e-17
Identities = 49/120 (40%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 22 GASSSGVPRAP----PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
G S PRAP P CARCRNH + LKGHKRYC+++ CTCEKC L +RQRVMA Q
Sbjct: 12 GGPVSQPPRAPLQRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQ 71
Query: 78 TXXXXXXXXXXXXXXXLEL-----GIQPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSA 132
+ G PPG + P PP P P PP L +A
Sbjct: 72 VALRRQQANESLESLIPDSLRALPGPPPPGDAVAAPQPPPASQPSQPQ-PPRPAAELAAA 130
>BC130437-1|AAI30438.1| 504|Homo sapiens DMRT-like family A1
protein.
Length = 504
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 22 GASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
GA G PR P CARCRNH + LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 85 GAVGCGYPRTP-KCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>BC130435-1|AAI30436.1| 504|Homo sapiens DMRT-like family A1
protein.
Length = 504
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 22 GASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
GA G PR P CARCRNH + LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 85 GAVGCGYPRTP-KCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>AL161730-1|CAH73857.1| 504|Homo sapiens DMRT-like family A1
protein.
Length = 504
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 22 GASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
GA G PR P CARCRNH + LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 85 GAVGCGYPRTP-KCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>AK096011-1|BAC04672.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ38692 fis, clone KIDNE2001713, weakly similar to
Oreochromis niloticus sex-determining protein DMO mRNA.
).
Length = 504
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 22 GASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
GA G PR P CARCRNH + LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 85 GAVGCGYPRTP-KCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 139
>BC040847-1|AAH40847.1| 373|Homo sapiens doublesex and mab-3
related transcription factor 1 protein.
Length = 373
Score = 75.8 bits (178), Expect = 7e-14
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 19 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
S+ GA S PR P CARCRNH LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 61 SDLGAGSKKSPRLP-KCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AY442915-1|AAR89620.1| 175|Homo sapiens doublesex and mab-3
related transcription factor 1 c protein.
Length = 175
Score = 75.8 bits (178), Expect = 7e-14
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 19 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
S+ GA S PR P CARCRNH LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 61 SDLGAGSKKSPRLP-KCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AY442914-1|AAR89619.1| 275|Homo sapiens doublesex and mab-3
related transcription factor 1 b protein.
Length = 275
Score = 75.8 bits (178), Expect = 7e-14
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 19 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
S+ GA S PR P CARCRNH LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 61 SDLGAGSKKSPRLP-KCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AL162131-1|CAB82427.1| 373|Homo sapiens human DMRT1 protein
related to Drosophila doublesex protein.
Length = 373
Score = 75.8 bits (178), Expect = 7e-14
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 19 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
S+ GA S PR P CARCRNH LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 61 SDLGAGSKKSPRLP-KCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AL136365-1|CAB99335.1| 373|Homo sapiens doublesex and mab-3
related transcription factor 1 protein.
Length = 373
Score = 75.8 bits (178), Expect = 7e-14
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 19 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
S+ GA S PR P CARCRNH LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 61 SDLGAGSKKSPRLP-KCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AJ276801-1|CAB82851.1| 373|Homo sapiens doublesex and MAB-3
related transcription factor 1 protein.
Length = 373
Score = 75.8 bits (178), Expect = 7e-14
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 19 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
S+ GA S PR P CARCRNH LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 61 SDLGAGSKKSPRLP-KCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AF130728-1|AAD40474.1| 373|Homo sapiens doublesex and mab-3
related transcription factor 1 protein.
Length = 373
Score = 75.8 bits (178), Expect = 7e-14
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 19 SEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
S+ GA S PR P CARCRNH LKGHKR+C ++ C C+KC L A+RQRVMA Q
Sbjct: 61 SDLGAGSKKSPRLP-KCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 118
>AF193872-1|AAF78891.1| 57|Homo sapiens putative DM domain
protein protein.
Length = 57
Score = 74.1 bits (174), Expect = 2e-13
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
P CARCRNH + LKGHKRYC+++ CTCEKC L +RQRVMA Q
Sbjct: 3 PKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQ 47
>AJ301580-1|CAC37946.1| 486|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 486
Score = 72.9 bits (171), Expect = 5e-13
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 29 PRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
PR P CARCRNH + LKGHKRYC+++ C C KC L A+RQRVMA Q
Sbjct: 9 PRTP-KCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQ 56
>Y19052-1|CAB59891.1| 226|Homo sapiens doublesex-like 2 protein
protein.
Length = 226
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>BC039266-1|AAH39266.1| 367|Homo sapiens DMRT-like family C2
protein.
Length = 367
Score = 66.5 bits (155), Expect = 4e-11
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
P CARCRNH + LKGHKR C +Q C C KC L +R+RVMA Q
Sbjct: 40 PTCARCRNHGVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ 84
>BC030204-1|AAH30204.1| 226|Homo sapiens DMRT2 protein protein.
Length = 226
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>BC029202-1|AAH29202.1| 367|Homo sapiens DMRT-like family C2
protein.
Length = 367
Score = 66.5 bits (155), Expect = 4e-11
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
P CARCRNH + LKGHKR C +Q C C KC L +R+RVMA Q
Sbjct: 40 PTCARCRNHGVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ 84
>AL358976-3|CAH70589.1| 561|Homo sapiens doublesex and mab-3
related transcription factor 2 protein.
Length = 561
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>AL358976-2|CAH70588.1| 226|Homo sapiens doublesex and mab-3
related transcription factor 2 protein.
Length = 226
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>AJ291669-1|CAC40652.1| 333|Homo sapiens Doublesex-mab-3 (DM)
domain protein.
Length = 333
Score = 66.5 bits (155), Expect = 4e-11
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
P CARCRNH + LKGHKR C +Q C C KC L +R+RVMA Q
Sbjct: 6 PTCARCRNHGVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ 50
>AF284225-1|AAF86295.1| 561|Homo sapiens DMRT2/terra-like protein
protein.
Length = 561
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>AF284224-1|AAF86293.1| 226|Homo sapiens DMRT2 protein.
Length = 226
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>AF284223-1|AAF86291.1| 226|Homo sapiens DMRT2 protein.
Length = 226
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>AF130729-1|AAD40475.1| 226|Homo sapiens DM domain-containing
transcription factor DMRT2 protein.
Length = 226
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 17 ERSEPGASSSGVPRA---PPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRV 73
ER P A PR P CARCRNH + LKGHKR+C+++ C C C L +RQRV
Sbjct: 103 ERCTP-AGGGAEPRKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRV 161
Query: 74 MAKQ 77
MA Q
Sbjct: 162 MAAQ 165
>AJ290954-1|CAC16590.1| 263|Homo sapiens putative DMO orthologue
protein.
Length = 263
Score = 64.9 bits (151), Expect = 1e-10
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 36 ARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
ARCRNH + LKGHKR+C+++ C C KC L A+RQRVMA Q
Sbjct: 1 ARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQ 42
>AL365445-2|CAI22836.1| 342|Homo sapiens DMRT-like family B with
proline-rich C-terminal, 1 protein.
Length = 342
Score = 64.5 bits (150), Expect = 2e-10
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXX 92
P C+RCRNH + +KGH C+++ C CEKC L ++RQ++MA Q
Sbjct: 9 PKCSRCRNHGFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQKVLKTQAAEEEQEAA 68
Query: 93 XLELG-IQPPGLELDRPVP-PVVKAPRSPMIP 122
G Q G P P PV A P+ P
Sbjct: 69 LCAQGPKQASGAAAAAPAPVPVPAASLRPLSP 100
>AK057273-1|BAB71407.1| 342|Homo sapiens protein ( Homo sapiens
cDNA FLJ32711 fis, clone TESTI2000707, weakly similar to
DOUBLESEX PROTEIN, MALE-SPECIFIC. ).
Length = 342
Score = 64.5 bits (150), Expect = 2e-10
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXX 92
P C+RCRNH + +KGH C+++ C CEKC L ++RQ++MA Q
Sbjct: 9 PKCSRCRNHGFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQKVLKTQAAEEEQEAA 68
Query: 93 XLELG-IQPPGLELDRPVP-PVVKAPRSPMIP 122
G Q G P P PV A P+ P
Sbjct: 69 LCAQGPKQASGAAAAAPAPVPVPAASLRPLSP 100
>AJ291671-1|CAC40654.1| 336|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 336
Score = 64.5 bits (150), Expect = 2e-10
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXX 92
P C+RCRNH + +KGH C+++ C CEKC L ++RQ++MA Q
Sbjct: 3 PKCSRCRNHGFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQKVLKTQAAEEEQEAA 62
Query: 93 XLELG-IQPPGLELDRPVP-PVVKAPRSPMIP 122
G Q G P P PV A P+ P
Sbjct: 63 LCAQGPKQASGAAAAAPAPVPVPAASLRPLSP 94
>AK057404-1|BAB71473.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ32842 fis, clone TESTI2003327, weakly similar
to Testis-specific protein. ).
Length = 224
Score = 63.7 bits (148), Expect = 3e-10
Identities = 26/45 (57%), Positives = 30/45 (66%)
Query: 33 PNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQ 77
P CARCRNH + LKGHKR C +Q C C KC +R+RVMA Q
Sbjct: 40 PTCARCRNHGVTAHLKGHKRLCLFQACECHKCVHILERRRVMAAQ 84
>AJ301581-1|CAC37947.1| 124|Homo sapiens doublesex-mab-3 (DM)
domain protein.
Length = 124
Score = 52.4 bits (120), Expect = 8e-07
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 52 RYCKYQHCTCEKCRLTADRQRVMAKQTXXXXXXXXXXXXXXXLEL-----GIQPPGLELD 106
RYC+++ CTCEKC L +RQRVMA Q + G PPG +
Sbjct: 1 RYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLESLIPDSLRALPGPPPPGDAVA 60
Query: 107 RPVPPVVKAPRSPMIPPSAPRSLGSA 132
P PP P P PP L +A
Sbjct: 61 APQPPPASQPSQPQ-PPRPAAELAAA 85
>AK097358-1|BAC05015.1| 174|Homo sapiens protein ( Homo sapiens
cDNA FLJ40039 fis, clone SYNOV2000397. ).
Length = 174
Score = 33.1 bits (72), Expect = 0.50
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 15 CEERSEPGASSSGVPRAPPNC 35
C E S PGA SSG+P PP C
Sbjct: 77 CLEASGPGAHSSGIPSGPPPC 97
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 100 PPGLELDRPVPPVVKAPRSPMI--PPSAP 126
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 100 PPGLELDRPVPPVVKAPRSPMI--PPSAP 126
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 100 PPGLELDRPVPPVVKAPRSPMI--PPSAP 126
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 100 PPGLELDRPVPPVVKAPRSPMI--PPSAP 126
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>AF149297-1|AAF34820.1| 704|Homo sapiens NAG-5 protein protein.
Length = 704
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 11 VPDDCEERSEPGASSSGVPRAPPNCARCRNH 41
+P RS PG +S PR PP AR R+H
Sbjct: 18 IPAGSAXRSRPGLNSYPGPRPPPRPARHRSH 48
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 100 PPGLELDRPVPPVVKAPRSPMI--PPSAP 126
PPG + P+PP++ APR ++ PPSAP
Sbjct: 609 PPGSVI-APMPPIIHAPRINVVPMPPSAP 636
>Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein.
Length = 432
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 97 GIQPPGLELDR--PVPPVVKAPRSPMIPPSAPRSLG 130
G QPPGL ++ P PP P P +PPS+P + G
Sbjct: 104 GSQPPGLNSEQQPPQPP----PPPPTLPPSSPTNPG 135
>BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 97 GIQPPGLELDR--PVPPVVKAPRSPMIPPSAPRSLG 130
G QPPGL ++ P PP P P +PPS+P + G
Sbjct: 104 GSQPPGLNSEQQPPQPP----PPPPTLPPSSPTNPG 135
>BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 97 GIQPPGLELDR--PVPPVVKAPRSPMIPPSAPRSLG 130
G QPPGL ++ P PP P P +PPS+P + G
Sbjct: 104 GSQPPGLNSEQQPPQPP----PPPPTLPPSSPTNPG 135
>U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated
factor 1 protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 CAR--CRNHRLKIELKGH-KRYCKYQHCTCEKCR 65
C R C+ L+ +L+ H ++ CKY+ TC C+
Sbjct: 148 CVRPDCKEKVLRKDLRDHVEKACKYREATCSHCK 181
>U19260-1|AAA65732.1| 568|Homo sapiens LMP1 associated protein
protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 CAR--CRNHRLKIELKGH-KRYCKYQHCTCEKCR 65
C R C+ L+ +L+ H ++ CKY+ TC C+
Sbjct: 148 CVRPDCKEKVLRKDLRDHVEKACKYREATCSHCK 181
>U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein
protein.
Length = 567
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 CAR--CRNHRLKIELKGH-KRYCKYQHCTCEKCR 65
C R C+ L+ +L+ H ++ CKY+ TC C+
Sbjct: 147 CVRPDCKEKVLRKDLRDHVEKACKYREATCSHCK 180
>L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein
protein.
Length = 543
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 CAR--CRNHRLKIELKGH-KRYCKYQHCTCEKCR 65
C R C+ L+ +L+ H ++ CKY+ TC C+
Sbjct: 148 CVRPDCKEKVLRKDLRDHVEKACKYREATCSHCK 181
>BC075087-1|AAH75087.1| 568|Homo sapiens TNF receptor-associated
factor 3 protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 CAR--CRNHRLKIELKGH-KRYCKYQHCTCEKCR 65
C R C+ L+ +L+ H ++ CKY+ TC C+
Sbjct: 148 CVRPDCKEKVLRKDLRDHVEKACKYREATCSHCK 181
>BC075086-1|AAH75086.1| 568|Homo sapiens TNF receptor-associated
factor 3 protein.
Length = 568
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 CAR--CRNHRLKIELKGH-KRYCKYQHCTCEKCR 65
C R C+ L+ +L+ H ++ CKY+ TC C+
Sbjct: 148 CVRPDCKEKVLRKDLRDHVEKACKYREATCSHCK 181
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>AL109827-22|CAI20134.1| 291|Homo sapiens RNA binding motif protein
12 protein.
Length = 291
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>AL109827-21|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>AK091050-1|BAC03574.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ33731 fis, clone BRAWH2017685, moderately
similar to Mus musculus mRNA for nuclear protein ZAP. ).
Length = 723
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 1 MVSMGSWKRRVPDDCEERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKR 52
+V GS + +VP + + GA+ S R PP R L I L GH++
Sbjct: 652 LVRPGSSREKVPGGLQGSQDRGAAGSR-ERGPPRGPGSRERGLGITLAGHQK 702
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 211 PPPVPTLPPVPPVPPIPPVPSVPPMTP 237
>AC005175-4|AAC24305.1| 813|Homo sapiens R31449_3 protein.
Length = 813
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSA 132
PPG P PV +PR P PP P S G++
Sbjct: 752 PPGPPEGHPTSPVT-SPRPPTAPPRHPASSGNS 783
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 100 PPGLELDRPVPPVVKAPRSPMIPPSAP 126
PP + PVPPV P P +PP P
Sbjct: 231 PPPVPTLPPVPPVPPIPPVPSVPPMTP 257
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.134 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,850,141
Number of Sequences: 224733
Number of extensions: 808403
Number of successful extensions: 5137
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 5025
Number of HSP's gapped (non-prelim): 131
length of query: 169
length of database: 73,234,838
effective HSP length: 85
effective length of query: 84
effective length of database: 54,132,533
effective search space: 4547132772
effective search space used: 4547132772
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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