GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005103-TA|BGIBMGA005103-PA|undefined
         (127 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036667-1|AAH36667.1|  874|Homo sapiens coiled-coil domain cont...    30   2.0  
AK093035-1|BAC04026.1|  809|Homo sapiens protein ( Homo sapiens ...    30   2.0  
AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein pr...    29   4.5  
AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.     29   4.5  
AF528529-1|AAM94279.1|  502|Homo sapiens hypothetical protein pr...    29   6.0  
M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.    28   7.9  
BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,...    28   7.9  
BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,...    28   7.9  
AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein p...    28   7.9  

>BC036667-1|AAH36667.1|  874|Homo sapiens coiled-coil domain
           containing 135 protein.
          Length = 874

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 10  RFETSQELNATEELE-EQKKSMRPKSERAKKSKGATQKWMMGLLLYNTCLAPLSG 63
           RFE  QE+   +E+  ++KK +R + ER  +++ A    + GL +++  L  LSG
Sbjct: 257 RFEQEQEVKKQQEIRAQEKKRLREEEERLMEAEKAKPDALHGLRVHSWVLV-LSG 310


>AK093035-1|BAC04026.1|  809|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35716 fis, clone TESTI2000431. ).
          Length = 809

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)

Query: 10  RFETSQELNATEELE-EQKKSMRPKSERAKKSKGATQKWMMGLLLYNTCLAPLSG 63
           RFE  QE+   +E+  ++KK +R + ER  +++ A    + GL +++  L  LSG
Sbjct: 192 RFEQEQEVKKQQEIRAQEKKRLREEEERLMEAEKAKPDALHGLRVHSWVLV-LSG 245


>AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein
           protein.
          Length = 1033

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/51 (25%), Positives = 27/51 (52%)

Query: 1   MNTSSNRVLRFETSQELNATEELEEQKKSMRPKSERAKKSKGATQKWMMGL 51
           +  + N VLRF+TS  +   EEL+ +  +++ K + ++  +    K  + L
Sbjct: 221 LKCAQNEVLRFQTSHSVTQNEELKSRLCTLQKKYDTSQDEQNELLKMQLQL 271


>AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.
          Length = 1270

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/51 (25%), Positives = 27/51 (52%)

Query: 1   MNTSSNRVLRFETSQELNATEELEEQKKSMRPKSERAKKSKGATQKWMMGL 51
           +  + N VLRF+TS  +   EEL+ +  +++ K + ++  +    K  + L
Sbjct: 461 LKCAQNEVLRFQTSHSVTQNEELKSRLCTLQKKYDTSQDEQNELLKMQLQL 511


>AF528529-1|AAM94279.1|  502|Homo sapiens hypothetical protein
           protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/41 (31%), Positives = 24/41 (58%)

Query: 6   NRVLRFETSQELNATEELEEQKKSMRPKSERAKKSKGATQK 46
           N+ ++ E+S++ N + +  E+K     K ER K+ K  T+K
Sbjct: 304 NKDVQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEK 344


>M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.
          Length = 1976

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 5    SNRVLRFETSQELNATE---ELEEQKKSMRPKSERAKKSKGATQKWMMGL 51
            +  +L+ ET Q+LN +    +LEE+K S++ + E  ++++   +K ++ L
Sbjct: 1320 TQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLAL 1369


>BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,
            non-muscle protein.
          Length = 1976

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 5    SNRVLRFETSQELNATE---ELEEQKKSMRPKSERAKKSKGATQKWMMGL 51
            +  +L+ ET Q+LN +    +LEE+K S++ + E  ++++   +K ++ L
Sbjct: 1320 TQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLAL 1369


>BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,
            non-muscle protein.
          Length = 1976

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 5    SNRVLRFETSQELNATE---ELEEQKKSMRPKSERAKKSKGATQKWMMGL 51
            +  +L+ ET Q+LN +    +LEE+K S++ + E  ++++   +K ++ L
Sbjct: 1320 TQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLAL 1369


>AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein
            protein.
          Length = 2018

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 5    SNRVLRFETSQELNATE---ELEEQKKSMRPKSERAKKSKGATQKWMMGL 51
            +  +L+ ET Q+LN +    +LEE+K S++ + E  ++++   +K ++ L
Sbjct: 1362 TQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLAL 1411


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.129    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,003,336
Number of Sequences: 224733
Number of extensions: 719528
Number of successful extensions: 2576
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2565
Number of HSP's gapped (non-prelim): 17
length of query: 127
length of database: 73,234,838
effective HSP length: 81
effective length of query: 46
effective length of database: 55,031,465
effective search space: 2531447390
effective search space used: 2531447390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)